Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 RNU7-25P-201ENST00000516544 62 ntBASIC1.63□□□□□ -2.15
KRT28Q7Z3Y7 SNORD61-201ENST00000384252 73 ntBASIC1.62□□□□□ -2.15
KRT28Q7Z3Y7 Y_RNA.547-201ENST00000384654 119 ntBASIC1.62□□□□□ -2.15
KRT28Q7Z3Y7 MIR518F-201ENST00000384973 87 ntBASIC1.62□□□□□ -2.15
KRT28Q7Z3Y7 AC006461.1-201ENST00000412637 326 ntBASIC1.62□□□□□ -2.15
KRT28Q7Z3Y7 HMGN1P33-201ENST00000432945 451 ntBASIC1.62□□□□□ -2.15
KRT28Q7Z3Y7 RNU6-947P-201ENST00000516264 106 ntBASIC1.62□□□□□ -2.15
KRT28Q7Z3Y7 RNU7-121P-201ENST00000516604 62 ntBASIC1.62□□□□□ -2.15
KRT28Q7Z3Y7 AC068338.1-201ENST00000565567 176 ntBASIC1.62□□□□□ -2.15
KRT28Q7Z3Y7 MIR4295-201ENST00000585286 85 ntBASIC1.62□□□□□ -2.15
KRT28Q7Z3Y7 AL121890.5-201ENST00000620848 304 ntBASIC1.62□□□□□ -2.15
KRT28Q7Z3Y7 Y_RNA.180-201ENST00000363867 113 ntBASIC1.61□□□□□ -2.15
KRT28Q7Z3Y7 RNU4-84P-201ENST00000364200 139 ntBASIC1.61□□□□□ -2.15
KRT28Q7Z3Y7 Y_RNA.357-201ENST00000365487 109 ntBASIC1.61□□□□□ -2.15
KRT28Q7Z3Y7 SNORD41-201ENST00000386967 70 ntBASIC1.61□□□□□ -2.15
KRT28Q7Z3Y7 U8.17-201ENST00000391292 132 ntBASIC1.61□□□□□ -2.15
KRT28Q7Z3Y7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.61□□□□□ -2.15
KRT28Q7Z3Y7 RNU6-1135P-201ENST00000411083 103 ntBASIC1.61□□□□□ -2.15
KRT28Q7Z3Y7 AC087343.1-201ENST00000477341 475 ntBASIC1.61□□□□□ -2.15
KRT28Q7Z3Y7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.61□□□□□ -2.15
KRT28Q7Z3Y7 Y_RNA.662-201ENST00000516028 97 ntBASIC1.61□□□□□ -2.15
KRT28Q7Z3Y7 RNU6-113P-201ENST00000516653 101 ntBASIC1.61□□□□□ -2.15
KRT28Q7Z3Y7 AL357312.1-201ENST00000603879 298 ntBASIC1.61□□□□□ -2.15
KRT28Q7Z3Y7 GHRLOS.1-201ENST00000610995 70 ntBASIC1.61□□□□□ -2.15
KRT28Q7Z3Y7 MIR216A-201ENST00000385063 110 ntBASIC1.6□□□□□ -2.15
KRT28Q7Z3Y7 SNORD123-201ENST00000459473 70 ntBASIC1.6□□□□□ -2.15
KRT28Q7Z3Y7 RPL30P7-201ENST00000479312 323 ntBASIC1.6□□□□□ -2.15
KRT28Q7Z3Y7 AC074198.2-201ENST00000508153 258 ntBASIC1.6□□□□□ -2.15
KRT28Q7Z3Y7 SNORA74.3-201ENST00000517108 154 ntBASIC1.6□□□□□ -2.15
KRT28Q7Z3Y7 MIR378D2-201ENST00000580636 98 ntBASIC1.6□□□□□ -2.15
KRT28Q7Z3Y7 AL365205.2-201ENST00000594586 68 ntBASIC1.6□□□□□ -2.15
KRT28Q7Z3Y7 AP001485.1-201ENST00000604799 199 ntBASIC1.6□□□□□ -2.15
KRT28Q7Z3Y7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRT28Q7Z3Y7 SNORD115-28-201ENST00000363931 81 ntBASIC1.59□□□□□ -2.15
KRT28Q7Z3Y7 Y_RNA.521-201ENST00000384560 114 ntBASIC1.59□□□□□ -2.15
KRT28Q7Z3Y7 MIR520C-201ENST00000385005 87 ntBASIC1.59□□□□□ -2.15
KRT28Q7Z3Y7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
KRT28Q7Z3Y7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.59□□□□□ -2.15
KRT28Q7Z3Y7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.59□□□□□ -2.15
KRT28Q7Z3Y7 SEPT7P4-201ENST00000437076 306 ntBASIC1.59□□□□□ -2.15
KRT28Q7Z3Y7 SNORD116-25-201ENST00000516517 92 ntBASIC1.59□□□□□ -2.15
KRT28Q7Z3Y7 RNU6-902P-201ENST00000517212 91 ntBASIC1.59□□□□□ -2.15
KRT28Q7Z3Y7 RNU7-181P-201ENST00000517234 74 ntBASIC1.59□□□□□ -2.15
KRT28Q7Z3Y7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
KRT28Q7Z3Y7 Y_RNA.270-201ENST00000364693 104 ntBASIC1.58□□□□□ -2.16
KRT28Q7Z3Y7 SNORA1.2-201ENST00000365189 134 ntBASIC1.58□□□□□ -2.16
KRT28Q7Z3Y7 RNU6-597P-201ENST00000365620 102 ntBASIC1.58□□□□□ -2.16
KRT28Q7Z3Y7 RNU6-1067P-201ENST00000384752 107 ntBASIC1.58□□□□□ -2.16
KRT28Q7Z3Y7 MT-TR-201ENST00000387439 65 ntBASIC1.58□□□□□ -2.16
KRT28Q7Z3Y7 RNU6-394P-201ENST00000410735 107 ntBASIC1.58□□□□□ -2.16
KRT28Q7Z3Y7 RNU6-938P-201ENST00000411285 103 ntBASIC1.58□□□□□ -2.16
KRT28Q7Z3Y7 RPS27P16-201ENST00000425758 201 ntBASIC1.58□□□□□ -2.16
KRT28Q7Z3Y7 RPL39P39-201ENST00000455840 151 ntBASIC1.58□□□□□ -2.16
KRT28Q7Z3Y7 RNU6-1212P-201ENST00000517023 104 ntBASIC1.58□□□□□ -2.16
KRT28Q7Z3Y7 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.58□□□□□ -2.16
KRT28Q7Z3Y7 MIR3664-201ENST00000579074 99 ntBASIC1.58□□□□□ -2.16
KRT28Q7Z3Y7 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
KRT28Q7Z3Y7 Y_RNA.68-201ENST00000362881 102 ntBASIC1.57□□□□□ -2.16
KRT28Q7Z3Y7 Y_RNA.150-201ENST00000363562 102 ntBASIC1.57□□□□□ -2.16
KRT28Q7Z3Y7 RNU6-239P-201ENST00000390990 99 ntBASIC1.57□□□□□ -2.16
KRT28Q7Z3Y7 AC107297.1-201ENST00000459991 176 ntBASIC1.57□□□□□ -2.16
KRT28Q7Z3Y7 RPS23P4-201ENST00000487908 423 ntBASIC1.57□□□□□ -2.16
KRT28Q7Z3Y7 AC107027.2-201ENST00000512197 115 ntBASIC1.57□□□□□ -2.16
KRT28Q7Z3Y7 SNORD111.1-201ENST00000516421 86 ntBASIC1.57□□□□□ -2.16
KRT28Q7Z3Y7 AL512310.8-201ENST00000550183 120 ntBASIC1.57□□□□□ -2.16
KRT28Q7Z3Y7 AC134878.1-201ENST00000619901 243 ntBASIC1.57□□□□□ -2.16
KRT28Q7Z3Y7 AL161722.3-201ENST00000605789 2983 ntBASIC1.56□□□□□ -2.16
KRT28Q7Z3Y7 Y_RNA.370-201ENST00000365589 108 ntBASIC1.56□□□□□ -2.16
KRT28Q7Z3Y7 Y_RNA.464-201ENST00000384282 110 ntBASIC1.56□□□□□ -2.16
KRT28Q7Z3Y7 Y_RNA.542-201ENST00000384641 111 ntBASIC1.56□□□□□ -2.16
KRT28Q7Z3Y7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.56□□□□□ -2.16
KRT28Q7Z3Y7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
KRT28Q7Z3Y7 Y_RNA.580-201ENST00000391004 95 ntBASIC1.56□□□□□ -2.16
KRT28Q7Z3Y7 AC087499.4-201ENST00000448505 178 ntBASIC1.56□□□□□ -2.16
KRT28Q7Z3Y7 RNU2-13P-201ENST00000515909 113 ntBASIC1.56□□□□□ -2.16
KRT28Q7Z3Y7 RNU7-43P-201ENST00000516554 64 ntBASIC1.56□□□□□ -2.16
KRT28Q7Z3Y7 RN7SKP88-201ENST00000516847 250 ntBASIC1.56□□□□□ -2.16
KRT28Q7Z3Y7 MIR548AR-201ENST00000582191 57 ntBASIC1.56□□□□□ -2.16
KRT28Q7Z3Y7 7SK.8-201ENST00000612110 250 ntBASIC1.56□□□□□ -2.16
KRT28Q7Z3Y7 7SK.11-201ENST00000615477 250 ntBASIC1.56□□□□□ -2.16
KRT28Q7Z3Y7 7SK.13-201ENST00000622040 250 ntBASIC1.56□□□□□ -2.16
KRT28Q7Z3Y7 MIR373-201ENST00000362273 69 ntBASIC1.55□□□□□ -2.16
KRT28Q7Z3Y7 Y_RNA.37-201ENST00000362606 108 ntBASIC1.55□□□□□ -2.16
KRT28Q7Z3Y7 Y_RNA.241-201ENST00000364470 117 ntBASIC1.55□□□□□ -2.16
KRT28Q7Z3Y7 RNU6-1292P-201ENST00000383856 107 ntBASIC1.55□□□□□ -2.16
KRT28Q7Z3Y7 SNORA1-201ENST00000384107 130 ntBASIC1.55□□□□□ -2.16
KRT28Q7Z3Y7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.55□□□□□ -2.16
KRT28Q7Z3Y7 MIR4764-201ENST00000580680 88 ntBASIC1.55□□□□□ -2.16
KRT28Q7Z3Y7 MIR3129-201ENST00000581095 76 ntBASIC1.55□□□□□ -2.16
KRT28Q7Z3Y7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
KRT28Q7Z3Y7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.55□□□□□ -2.16
KRT28Q7Z3Y7 Y_RNA.251-201ENST00000364551 99 ntBASIC1.54□□□□□ -2.16
KRT28Q7Z3Y7 Y_RNA.272-201ENST00000364696 102 ntBASIC1.54□□□□□ -2.16
KRT28Q7Z3Y7 Y_RNA.337-201ENST00000365312 102 ntBASIC1.54□□□□□ -2.16
KRT28Q7Z3Y7 SNORD28B-201ENST00000390993 75 ntBASIC1.54□□□□□ -2.16
KRT28Q7Z3Y7 RNU6-955P-201ENST00000410497 104 ntBASIC1.54□□□□□ -2.16
KRT28Q7Z3Y7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.54□□□□□ -2.16
KRT28Q7Z3Y7 AF228730.3-201ENST00000436691 102 ntBASIC1.54□□□□□ -2.16
KRT28Q7Z3Y7 AP003484.1-201ENST00000530974 250 ntBASIC1.54□□□□□ -2.16
KRT28Q7Z3Y7 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms