Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC026436.1-201ENST00000510537 270 ntBASIC2.6□□□□□ -1.99
NPAS4Q8IUM7 MIR4778-201ENST00000577635 80 ntBASIC2.6□□□□□ -1.99
NPAS4Q8IUM7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.6□□□□□ -1.99
NPAS4Q8IUM7 SNORA25.6-201ENST00000364121 118 ntBASIC2.59□□□□□ -1.99
NPAS4Q8IUM7 SNORA1.2-201ENST00000365189 134 ntBASIC2.59□□□□□ -1.99
NPAS4Q8IUM7 Y_RNA.494-201ENST00000384432 111 ntBASIC2.59□□□□□ -1.99
NPAS4Q8IUM7 RPS12P2-201ENST00000439728 269 ntBASIC2.59□□□□□ -1.99
NPAS4Q8IUM7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
NPAS4Q8IUM7 RNA5SP233-201ENST00000459153 113 ntBASIC2.59□□□□□ -1.99
NPAS4Q8IUM7 SNORA31.4-201ENST00000516049 129 ntBASIC2.59□□□□□ -1.99
NPAS4Q8IUM7 AC121758.2-201ENST00000553271 193 ntBASIC2.59□□□□□ -1.99
NPAS4Q8IUM7 MIR4299-201ENST00000577899 72 ntBASIC2.59□□□□□ -1.99
NPAS4Q8IUM7 MIR3683-201ENST00000580847 82 ntBASIC2.59□□□□□ -1.99
NPAS4Q8IUM7 SNORD115-40-201ENST00000606510 82 ntBASIC2.59□□□□□ -1.99
NPAS4Q8IUM7 MALAT1.1-201ENST00000618249 95 ntBASIC2.59□□□□□ -1.99
NPAS4Q8IUM7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
NPAS4Q8IUM7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NPAS4Q8IUM7 MIR302B-201ENST00000362188 73 ntBASIC2.58□□□□□ -2
NPAS4Q8IUM7 RNU6-573P-201ENST00000383938 106 ntBASIC2.58□□□□□ -2
NPAS4Q8IUM7 Y_RNA.454-201ENST00000384224 113 ntBASIC2.58□□□□□ -2
NPAS4Q8IUM7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.58□□□□□ -2
NPAS4Q8IUM7 RNU6-816P-201ENST00000390914 107 ntBASIC2.58□□□□□ -2
NPAS4Q8IUM7 RNU6-1268P-201ENST00000391214 107 ntBASIC2.58□□□□□ -2
NPAS4Q8IUM7 RNU6-1239P-201ENST00000391310 107 ntBASIC2.58□□□□□ -2
NPAS4Q8IUM7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.58□□□□□ -2
NPAS4Q8IUM7 SNORA44.1-201ENST00000517031 108 ntBASIC2.58□□□□□ -2
NPAS4Q8IUM7 AC022254.1-201ENST00000567857 235 ntBASIC2.58□□□□□ -2
NPAS4Q8IUM7 MIR5694-201ENST00000581190 76 ntBASIC2.58□□□□□ -2
NPAS4Q8IUM7 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.58□□□□□ -2
NPAS4Q8IUM7 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NPAS4Q8IUM7 AL627390.1-201ENST00000396055 340 ntBASIC2.57□□□□□ -2
NPAS4Q8IUM7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.57□□□□□ -2
NPAS4Q8IUM7 AC093850.1-201ENST00000454121 251 ntBASIC2.57□□□□□ -2
NPAS4Q8IUM7 AC107297.1-201ENST00000459991 176 ntBASIC2.57□□□□□ -2
NPAS4Q8IUM7 RNU6-158P-201ENST00000517104 100 ntBASIC2.57□□□□□ -2
NPAS4Q8IUM7 DEFB122-202ENST00000569013 197 ntBASIC2.57□□□□□ -2
NPAS4Q8IUM7 MIR4769-201ENST00000584126 77 ntBASIC2.57□□□□□ -2
NPAS4Q8IUM7 AL513534.2-201ENST00000603836 250 ntBASIC2.57□□□□□ -2
NPAS4Q8IUM7 MIR2052-201ENST00000636055 55 ntBASIC2.57□□□□□ -2
NPAS4Q8IUM7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
NPAS4Q8IUM7 Y_RNA.107-201ENST00000363190 121 ntBASIC2.56□□□□□ -2
NPAS4Q8IUM7 Y_RNA.241-201ENST00000364470 117 ntBASIC2.56□□□□□ -2
NPAS4Q8IUM7 Y_RNA.342-201ENST00000365352 113 ntBASIC2.56□□□□□ -2
NPAS4Q8IUM7 SNORA27-201ENST00000384323 126 ntBASIC2.56□□□□□ -2
NPAS4Q8IUM7 AC004965.1-201ENST00000413033 213 ntBASIC2.56□□□□□ -2
NPAS4Q8IUM7 AL512326.2-201ENST00000426359 151 ntBASIC2.56□□□□□ -2
NPAS4Q8IUM7 RNU6-322P-201ENST00000516010 103 ntBASIC2.56□□□□□ -2
NPAS4Q8IUM7 DEFB131E-201ENST00000532329 154 ntBASIC2.56□□□□□ -2
NPAS4Q8IUM7 AL627230.6-201ENST00000611129 280 ntBASIC2.56□□□□□ -2
NPAS4Q8IUM7 MIR6840-201ENST00000611937 71 ntBASIC2.56□□□□□ -2
NPAS4Q8IUM7 MIR8074-201ENST00000615081 81 ntBASIC2.56□□□□□ -2
NPAS4Q8IUM7 AC087741.2-201ENST00000619415 172 ntBASIC2.56□□□□□ -2
NPAS4Q8IUM7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
NPAS4Q8IUM7 RNY3P2-201ENST00000362918 102 ntBASIC2.55□□□□□ -2
NPAS4Q8IUM7 Y_RNA.93-201ENST00000363066 109 ntBASIC2.55□□□□□ -2
NPAS4Q8IUM7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.55□□□□□ -2
NPAS4Q8IUM7 MIR516B2-201ENST00000385190 85 ntBASIC2.55□□□□□ -2
NPAS4Q8IUM7 MIR1912-201ENST00000410389 80 ntBASIC2.55□□□□□ -2
NPAS4Q8IUM7 RNU6-592P-201ENST00000411333 103 ntBASIC2.55□□□□□ -2
NPAS4Q8IUM7 AC113410.1-201ENST00000505029 247 ntBASIC2.55□□□□□ -2
NPAS4Q8IUM7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.55□□□□□ -2
NPAS4Q8IUM7 MIR6873-201ENST00000622788 63 ntBASIC2.55□□□□□ -2
NPAS4Q8IUM7 MIR1245B-201ENST00000636115 69 ntBASIC2.55□□□□□ -2
NPAS4Q8IUM7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.54□□□□□ -2
NPAS4Q8IUM7 Y_RNA.531-201ENST00000384589 121 ntBASIC2.54□□□□□ -2
NPAS4Q8IUM7 RNU6-1067P-201ENST00000384752 107 ntBASIC2.54□□□□□ -2
NPAS4Q8IUM7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.54□□□□□ -2
NPAS4Q8IUM7 RNA5SP144-201ENST00000410846 116 ntBASIC2.54□□□□□ -2
NPAS4Q8IUM7 snoU13.23-201ENST00000458863 104 ntBASIC2.54□□□□□ -2
NPAS4Q8IUM7 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.54□□□□□ -2
NPAS4Q8IUM7 RN7SKP12-201ENST00000516275 143 ntBASIC2.54□□□□□ -2
NPAS4Q8IUM7 AC004812.1-201ENST00000540773 146 ntBASIC2.54□□□□□ -2
NPAS4Q8IUM7 MIR5007-201ENST00000583098 95 ntBASIC2.54□□□□□ -2
NPAS4Q8IUM7 Y_RNA.773-201ENST00000607168 90 ntBASIC2.54□□□□□ -2
NPAS4Q8IUM7 AC067747.1-201ENST00000608026 250 ntBASIC2.54□□□□□ -2
NPAS4Q8IUM7 AC095038.3-201ENST00000634439 195 ntBASIC2.54□□□□□ -2
NPAS4Q8IUM7 MIR1255B1-201ENST00000636325 63 ntBASIC2.54□□□□□ -2
NPAS4Q8IUM7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NPAS4Q8IUM7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
NPAS4Q8IUM7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.53□□□□□ -2
NPAS4Q8IUM7 MIR494-201ENST00000349529 81 ntBASIC2.53□□□□□ -2
NPAS4Q8IUM7 SNORD114-1-201ENST00000362705 72 ntBASIC2.53□□□□□ -2
NPAS4Q8IUM7 RNU4-36P-201ENST00000364294 144 ntBASIC2.53□□□□□ -2
NPAS4Q8IUM7 RNU6-203P-201ENST00000384038 104 ntBASIC2.53□□□□□ -2
NPAS4Q8IUM7 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.53□□□□□ -2
NPAS4Q8IUM7 RNU6-998P-201ENST00000515894 101 ntBASIC2.53□□□□□ -2
NPAS4Q8IUM7 SCARNA23-201ENST00000516060 130 ntBASIC2.53□□□□□ -2
NPAS4Q8IUM7 RNU7-181P-201ENST00000517234 74 ntBASIC2.53□□□□□ -2
NPAS4Q8IUM7 IGLV3-17-201ENST00000519099 244 ntBASIC2.53□□□□□ -2
NPAS4Q8IUM7 MIR3618-201ENST00000580330 88 ntBASIC2.53□□□□□ -2
NPAS4Q8IUM7 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NPAS4Q8IUM7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NPAS4Q8IUM7 RNU6-1099P-201ENST00000363533 107 ntBASIC2.52□□□□□ -2.01
NPAS4Q8IUM7 RNU6-1134P-201ENST00000365156 101 ntBASIC2.52□□□□□ -2.01
NPAS4Q8IUM7 RNA5SP259-201ENST00000365541 109 ntBASIC2.52□□□□□ -2.01
NPAS4Q8IUM7 SNORA70.7-201ENST00000384159 133 ntBASIC2.52□□□□□ -2.01
NPAS4Q8IUM7 MIR450A2-201ENST00000385022 100 ntBASIC2.52□□□□□ -2.01
NPAS4Q8IUM7 MIR513A1-201ENST00000385138 129 ntBASIC2.52□□□□□ -2.01
NPAS4Q8IUM7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
NPAS4Q8IUM7 MIR1289-2-201ENST00000408360 111 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms