Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 SEPT7P4-201ENST00000437076 306 ntBASIC1.39□□□□□ -2.19
HERC6Q8IVU3 AL133373.1-201ENST00000497098 94 ntBASIC1.39□□□□□ -2.19
HERC6Q8IVU3 Y_RNA.662-201ENST00000516028 97 ntBASIC1.39□□□□□ -2.19
HERC6Q8IVU3 SNORA70.22-201ENST00000517160 124 ntBASIC1.39□□□□□ -2.19
HERC6Q8IVU3 AC098479.1-201ENST00000609225 154 ntBASIC1.39□□□□□ -2.19
HERC6Q8IVU3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
HERC6Q8IVU3 AL442644.1-201ENST00000454390 3105 ntBASIC1.38□□□□□ -2.19
HERC6Q8IVU3 Y_RNA.441-201ENST00000384123 112 ntBASIC1.38□□□□□ -2.19
HERC6Q8IVU3 SNORD61-201ENST00000384252 73 ntBASIC1.38□□□□□ -2.19
HERC6Q8IVU3 MIR548A2-201ENST00000384956 97 ntBASIC1.38□□□□□ -2.19
HERC6Q8IVU3 SNORA31.2-201ENST00000516019 134 ntBASIC1.38□□□□□ -2.19
HERC6Q8IVU3 RNA5SP153-201ENST00000516498 76 ntBASIC1.38□□□□□ -2.19
HERC6Q8IVU3 RNU6-197P-201ENST00000516680 100 ntBASIC1.38□□□□□ -2.19
HERC6Q8IVU3 MIR4431-201ENST00000579990 94 ntBASIC1.38□□□□□ -2.19
HERC6Q8IVU3 MIR4764-201ENST00000580680 88 ntBASIC1.38□□□□□ -2.19
HERC6Q8IVU3 MIR151B-201ENST00000584249 96 ntBASIC1.38□□□□□ -2.19
HERC6Q8IVU3 AC097639.2-201ENST00000603159 172 ntBASIC1.38□□□□□ -2.19
HERC6Q8IVU3 MIR6788-201ENST00000618842 66 ntBASIC1.38□□□□□ -2.19
HERC6Q8IVU3 AC015726.2-201ENST00000620112 122 ntBASIC1.38□□□□□ -2.19
HERC6Q8IVU3 Y_RNA.270-201ENST00000364693 104 ntBASIC1.37□□□□□ -2.19
HERC6Q8IVU3 Y_RNA.555-201ENST00000384673 110 ntBASIC1.37□□□□□ -2.19
HERC6Q8IVU3 MIR222-201ENST00000384992 110 ntBASIC1.37□□□□□ -2.19
HERC6Q8IVU3 RNU2-70P-201ENST00000410718 179 ntBASIC1.37□□□□□ -2.19
HERC6Q8IVU3 AC245047.7-201ENST00000440265 293 ntBASIC1.37□□□□□ -2.19
HERC6Q8IVU3 RNU6-365P-201ENST00000517113 106 ntBASIC1.37□□□□□ -2.19
HERC6Q8IVU3 AL160236.1-201ENST00000556317 195 ntBASIC1.37□□□□□ -2.19
HERC6Q8IVU3 AC019288.1-201ENST00000557918 224 ntBASIC1.37□□□□□ -2.19
HERC6Q8IVU3 MIR6767-201ENST00000637302 66 ntBASIC1.37□□□□□ -2.19
HERC6Q8IVU3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
HERC6Q8IVU3 RNA5SP325-201ENST00000363756 130 ntBASIC1.36□□□□□ -2.19
HERC6Q8IVU3 RNU6-643P-201ENST00000384018 107 ntBASIC1.36□□□□□ -2.19
HERC6Q8IVU3 RNU6-342P-201ENST00000384521 104 ntBASIC1.36□□□□□ -2.19
HERC6Q8IVU3 Y_RNA.547-201ENST00000384654 119 ntBASIC1.36□□□□□ -2.19
HERC6Q8IVU3 MIR598-201ENST00000384868 97 ntBASIC1.36□□□□□ -2.19
HERC6Q8IVU3 MIR150-201ENST00000385048 84 ntBASIC1.36□□□□□ -2.19
HERC6Q8IVU3 U8.17-201ENST00000391292 132 ntBASIC1.36□□□□□ -2.19
HERC6Q8IVU3 MIR548J-201ENST00000408833 112 ntBASIC1.36□□□□□ -2.19
HERC6Q8IVU3 RNU6-394P-201ENST00000410735 107 ntBASIC1.36□□□□□ -2.19
HERC6Q8IVU3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.36□□□□□ -2.19
HERC6Q8IVU3 RPS29P29-201ENST00000456396 171 ntBASIC1.36□□□□□ -2.19
HERC6Q8IVU3 AC107297.1-201ENST00000459991 176 ntBASIC1.36□□□□□ -2.19
HERC6Q8IVU3 RNU6-693P-201ENST00000516134 107 ntBASIC1.36□□□□□ -2.19
HERC6Q8IVU3 RNU7-25P-201ENST00000516544 62 ntBASIC1.36□□□□□ -2.19
HERC6Q8IVU3 RNA5SP327-201ENST00000362494 101 ntBASIC1.35□□□□□ -2.19
HERC6Q8IVU3 Y_RNA.180-201ENST00000363867 113 ntBASIC1.35□□□□□ -2.19
HERC6Q8IVU3 RNA5SP48-201ENST00000363969 126 ntBASIC1.35□□□□□ -2.19
HERC6Q8IVU3 RNU4-84P-201ENST00000364200 139 ntBASIC1.35□□□□□ -2.19
HERC6Q8IVU3 RNU6-978P-201ENST00000364371 103 ntBASIC1.35□□□□□ -2.19
HERC6Q8IVU3 RNU6-818P-201ENST00000364837 108 ntBASIC1.35□□□□□ -2.19
HERC6Q8IVU3 SNORA1-201ENST00000384107 130 ntBASIC1.35□□□□□ -2.19
HERC6Q8IVU3 MIR518F-201ENST00000384973 87 ntBASIC1.35□□□□□ -2.19
HERC6Q8IVU3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.35□□□□□ -2.19
HERC6Q8IVU3 AC006461.1-201ENST00000412637 326 ntBASIC1.35□□□□□ -2.19
HERC6Q8IVU3 AC048334.1-201ENST00000477975 159 ntBASIC1.35□□□□□ -2.19
HERC6Q8IVU3 RNU7-121P-201ENST00000516604 62 ntBASIC1.35□□□□□ -2.19
HERC6Q8IVU3 MIR378D2-201ENST00000580636 98 ntBASIC1.35□□□□□ -2.19
HERC6Q8IVU3 AC104465.1-201ENST00000611365 139 ntBASIC1.35□□□□□ -2.19
HERC6Q8IVU3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.35□□□□□ -2.19
HERC6Q8IVU3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.35□□□□□ -2.19
HERC6Q8IVU3 RNU6-888P-201ENST00000363010 101 ntBASIC1.34□□□□□ -2.19
HERC6Q8IVU3 Y_RNA.370-201ENST00000365589 108 ntBASIC1.34□□□□□ -2.19
HERC6Q8IVU3 SNORD24-201ENST00000383884 75 ntBASIC1.34□□□□□ -2.19
HERC6Q8IVU3 SNORA25-201ENST00000384384 134 ntBASIC1.34□□□□□ -2.19
HERC6Q8IVU3 MIR758-201ENST00000390227 88 ntBASIC1.34□□□□□ -2.19
HERC6Q8IVU3 MIR548O-201ENST00000408583 114 ntBASIC1.34□□□□□ -2.19
HERC6Q8IVU3 RNU6-938P-201ENST00000411285 103 ntBASIC1.34□□□□□ -2.19
HERC6Q8IVU3 RNU4-57P-201ENST00000515980 135 ntBASIC1.34□□□□□ -2.19
HERC6Q8IVU3 RNU6-504P-201ENST00000516568 104 ntBASIC1.34□□□□□ -2.19
HERC6Q8IVU3 RNU6-1270P-201ENST00000517128 108 ntBASIC1.34□□□□□ -2.19
HERC6Q8IVU3 AC068338.1-201ENST00000565567 176 ntBASIC1.34□□□□□ -2.19
HERC6Q8IVU3 AL096861.1-201ENST00000610899 123 ntBASIC1.34□□□□□ -2.19
HERC6Q8IVU3 RNU6-1336P-201ENST00000383886 109 ntBASIC1.33□□□□□ -2.2
HERC6Q8IVU3 RNU6-804P-201ENST00000384286 107 ntBASIC1.33□□□□□ -2.2
HERC6Q8IVU3 RNU6-768P-201ENST00000384683 107 ntBASIC1.33□□□□□ -2.2
HERC6Q8IVU3 RNU6-910P-201ENST00000390844 107 ntBASIC1.33□□□□□ -2.2
HERC6Q8IVU3 RNU6-239P-201ENST00000390990 99 ntBASIC1.33□□□□□ -2.2
HERC6Q8IVU3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.33□□□□□ -2.2
HERC6Q8IVU3 AF228730.3-201ENST00000436691 102 ntBASIC1.33□□□□□ -2.2
HERC6Q8IVU3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.33□□□□□ -2.2
HERC6Q8IVU3 AL022345.2-201ENST00000606307 135 ntBASIC1.33□□□□□ -2.2
HERC6Q8IVU3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.33□□□□□ -2.2
HERC6Q8IVU3 Y_RNA.272-201ENST00000364696 102 ntBASIC1.32□□□□□ -2.2
HERC6Q8IVU3 Y_RNA.357-201ENST00000365487 109 ntBASIC1.32□□□□□ -2.2
HERC6Q8IVU3 Y_RNA.494-201ENST00000384432 111 ntBASIC1.32□□□□□ -2.2
HERC6Q8IVU3 SNORA80D-201ENST00000384488 135 ntBASIC1.32□□□□□ -2.2
HERC6Q8IVU3 MIR618-201ENST00000385287 98 ntBASIC1.32□□□□□ -2.2
HERC6Q8IVU3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
HERC6Q8IVU3 SNORD12-201ENST00000391002 90 ntBASIC1.32□□□□□ -2.2
HERC6Q8IVU3 SNORA79-201ENST00000408376 140 ntBASIC1.32□□□□□ -2.2
HERC6Q8IVU3 RNU7-40P-201ENST00000516397 64 ntBASIC1.32□□□□□ -2.2
HERC6Q8IVU3 MIR548AR-201ENST00000582191 57 ntBASIC1.32□□□□□ -2.2
HERC6Q8IVU3 AC021753.1-201ENST00000635724 168 ntBASIC1.32□□□□□ -2.2
HERC6Q8IVU3 MIR3658-201ENST00000636291 56 ntBASIC1.32□□□□□ -2.2
HERC6Q8IVU3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.32□□□□□ -2.2
HERC6Q8IVU3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
HERC6Q8IVU3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
HERC6Q8IVU3 Y_RNA.36-201ENST00000362602 112 ntBASIC1.31□□□□□ -2.2
HERC6Q8IVU3 RNY1P11-201ENST00000363759 113 ntBASIC1.31□□□□□ -2.2
HERC6Q8IVU3 RNU6-1130P-201ENST00000365434 107 ntBASIC1.31□□□□□ -2.2
HERC6Q8IVU3 RNU6-209P-201ENST00000384118 107 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms