Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 MIR548AR-201ENST00000582191 57 ntBASIC1.21□□□□□ -2.22
ZNF440Q8IYI8 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
ZNF440Q8IYI8 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
ZNF440Q8IYI8 Y_RNA.120-201ENST00000363304 110 ntBASIC1.2□□□□□ -2.22
ZNF440Q8IYI8 SNORD113-1-201ENST00000365321 69 ntBASIC1.2□□□□□ -2.22
ZNF440Q8IYI8 SNORA2.2-201ENST00000365473 135 ntBASIC1.2□□□□□ -2.22
ZNF440Q8IYI8 Y_RNA.410-201ENST00000383992 113 ntBASIC1.2□□□□□ -2.22
ZNF440Q8IYI8 Y_RNA.525-201ENST00000384570 113 ntBASIC1.2□□□□□ -2.22
ZNF440Q8IYI8 MIR30A-201ENST00000385092 71 ntBASIC1.2□□□□□ -2.22
ZNF440Q8IYI8 MIR513A1-201ENST00000385138 129 ntBASIC1.2□□□□□ -2.22
ZNF440Q8IYI8 MIR1267-201ENST00000408723 78 ntBASIC1.2□□□□□ -2.22
ZNF440Q8IYI8 RNU1-123P-201ENST00000458950 160 ntBASIC1.2□□□□□ -2.22
ZNF440Q8IYI8 Y_RNA.651-201ENST00000459380 103 ntBASIC1.2□□□□□ -2.22
ZNF440Q8IYI8 SNORD123-201ENST00000459473 70 ntBASIC1.2□□□□□ -2.22
ZNF440Q8IYI8 RPS26P48-201ENST00000491713 339 ntBASIC1.2□□□□□ -2.22
ZNF440Q8IYI8 RNU5E-3P-201ENST00000515913 68 ntBASIC1.2□□□□□ -2.22
ZNF440Q8IYI8 SNORA31.4-201ENST00000516049 129 ntBASIC1.2□□□□□ -2.22
ZNF440Q8IYI8 Y_RNA.690-201ENST00000516603 95 ntBASIC1.2□□□□□ -2.22
ZNF440Q8IYI8 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.2□□□□□ -2.22
ZNF440Q8IYI8 AC011603.4-201ENST00000611325 277 ntBASIC1.2□□□□□ -2.22
ZNF440Q8IYI8 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
ZNF440Q8IYI8 RNU6-235P-201ENST00000362644 107 ntBASIC1.19□□□□□ -2.22
ZNF440Q8IYI8 Y_RNA.241-201ENST00000364470 117 ntBASIC1.19□□□□□ -2.22
ZNF440Q8IYI8 AC087499.4-201ENST00000448505 178 ntBASIC1.19□□□□□ -2.22
ZNF440Q8IYI8 AC015688.6-201ENST00000577737 104 ntBASIC1.19□□□□□ -2.22
ZNF440Q8IYI8 MIR3121-201ENST00000579680 77 ntBASIC1.19□□□□□ -2.22
ZNF440Q8IYI8 MIR4298-201ENST00000584380 73 ntBASIC1.19□□□□□ -2.22
ZNF440Q8IYI8 AC108081.1-201ENST00000604358 221 ntBASIC1.19□□□□□ -2.22
ZNF440Q8IYI8 AL365222.1-201ENST00000614661 98 ntBASIC1.19□□□□□ -2.22
ZNF440Q8IYI8 MIR8074-201ENST00000615081 81 ntBASIC1.19□□□□□ -2.22
ZNF440Q8IYI8 MIR7843-201ENST00000622274 79 ntBASIC1.19□□□□□ -2.22
ZNF440Q8IYI8 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.19□□□□□ -2.22
ZNF440Q8IYI8 MIR342-201ENST00000362212 99 ntBASIC1.18□□□□□ -2.22
ZNF440Q8IYI8 Y_RNA.71-201ENST00000362892 104 ntBASIC1.18□□□□□ -2.22
ZNF440Q8IYI8 Y_RNA.261-201ENST00000364631 102 ntBASIC1.18□□□□□ -2.22
ZNF440Q8IYI8 MIR764-201ENST00000390811 85 ntBASIC1.18□□□□□ -2.22
ZNF440Q8IYI8 AL603914.1-201ENST00000401964 204 ntBASIC1.18□□□□□ -2.22
ZNF440Q8IYI8 RNU7-107P-201ENST00000459121 61 ntBASIC1.18□□□□□ -2.22
ZNF440Q8IYI8 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.18□□□□□ -2.22
ZNF440Q8IYI8 AC090821.2-201ENST00000523552 176 ntBASIC1.18□□□□□ -2.22
ZNF440Q8IYI8 AC015712.3-201ENST00000559380 164 ntBASIC1.18□□□□□ -2.22
ZNF440Q8IYI8 HSPE1P19-201ENST00000603327 295 ntBASIC1.18□□□□□ -2.22
ZNF440Q8IYI8 AL022345.2-201ENST00000606307 135 ntBASIC1.18□□□□□ -2.22
ZNF440Q8IYI8 U7.2-201ENST00000607576 63 ntBASIC1.18□□□□□ -2.22
ZNF440Q8IYI8 TUG1_4.1-201ENST00000619464 181 ntBASIC1.18□□□□□ -2.22
ZNF440Q8IYI8 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
ZNF440Q8IYI8 Y_RNA.114-201ENST00000363265 113 ntBASIC1.17□□□□□ -2.22
ZNF440Q8IYI8 Y_RNA.280-201ENST00000364765 112 ntBASIC1.17□□□□□ -2.22
ZNF440Q8IYI8 Y_RNA.351-201ENST00000365436 96 ntBASIC1.17□□□□□ -2.22
ZNF440Q8IYI8 Y_RNA.370-201ENST00000365589 108 ntBASIC1.17□□□□□ -2.22
ZNF440Q8IYI8 SNORD18B-201ENST00000365659 72 ntBASIC1.17□□□□□ -2.22
ZNF440Q8IYI8 SNORA27-201ENST00000384323 126 ntBASIC1.17□□□□□ -2.22
ZNF440Q8IYI8 MIR653-201ENST00000385279 96 ntBASIC1.17□□□□□ -2.22
ZNF440Q8IYI8 SNORD41-201ENST00000386967 70 ntBASIC1.17□□□□□ -2.22
ZNF440Q8IYI8 SNORA40.5-201ENST00000391061 128 ntBASIC1.17□□□□□ -2.22
ZNF440Q8IYI8 SNX2P2-201ENST00000424553 323 ntBASIC1.17□□□□□ -2.22
ZNF440Q8IYI8 AC009474.2-201ENST00000451383 136 ntBASIC1.17□□□□□ -2.22
ZNF440Q8IYI8 RPS29P23-201ENST00000458635 123 ntBASIC1.17□□□□□ -2.22
ZNF440Q8IYI8 RNU6-922P-201ENST00000516753 99 ntBASIC1.17□□□□□ -2.22
ZNF440Q8IYI8 IGKV1-22-201ENST00000524313 326 ntBASIC1.17□□□□□ -2.22
ZNF440Q8IYI8 AC068338.1-201ENST00000565567 176 ntBASIC1.17□□□□□ -2.22
ZNF440Q8IYI8 MIR4421-201ENST00000578133 69 ntBASIC1.17□□□□□ -2.22
ZNF440Q8IYI8 AL353997.5-201ENST00000618886 171 ntBASIC1.17□□□□□ -2.22
ZNF440Q8IYI8 MIR8063-201ENST00000621930 81 ntBASIC1.17□□□□□ -2.22
ZNF440Q8IYI8 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.17□□□□□ -2.22
ZNF440Q8IYI8 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.17□□□□□ -2.22
ZNF440Q8IYI8 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
ZNF440Q8IYI8 MIR302D-201ENST00000362275 68 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 SNORD115-34-201ENST00000362441 82 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 SNORD115-12-201ENST00000362583 82 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 SNORD115-29-201ENST00000362834 82 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 SNORD115-9-201ENST00000362912 82 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 SNORD115-21-201ENST00000362963 81 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 SNORD115-14-201ENST00000363090 81 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 SNORD115-13-201ENST00000363358 82 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 SNORD115-41-201ENST00000363608 82 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 SNORD115-11-201ENST00000363616 82 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 SNORD115-5-201ENST00000363633 82 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 SNORD115-39-201ENST00000363694 82 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 SNORD115-4-201ENST00000363810 82 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 SNORD115-16-201ENST00000363887 82 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 SNORD115-6-201ENST00000363942 82 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 SNORD115-42-201ENST00000364273 82 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 SNORD115-15-201ENST00000364809 81 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 SNORD115-1-201ENST00000364961 82 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 SNORD115-26-201ENST00000365067 82 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 SNORD115-10-201ENST00000365073 81 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 SNORD115-43-201ENST00000365503 82 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 SNORD115-36-201ENST00000365629 82 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 SNORA40.6-201ENST00000391153 128 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 RNU2-13P-201ENST00000515909 113 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 Y_RNA.692-201ENST00000516627 105 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 SNORA74.3-201ENST00000517108 154 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 AC090049.2-201ENST00000550377 109 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 MIR3660-201ENST00000584845 100 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 SNORD115-40-201ENST00000606510 82 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 AC091932.4-201ENST00000623386 200 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 AL161722.3-201ENST00000605789 2983 ntBASIC1.16□□□□□ -2.22
ZNF440Q8IYI8 RNU6-22P-201ENST00000384355 107 ntBASIC1.15□□□□□ -2.23
ZNF440Q8IYI8 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms