Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 MIR6817-201ENST00000615588 66 ntBASIC2.37□□□□□ -2.03
UBE3DQ7Z6J8 AC010297.1-201ENST00000623948 149 ntBASIC2.37□□□□□ -2.03
UBE3DQ7Z6J8 AC064859.1-201ENST00000624741 174 ntBASIC2.37□□□□□ -2.03
UBE3DQ7Z6J8 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
UBE3DQ7Z6J8 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
UBE3DQ7Z6J8 RNU6-832P-201ENST00000363319 107 ntBASIC2.36□□□□□ -2.03
UBE3DQ7Z6J8 Y_RNA.171-201ENST00000363760 102 ntBASIC2.36□□□□□ -2.03
UBE3DQ7Z6J8 RNA5SP33-201ENST00000516687 98 ntBASIC2.36□□□□□ -2.03
UBE3DQ7Z6J8 AC103810.6-201ENST00000606708 136 ntBASIC2.36□□□□□ -2.03
UBE3DQ7Z6J8 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.36□□□□□ -2.03
UBE3DQ7Z6J8 MIR1255B1-201ENST00000636325 63 ntBASIC2.36□□□□□ -2.03
UBE3DQ7Z6J8 MIR577-201ENST00000385196 96 ntBASIC2.35□□□□□ -2.03
UBE3DQ7Z6J8 RNY4P29-201ENST00000410801 97 ntBASIC2.35□□□□□ -2.03
UBE3DQ7Z6J8 RPL23AP6-201ENST00000446637 472 ntBASIC2.35□□□□□ -2.03
UBE3DQ7Z6J8 RNU7-45P-201ENST00000459460 63 ntBASIC2.35□□□□□ -2.03
UBE3DQ7Z6J8 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.35□□□□□ -2.03
UBE3DQ7Z6J8 AL049779.4-201ENST00000604500 156 ntBASIC2.35□□□□□ -2.03
UBE3DQ7Z6J8 Y_RNA.773-201ENST00000607168 90 ntBASIC2.35□□□□□ -2.03
UBE3DQ7Z6J8 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
UBE3DQ7Z6J8 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
UBE3DQ7Z6J8 AL365361.1-201ENST00000566942 3481 ntBASIC2.34□□□□□ -2.03
UBE3DQ7Z6J8 RNA5SP393-201ENST00000363423 117 ntBASIC2.34□□□□□ -2.03
UBE3DQ7Z6J8 Y_RNA.342-201ENST00000365352 113 ntBASIC2.34□□□□□ -2.03
UBE3DQ7Z6J8 Y_RNA.354-201ENST00000365448 111 ntBASIC2.34□□□□□ -2.03
UBE3DQ7Z6J8 RNU1-138P-201ENST00000384093 164 ntBASIC2.34□□□□□ -2.03
UBE3DQ7Z6J8 Y_RNA.510-201ENST00000384511 114 ntBASIC2.34□□□□□ -2.03
UBE3DQ7Z6J8 SNORD28B-201ENST00000390993 75 ntBASIC2.34□□□□□ -2.03
UBE3DQ7Z6J8 RNA5SP100-201ENST00000410903 110 ntBASIC2.34□□□□□ -2.03
UBE3DQ7Z6J8 RNA5SP59-201ENST00000410922 110 ntBASIC2.34□□□□□ -2.03
UBE3DQ7Z6J8 RNU6-1258P-201ENST00000516911 111 ntBASIC2.34□□□□□ -2.03
UBE3DQ7Z6J8 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.34□□□□□ -2.03
UBE3DQ7Z6J8 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.34□□□□□ -2.03
UBE3DQ7Z6J8 MIR3162-201ENST00000581818 82 ntBASIC2.34□□□□□ -2.03
UBE3DQ7Z6J8 MIR548AE2-201ENST00000583456 67 ntBASIC2.34□□□□□ -2.03
UBE3DQ7Z6J8 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.34□□□□□ -2.03
UBE3DQ7Z6J8 U4.3-201ENST00000621047 82 ntBASIC2.34□□□□□ -2.03
UBE3DQ7Z6J8 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.34□□□□□ -2.03
UBE3DQ7Z6J8 FO624990.1-201ENST00000636373 85 ntBASIC2.34□□□□□ -2.03
UBE3DQ7Z6J8 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
UBE3DQ7Z6J8 AC005336.3-201ENST00000623833 2679 ntBASIC2.34□□□□□ -2.04
UBE3DQ7Z6J8 SNORD45B-201ENST00000364617 72 ntBASIC2.33□□□□□ -2.04
UBE3DQ7Z6J8 Y_RNA.470-201ENST00000384307 117 ntBASIC2.33□□□□□ -2.04
UBE3DQ7Z6J8 AL023284.1-201ENST00000403956 276 ntBASIC2.33□□□□□ -2.04
UBE3DQ7Z6J8 RNA5SP450-201ENST00000411206 102 ntBASIC2.33□□□□□ -2.04
UBE3DQ7Z6J8 AC004941.2-201ENST00000427009 228 ntBASIC2.33□□□□□ -2.04
UBE3DQ7Z6J8 SNORA31.25-201ENST00000517242 134 ntBASIC2.33□□□□□ -2.04
UBE3DQ7Z6J8 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
UBE3DQ7Z6J8 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
UBE3DQ7Z6J8 DEFA7P-201ENST00000382676 285 ntBASIC2.32□□□□□ -2.04
UBE3DQ7Z6J8 SNORA18-201ENST00000384416 132 ntBASIC2.32□□□□□ -2.04
UBE3DQ7Z6J8 RNU6-913P-201ENST00000390913 95 ntBASIC2.32□□□□□ -2.04
UBE3DQ7Z6J8 AL359511.1-201ENST00000402970 211 ntBASIC2.32□□□□□ -2.04
UBE3DQ7Z6J8 RPS12P2-201ENST00000439728 269 ntBASIC2.32□□□□□ -2.04
UBE3DQ7Z6J8 FAM106DP-201ENST00000586416 501 ntBASIC2.32□□□□□ -2.04
UBE3DQ7Z6J8 SNORD14A-201ENST00000606526 91 ntBASIC2.32□□□□□ -2.04
UBE3DQ7Z6J8 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
UBE3DQ7Z6J8 MIR21-201ENST00000362134 72 ntBASIC2.31□□□□□ -2.04
UBE3DQ7Z6J8 SNORA1.1-201ENST00000364671 133 ntBASIC2.31□□□□□ -2.04
UBE3DQ7Z6J8 RNU6-820P-201ENST00000384273 107 ntBASIC2.31□□□□□ -2.04
UBE3DQ7Z6J8 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.31□□□□□ -2.04
UBE3DQ7Z6J8 AL513534.2-201ENST00000603836 250 ntBASIC2.31□□□□□ -2.04
UBE3DQ7Z6J8 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
UBE3DQ7Z6J8 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.31□□□□□ -2.04
UBE3DQ7Z6J8 AC016717.2-201ENST00000609089 5141 ntBASIC2.31□□□□□ -2.04
UBE3DQ7Z6J8 MIR6073-201ENST00000352083 89 ntBASIC2.3□□□□□ -2.04
UBE3DQ7Z6J8 RNU1-52P-201ENST00000384190 164 ntBASIC2.3□□□□□ -2.04
UBE3DQ7Z6J8 RNU6-1201P-201ENST00000384227 107 ntBASIC2.3□□□□□ -2.04
UBE3DQ7Z6J8 RNU6-616P-201ENST00000384353 107 ntBASIC2.3□□□□□ -2.04
UBE3DQ7Z6J8 MIR450A2-201ENST00000385022 100 ntBASIC2.3□□□□□ -2.04
UBE3DQ7Z6J8 RNU6-679P-201ENST00000391003 106 ntBASIC2.3□□□□□ -2.04
UBE3DQ7Z6J8 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.3□□□□□ -2.04
UBE3DQ7Z6J8 RNU6-762P-201ENST00000517107 102 ntBASIC2.3□□□□□ -2.04
UBE3DQ7Z6J8 MIR4446-201ENST00000578505 67 ntBASIC2.3□□□□□ -2.04
UBE3DQ7Z6J8 MIR4672-201ENST00000583126 81 ntBASIC2.3□□□□□ -2.04
UBE3DQ7Z6J8 MIR4439-201ENST00000583746 80 ntBASIC2.3□□□□□ -2.04
UBE3DQ7Z6J8 AC096720.1-201ENST00000604441 183 ntBASIC2.3□□□□□ -2.04
UBE3DQ7Z6J8 MIR8055-201ENST00000610739 97 ntBASIC2.3□□□□□ -2.04
UBE3DQ7Z6J8 Z97988.1-201ENST00000637697 135 ntBASIC2.3□□□□□ -2.04
UBE3DQ7Z6J8 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
UBE3DQ7Z6J8 RNU6-1313P-201ENST00000362622 102 ntBASIC2.29□□□□□ -2.04
UBE3DQ7Z6J8 RNU6-170P-201ENST00000362832 104 ntBASIC2.29□□□□□ -2.04
UBE3DQ7Z6J8 MIR605-201ENST00000385078 83 ntBASIC2.29□□□□□ -2.04
UBE3DQ7Z6J8 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.29□□□□□ -2.04
UBE3DQ7Z6J8 AC011753.1-201ENST00000451001 220 ntBASIC2.29□□□□□ -2.04
UBE3DQ7Z6J8 AC067747.1-201ENST00000608026 250 ntBASIC2.29□□□□□ -2.04
UBE3DQ7Z6J8 AC008133.2-201ENST00000624540 351 ntBASIC2.29□□□□□ -2.04
UBE3DQ7Z6J8 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
UBE3DQ7Z6J8 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
UBE3DQ7Z6J8 RNU6-457P-201ENST00000363999 107 ntBASIC2.28□□□□□ -2.04
UBE3DQ7Z6J8 SNORA67.4-201ENST00000384688 142 ntBASIC2.28□□□□□ -2.04
UBE3DQ7Z6J8 RNY1P7-201ENST00000384743 110 ntBASIC2.28□□□□□ -2.04
UBE3DQ7Z6J8 SNORA7.5-201ENST00000410672 110 ntBASIC2.28□□□□□ -2.04
UBE3DQ7Z6J8 RNU6-1190P-201ENST00000410811 104 ntBASIC2.28□□□□□ -2.04
UBE3DQ7Z6J8 AL353813.1-201ENST00000440700 253 ntBASIC2.28□□□□□ -2.04
UBE3DQ7Z6J8 AC026436.1-201ENST00000510537 270 ntBASIC2.28□□□□□ -2.04
UBE3DQ7Z6J8 RNU6-322P-201ENST00000516010 103 ntBASIC2.28□□□□□ -2.04
UBE3DQ7Z6J8 SNORA31.17-201ENST00000516953 127 ntBASIC2.28□□□□□ -2.04
UBE3DQ7Z6J8 AC026421.1-201ENST00000519101 163 ntBASIC2.28□□□□□ -2.04
UBE3DQ7Z6J8 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.28□□□□□ -2.04
UBE3DQ7Z6J8 MIR5194-201ENST00000582634 120 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 243.6 ms