Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 RNU6-1132P-201ENST00000459214 107 ntBASIC0.87□□□□□ -2.27
CCDC60Q8IWA6 RNU6-351P-201ENST00000516097 100 ntBASIC0.87□□□□□ -2.27
CCDC60Q8IWA6 RNU6-504P-201ENST00000516568 104 ntBASIC0.87□□□□□ -2.27
CCDC60Q8IWA6 RNU11-2P-201ENST00000516898 142 ntBASIC0.87□□□□□ -2.27
CCDC60Q8IWA6 MIR5000-201ENST00000577717 103 ntBASIC0.87□□□□□ -2.27
CCDC60Q8IWA6 RNU6-94P-201ENST00000607728 107 ntBASIC0.87□□□□□ -2.27
CCDC60Q8IWA6 AL442067.1-201ENST00000613261 223 ntBASIC0.87□□□□□ -2.27
CCDC60Q8IWA6 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
CCDC60Q8IWA6 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 SNORD115-34-201ENST00000362441 82 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 SNORD115-12-201ENST00000362583 82 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 Y_RNA.37-201ENST00000362606 108 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 SNORD115-29-201ENST00000362834 82 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 SNORD115-9-201ENST00000362912 82 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 SNORD115-21-201ENST00000362963 81 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 SNORD115-14-201ENST00000363090 81 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 SNORD115-13-201ENST00000363358 82 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 SNORD115-41-201ENST00000363608 82 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 SNORD115-11-201ENST00000363616 82 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 SNORD115-5-201ENST00000363633 82 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 SNORD115-39-201ENST00000363694 82 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 SNORD115-4-201ENST00000363810 82 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 SNORD115-16-201ENST00000363887 82 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 SNORD115-6-201ENST00000363942 82 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 SNORD115-42-201ENST00000364273 82 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 Y_RNA.262-201ENST00000364641 102 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 SNORD115-15-201ENST00000364809 81 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 Y_RNA.634-201ENST00000364811 113 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 Y_RNA.292-201ENST00000364904 97 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 SNORD115-1-201ENST00000364961 82 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 SNORD115-26-201ENST00000365067 82 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 SNORD115-10-201ENST00000365073 81 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 SNORD115-43-201ENST00000365503 82 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 SNORD115-36-201ENST00000365629 82 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 SNORA2B-201ENST00000384583 137 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 RNU6-381P-201ENST00000391259 108 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 SNORA26-201ENST00000391286 122 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 AC087499.4-201ENST00000448505 178 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 RNU2-13P-201ENST00000515909 113 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 MIR2115-201ENST00000516657 100 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 SNORD36C-201ENST00000516733 66 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 RNU6-958P-201ENST00000516995 106 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 AP003484.1-201ENST00000530974 250 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 SNORD115-40-201ENST00000606510 82 ntBASIC0.86□□□□□ -2.27
CCDC60Q8IWA6 RNU6-888P-201ENST00000363010 101 ntBASIC0.85□□□□□ -2.27
CCDC60Q8IWA6 RNU6-653P-201ENST00000363074 106 ntBASIC0.85□□□□□ -2.27
CCDC60Q8IWA6 SNORD45.3-201ENST00000363836 72 ntBASIC0.85□□□□□ -2.27
CCDC60Q8IWA6 RNU6-396P-201ENST00000365369 105 ntBASIC0.85□□□□□ -2.27
CCDC60Q8IWA6 RNU6-484P-201ENST00000384016 107 ntBASIC0.85□□□□□ -2.27
CCDC60Q8IWA6 RNY3P5-201ENST00000384127 102 ntBASIC0.85□□□□□ -2.27
CCDC60Q8IWA6 Y_RNA.556-201ENST00000384677 113 ntBASIC0.85□□□□□ -2.27
CCDC60Q8IWA6 RNU6-1228P-201ENST00000391014 107 ntBASIC0.85□□□□□ -2.27
CCDC60Q8IWA6 RNU6-994P-201ENST00000410507 111 ntBASIC0.85□□□□□ -2.27
CCDC60Q8IWA6 RNU6-938P-201ENST00000411285 103 ntBASIC0.85□□□□□ -2.27
CCDC60Q8IWA6 SNRPGP8-201ENST00000454064 226 ntBASIC0.85□□□□□ -2.27
CCDC60Q8IWA6 SNORA18.4-201ENST00000516440 124 ntBASIC0.85□□□□□ -2.27
CCDC60Q8IWA6 AC036111.3-201ENST00000526389 112 ntBASIC0.85□□□□□ -2.27
CCDC60Q8IWA6 AC013244.2-201ENST00000603396 103 ntBASIC0.85□□□□□ -2.27
CCDC60Q8IWA6 AC134878.1-201ENST00000619901 243 ntBASIC0.85□□□□□ -2.27
CCDC60Q8IWA6 AC099654.10-201ENST00000640395 161 ntBASIC0.85□□□□□ -2.27
CCDC60Q8IWA6 Y_RNA.65-201ENST00000362846 100 ntBASIC0.84□□□□□ -2.27
CCDC60Q8IWA6 Y_RNA.66-201ENST00000362862 102 ntBASIC0.84□□□□□ -2.27
CCDC60Q8IWA6 RNU1-36P-201ENST00000365130 165 ntBASIC0.84□□□□□ -2.27
CCDC60Q8IWA6 RNU2-55P-201ENST00000411146 174 ntBASIC0.84□□□□□ -2.27
CCDC60Q8IWA6 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.84□□□□□ -2.27
CCDC60Q8IWA6 RNY3P16-201ENST00000516338 101 ntBASIC0.84□□□□□ -2.27
CCDC60Q8IWA6 MIR4714-201ENST00000580728 77 ntBASIC0.84□□□□□ -2.27
CCDC60Q8IWA6 AP000942.4-201ENST00000604811 241 ntBASIC0.84□□□□□ -2.27
CCDC60Q8IWA6 AC106800.4-201ENST00000614905 153 ntBASIC0.84□□□□□ -2.27
CCDC60Q8IWA6 SNORD113.3-201ENST00000364630 78 ntBASIC0.83□□□□□ -2.28
CCDC60Q8IWA6 Y_RNA.308-201ENST00000365043 101 ntBASIC0.83□□□□□ -2.28
CCDC60Q8IWA6 SNORA27-201ENST00000384323 126 ntBASIC0.83□□□□□ -2.28
CCDC60Q8IWA6 SNORA40.5-201ENST00000391061 128 ntBASIC0.83□□□□□ -2.28
CCDC60Q8IWA6 AL078595.1-201ENST00000404458 226 ntBASIC0.83□□□□□ -2.28
CCDC60Q8IWA6 RPS3AP1-201ENST00000413190 320 ntBASIC0.83□□□□□ -2.28
CCDC60Q8IWA6 AF228730.3-201ENST00000436691 102 ntBASIC0.83□□□□□ -2.28
CCDC60Q8IWA6 FABP5P4-201ENST00000437203 171 ntBASIC0.83□□□□□ -2.28
CCDC60Q8IWA6 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.83□□□□□ -2.28
CCDC60Q8IWA6 RNU6-561P-201ENST00000516222 102 ntBASIC0.83□□□□□ -2.28
CCDC60Q8IWA6 AL353621.2-201ENST00000605340 133 ntBASIC0.83□□□□□ -2.28
CCDC60Q8IWA6 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CCDC60Q8IWA6 Y_RNA.562-201ENST00000384695 113 ntBASIC0.82□□□□□ -2.28
CCDC60Q8IWA6 RNU6-205P-201ENST00000390858 107 ntBASIC0.82□□□□□ -2.28
CCDC60Q8IWA6 SNORD89-201ENST00000390981 114 ntBASIC0.82□□□□□ -2.28
CCDC60Q8IWA6 RNU6-493P-201ENST00000391321 108 ntBASIC0.82□□□□□ -2.28
CCDC60Q8IWA6 SNORD111-201ENST00000408139 94 ntBASIC0.82□□□□□ -2.28
CCDC60Q8IWA6 RNU6-613P-201ENST00000410412 108 ntBASIC0.82□□□□□ -2.28
CCDC60Q8IWA6 MTND3P2-201ENST00000438452 342 ntBASIC0.82□□□□□ -2.28
CCDC60Q8IWA6 AL138752.1-201ENST00000452964 351 ntBASIC0.82□□□□□ -2.28
CCDC60Q8IWA6 AC067940.1-201ENST00000458411 300 ntBASIC0.82□□□□□ -2.28
CCDC60Q8IWA6 snoU13.16-201ENST00000459350 104 ntBASIC0.82□□□□□ -2.28
CCDC60Q8IWA6 RNA5SP436-201ENST00000516020 115 ntBASIC0.82□□□□□ -2.28
CCDC60Q8IWA6 Y_RNA.668-201ENST00000516233 93 ntBASIC0.82□□□□□ -2.28
CCDC60Q8IWA6 RNA5SP153-201ENST00000516498 76 ntBASIC0.82□□□□□ -2.28
CCDC60Q8IWA6 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.82□□□□□ -2.28
CCDC60Q8IWA6 AC011921.3-201ENST00000605540 361 ntBASIC0.82□□□□□ -2.28
CCDC60Q8IWA6 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.81□□□□□ -2.28
CCDC60Q8IWA6 RNU6-728P-201ENST00000365375 104 ntBASIC0.81□□□□□ -2.28
CCDC60Q8IWA6 Y_RNA.350-201ENST00000365409 98 ntBASIC0.81□□□□□ -2.28
CCDC60Q8IWA6 SNORA24-201ENST00000384096 131 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 195.5 ms