Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 U7.2-201ENST00000607576 63 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
DDX53Q86TM3 MIR342-201ENST00000362212 99 ntBASIC1.98□□□□□ -2.09
DDX53Q86TM3 RNU6-309P-201ENST00000364573 106 ntBASIC1.98□□□□□ -2.09
DDX53Q86TM3 RNA5SP138-201ENST00000365098 114 ntBASIC1.98□□□□□ -2.09
DDX53Q86TM3 RNA5SP190-201ENST00000365222 118 ntBASIC1.98□□□□□ -2.09
DDX53Q86TM3 Y_RNA.351-201ENST00000365436 96 ntBASIC1.98□□□□□ -2.09
DDX53Q86TM3 RNU6-81P-201ENST00000365608 104 ntBASIC1.98□□□□□ -2.09
DDX53Q86TM3 MIR499A-201ENST00000384903 122 ntBASIC1.98□□□□□ -2.09
DDX53Q86TM3 AL627390.1-201ENST00000396055 340 ntBASIC1.98□□□□□ -2.09
DDX53Q86TM3 AL603914.1-201ENST00000401964 204 ntBASIC1.98□□□□□ -2.09
DDX53Q86TM3 AL451046.2-201ENST00000403074 277 ntBASIC1.98□□□□□ -2.09
DDX53Q86TM3 MTATP6P21-201ENST00000440681 189 ntBASIC1.98□□□□□ -2.09
DDX53Q86TM3 HSPE1P24-201ENST00000450782 238 ntBASIC1.98□□□□□ -2.09
DDX53Q86TM3 RNU6-1211P-201ENST00000459179 105 ntBASIC1.98□□□□□ -2.09
DDX53Q86TM3 SNORA25.15-201ENST00000516487 89 ntBASIC1.98□□□□□ -2.09
DDX53Q86TM3 RNU6-922P-201ENST00000516753 99 ntBASIC1.98□□□□□ -2.09
DDX53Q86TM3 RNU1-40P-201ENST00000516816 164 ntBASIC1.98□□□□□ -2.09
DDX53Q86TM3 RNU1-97P-201ENST00000516872 164 ntBASIC1.98□□□□□ -2.09
DDX53Q86TM3 AC084768.2-201ENST00000622736 221 ntBASIC1.98□□□□□ -2.09
DDX53Q86TM3 Y_RNA.294-201ENST00000364916 102 ntBASIC1.97□□□□□ -2.09
DDX53Q86TM3 MIR570-201ENST00000384917 97 ntBASIC1.97□□□□□ -2.09
DDX53Q86TM3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
DDX53Q86TM3 SNX2P2-201ENST00000424553 323 ntBASIC1.97□□□□□ -2.09
DDX53Q86TM3 AC107297.1-201ENST00000459991 176 ntBASIC1.97□□□□□ -2.09
DDX53Q86TM3 Y_RNA.692-201ENST00000516627 105 ntBASIC1.97□□□□□ -2.09
DDX53Q86TM3 RNU7-70P-201ENST00000516941 66 ntBASIC1.97□□□□□ -2.09
DDX53Q86TM3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.96□□□□□ -2.09
DDX53Q86TM3 RPS29P24-201ENST00000486345 171 ntBASIC1.96□□□□□ -2.1
DDX53Q86TM3 RNU6-250P-201ENST00000516958 103 ntBASIC1.96□□□□□ -2.1
DDX53Q86TM3 MIR4448-201ENST00000584360 86 ntBASIC1.96□□□□□ -2.1
DDX53Q86TM3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.96□□□□□ -2.1
DDX53Q86TM3 AL022345.2-201ENST00000606307 135 ntBASIC1.96□□□□□ -2.1
DDX53Q86TM3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
DDX53Q86TM3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
DDX53Q86TM3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
DDX53Q86TM3 MIR378A-201ENST00000362177 66 ntBASIC1.95□□□□□ -2.1
DDX53Q86TM3 MIR302D-201ENST00000362275 68 ntBASIC1.95□□□□□ -2.1
DDX53Q86TM3 MIR539-201ENST00000365690 78 ntBASIC1.95□□□□□ -2.1
DDX53Q86TM3 SNORD41-201ENST00000386967 70 ntBASIC1.95□□□□□ -2.1
DDX53Q86TM3 AL606753.1-201ENST00000427435 87 ntBASIC1.95□□□□□ -2.1
DDX53Q86TM3 SNORD13-201ENST00000459299 104 ntBASIC1.95□□□□□ -2.1
DDX53Q86TM3 Y_RNA.651-201ENST00000459380 103 ntBASIC1.95□□□□□ -2.1
DDX53Q86TM3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.95□□□□□ -2.1
DDX53Q86TM3 Y_RNA.757-201ENST00000578934 114 ntBASIC1.95□□□□□ -2.1
DDX53Q86TM3 MIR8070-201ENST00000616510 88 ntBASIC1.95□□□□□ -2.1
DDX53Q86TM3 U2.22-201ENST00000636441 106 ntBASIC1.95□□□□□ -2.1
DDX53Q86TM3 AP000648.3-201ENST00000623539 4507 ntBASIC1.95□□□□□ -2.1
DDX53Q86TM3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.94□□□□□ -2.1
DDX53Q86TM3 SNORD1A-201ENST00000364968 72 ntBASIC1.94□□□□□ -2.1
DDX53Q86TM3 RNU6-959P-201ENST00000384671 107 ntBASIC1.94□□□□□ -2.1
DDX53Q86TM3 MIR489-201ENST00000384923 84 ntBASIC1.94□□□□□ -2.1
DDX53Q86TM3 MIR520C-201ENST00000385005 87 ntBASIC1.94□□□□□ -2.1
DDX53Q86TM3 RNU6-321P-201ENST00000410912 106 ntBASIC1.94□□□□□ -2.1
DDX53Q86TM3 RNU7-80P-201ENST00000459562 61 ntBASIC1.94□□□□□ -2.1
DDX53Q86TM3 RPS29P11-201ENST00000496507 171 ntBASIC1.94□□□□□ -2.1
DDX53Q86TM3 AC019176.1-201ENST00000518519 225 ntBASIC1.94□□□□□ -2.1
DDX53Q86TM3 MIR3121-201ENST00000579680 77 ntBASIC1.94□□□□□ -2.1
DDX53Q86TM3 MIR4764-201ENST00000580680 88 ntBASIC1.94□□□□□ -2.1
DDX53Q86TM3 MIR3935-201ENST00000583472 104 ntBASIC1.94□□□□□ -2.1
DDX53Q86TM3 AL513534.2-201ENST00000603836 250 ntBASIC1.94□□□□□ -2.1
DDX53Q86TM3 AC091932.4-201ENST00000623386 200 ntBASIC1.94□□□□□ -2.1
DDX53Q86TM3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.94□□□□□ -2.1
DDX53Q86TM3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.94□□□□□ -2.1
DDX53Q86TM3 AL596211.1-201ENST00000569873 2277 ntBASIC1.94□□□□□ -2.1
DDX53Q86TM3 WWP1P1-201ENST00000466609 2769 ntBASIC1.94□□□□□ -2.1
DDX53Q86TM3 RNU1-133P-201ENST00000364867 167 ntBASIC1.93□□□□□ -2.1
DDX53Q86TM3 MIR518E-201ENST00000385252 88 ntBASIC1.93□□□□□ -2.1
DDX53Q86TM3 RNU7-96P-201ENST00000459535 64 ntBASIC1.93□□□□□ -2.1
DDX53Q86TM3 RNU6-998P-201ENST00000515894 101 ntBASIC1.93□□□□□ -2.1
DDX53Q86TM3 RNU7-43P-201ENST00000516554 64 ntBASIC1.93□□□□□ -2.1
DDX53Q86TM3 MIR4255-201ENST00000579351 72 ntBASIC1.93□□□□□ -2.1
DDX53Q86TM3 MIR4791-201ENST00000607666 84 ntBASIC1.93□□□□□ -2.1
DDX53Q86TM3 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.93□□□□□ -2.1
DDX53Q86TM3 MIR8081-201ENST00000611533 95 ntBASIC1.93□□□□□ -2.1
DDX53Q86TM3 AC243994.1-201ENST00000618627 109 ntBASIC1.93□□□□□ -2.1
DDX53Q86TM3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
DDX53Q86TM3 Y_RNA.454-201ENST00000384224 113 ntBASIC1.92□□□□□ -2.1
DDX53Q86TM3 RNU7-67P-201ENST00000459003 62 ntBASIC1.92□□□□□ -2.1
DDX53Q86TM3 AC079140.2-201ENST00000506193 142 ntBASIC1.92□□□□□ -2.1
DDX53Q86TM3 RNU2-13P-201ENST00000515909 113 ntBASIC1.92□□□□□ -2.1
DDX53Q86TM3 RNU6-958P-201ENST00000516995 106 ntBASIC1.92□□□□□ -2.1
DDX53Q86TM3 MIR3198-2-201ENST00000577868 80 ntBASIC1.92□□□□□ -2.1
DDX53Q86TM3 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.92□□□□□ -2.1
DDX53Q86TM3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.92□□□□□ -2.1
DDX53Q86TM3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
DDX53Q86TM3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
DDX53Q86TM3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
DDX53Q86TM3 Y_RNA.114-201ENST00000363265 113 ntBASIC1.91□□□□□ -2.1
DDX53Q86TM3 RNY1P10-201ENST00000363268 113 ntBASIC1.91□□□□□ -2.1
DDX53Q86TM3 Y_RNA.218-201ENST00000364218 104 ntBASIC1.91□□□□□ -2.1
DDX53Q86TM3 SNORA25.9-201ENST00000365087 128 ntBASIC1.91□□□□□ -2.1
DDX53Q86TM3 SNORD113-1-201ENST00000365321 69 ntBASIC1.91□□□□□ -2.1
DDX53Q86TM3 SNORA70.7-201ENST00000384159 133 ntBASIC1.91□□□□□ -2.1
DDX53Q86TM3 RNU6-1067P-201ENST00000384752 107 ntBASIC1.91□□□□□ -2.1
DDX53Q86TM3 SNORA67.5-201ENST00000391036 107 ntBASIC1.91□□□□□ -2.1
DDX53Q86TM3 AL035398.1-201ENST00000430869 322 ntBASIC1.91□□□□□ -2.1
DDX53Q86TM3 RPS29P29-201ENST00000456396 171 ntBASIC1.91□□□□□ -2.1
DDX53Q86TM3 RNU2-11P-201ENST00000459191 187 ntBASIC1.91□□□□□ -2.1
DDX53Q86TM3 SNORD111.1-201ENST00000516421 86 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 181.5 ms