Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.91□□□□□ -2.26
NUP54Q7Z3B4 AP003484.1-201ENST00000530974 250 ntBASIC0.91□□□□□ -2.26
NUP54Q7Z3B4 AP000942.4-201ENST00000604811 241 ntBASIC0.91□□□□□ -2.26
NUP54Q7Z3B4 AL353621.2-201ENST00000605340 133 ntBASIC0.91□□□□□ -2.26
NUP54Q7Z3B4 AC062037.2-201ENST00000610137 73 ntBASIC0.91□□□□□ -2.26
NUP54Q7Z3B4 AC106800.4-201ENST00000614905 153 ntBASIC0.91□□□□□ -2.26
NUP54Q7Z3B4 Y_RNA.199-201ENST00000364014 102 ntBASIC0.9□□□□□ -2.27
NUP54Q7Z3B4 RNY4P28-201ENST00000365281 93 ntBASIC0.9□□□□□ -2.27
NUP54Q7Z3B4 RNU6-728P-201ENST00000365375 104 ntBASIC0.9□□□□□ -2.27
NUP54Q7Z3B4 Y_RNA.494-201ENST00000384432 111 ntBASIC0.9□□□□□ -2.27
NUP54Q7Z3B4 SNORD111-201ENST00000408139 94 ntBASIC0.9□□□□□ -2.27
NUP54Q7Z3B4 RNA5SP102-201ENST00000516865 106 ntBASIC0.9□□□□□ -2.27
NUP54Q7Z3B4 AC036111.3-201ENST00000526389 112 ntBASIC0.9□□□□□ -2.27
NUP54Q7Z3B4 AC023827.1-201ENST00000569247 97 ntBASIC0.9□□□□□ -2.27
NUP54Q7Z3B4 MIR4653-201ENST00000585107 83 ntBASIC0.9□□□□□ -2.27
NUP54Q7Z3B4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
NUP54Q7Z3B4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.89□□□□□ -2.27
NUP54Q7Z3B4 SNORD27-201ENST00000363981 72 ntBASIC0.89□□□□□ -2.27
NUP54Q7Z3B4 Y_RNA.410-201ENST00000383992 113 ntBASIC0.89□□□□□ -2.27
NUP54Q7Z3B4 SNORA27-201ENST00000384323 126 ntBASIC0.89□□□□□ -2.27
NUP54Q7Z3B4 MT-TN-201ENST00000387400 73 ntBASIC0.89□□□□□ -2.27
NUP54Q7Z3B4 RNU7-67P-201ENST00000459003 62 ntBASIC0.89□□□□□ -2.27
NUP54Q7Z3B4 ACA64.5-201ENST00000516207 127 ntBASIC0.89□□□□□ -2.27
NUP54Q7Z3B4 SNORA18.4-201ENST00000516440 124 ntBASIC0.89□□□□□ -2.27
NUP54Q7Z3B4 RNU6-197P-201ENST00000516680 100 ntBASIC0.89□□□□□ -2.27
NUP54Q7Z3B4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.88□□□□□ -2.27
NUP54Q7Z3B4 RNU6-654P-201ENST00000364373 107 ntBASIC0.88□□□□□ -2.27
NUP54Q7Z3B4 SNORD113.3-201ENST00000364630 78 ntBASIC0.88□□□□□ -2.27
NUP54Q7Z3B4 RNU6-702P-201ENST00000364982 107 ntBASIC0.88□□□□□ -2.27
NUP54Q7Z3B4 RNU6-196P-201ENST00000384315 107 ntBASIC0.88□□□□□ -2.27
NUP54Q7Z3B4 MIR608-201ENST00000384820 100 ntBASIC0.88□□□□□ -2.27
NUP54Q7Z3B4 SNORA79-201ENST00000408376 140 ntBASIC0.88□□□□□ -2.27
NUP54Q7Z3B4 RNU4-43P-201ENST00000410628 137 ntBASIC0.88□□□□□ -2.27
NUP54Q7Z3B4 RPS3AP1-201ENST00000413190 320 ntBASIC0.88□□□□□ -2.27
NUP54Q7Z3B4 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.88□□□□□ -2.27
NUP54Q7Z3B4 AF228730.3-201ENST00000436691 102 ntBASIC0.88□□□□□ -2.27
NUP54Q7Z3B4 MTND1P19-201ENST00000511780 315 ntBASIC0.88□□□□□ -2.27
NUP54Q7Z3B4 SNORD36C-201ENST00000516733 66 ntBASIC0.88□□□□□ -2.27
NUP54Q7Z3B4 MIR377-201ENST00000362145 69 ntBASIC0.87□□□□□ -2.27
NUP54Q7Z3B4 Y_RNA.269-201ENST00000364685 89 ntBASIC0.87□□□□□ -2.27
NUP54Q7Z3B4 Y_RNA.477-201ENST00000384352 108 ntBASIC0.87□□□□□ -2.27
NUP54Q7Z3B4 Y_RNA.539-201ENST00000384635 107 ntBASIC0.87□□□□□ -2.27
NUP54Q7Z3B4 MIR1276-201ENST00000408707 83 ntBASIC0.87□□□□□ -2.27
NUP54Q7Z3B4 RNU7-73P-201ENST00000458743 63 ntBASIC0.87□□□□□ -2.27
NUP54Q7Z3B4 RPS29P24-201ENST00000486345 171 ntBASIC0.87□□□□□ -2.27
NUP54Q7Z3B4 PSMC1P5-201ENST00000512850 177 ntBASIC0.87□□□□□ -2.27
NUP54Q7Z3B4 Y_RNA.673-201ENST00000516306 88 ntBASIC0.87□□□□□ -2.27
NUP54Q7Z3B4 RNU6-113P-201ENST00000516653 101 ntBASIC0.87□□□□□ -2.27
NUP54Q7Z3B4 RNU7-53P-201ENST00000516705 60 ntBASIC0.87□□□□□ -2.27
NUP54Q7Z3B4 MIR4744-201ENST00000581563 82 ntBASIC0.87□□□□□ -2.27
NUP54Q7Z3B4 MIR4503-201ENST00000582187 83 ntBASIC0.87□□□□□ -2.27
NUP54Q7Z3B4 MIR6857-201ENST00000613267 93 ntBASIC0.87□□□□□ -2.27
NUP54Q7Z3B4 MIR8070-201ENST00000616510 88 ntBASIC0.87□□□□□ -2.27
NUP54Q7Z3B4 Y_RNA.65-201ENST00000362846 100 ntBASIC0.86□□□□□ -2.27
NUP54Q7Z3B4 Y_RNA.168-201ENST00000363740 102 ntBASIC0.86□□□□□ -2.27
NUP54Q7Z3B4 Y_RNA.193-201ENST00000363979 102 ntBASIC0.86□□□□□ -2.27
NUP54Q7Z3B4 Y_RNA.452-201ENST00000384202 108 ntBASIC0.86□□□□□ -2.27
NUP54Q7Z3B4 MIR532-201ENST00000385025 91 ntBASIC0.86□□□□□ -2.27
NUP54Q7Z3B4 RNU7-96P-201ENST00000459535 64 ntBASIC0.86□□□□□ -2.27
NUP54Q7Z3B4 RNU6-1023P-201ENST00000516137 106 ntBASIC0.86□□□□□ -2.27
NUP54Q7Z3B4 RNU6-561P-201ENST00000516222 102 ntBASIC0.86□□□□□ -2.27
NUP54Q7Z3B4 RNU4-71P-201ENST00000516258 113 ntBASIC0.86□□□□□ -2.27
NUP54Q7Z3B4 RNA5SP255-201ENST00000516370 107 ntBASIC0.86□□□□□ -2.27
NUP54Q7Z3B4 RNU6-958P-201ENST00000516995 106 ntBASIC0.86□□□□□ -2.27
NUP54Q7Z3B4 MIR3128-201ENST00000581957 66 ntBASIC0.86□□□□□ -2.27
NUP54Q7Z3B4 Y_RNA.23-201ENST00000362496 106 ntBASIC0.85□□□□□ -2.27
NUP54Q7Z3B4 Y_RNA.308-201ENST00000365043 101 ntBASIC0.85□□□□□ -2.27
NUP54Q7Z3B4 RNU6-1189P-201ENST00000383958 107 ntBASIC0.85□□□□□ -2.27
NUP54Q7Z3B4 SNORA2B-201ENST00000384583 137 ntBASIC0.85□□□□□ -2.27
NUP54Q7Z3B4 Y_RNA.542-201ENST00000384641 111 ntBASIC0.85□□□□□ -2.27
NUP54Q7Z3B4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.85□□□□□ -2.27
NUP54Q7Z3B4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.85□□□□□ -2.27
NUP54Q7Z3B4 AP000753.3-201ENST00000604083 169 ntBASIC0.85□□□□□ -2.27
NUP54Q7Z3B4 MIR6504-201ENST00000613520 61 ntBASIC0.85□□□□□ -2.27
NUP54Q7Z3B4 MIR96-201ENST00000362288 78 ntBASIC0.84□□□□□ -2.27
NUP54Q7Z3B4 Y_RNA.7-201ENST00000362352 102 ntBASIC0.84□□□□□ -2.27
NUP54Q7Z3B4 Y_RNA.121-201ENST00000363309 113 ntBASIC0.84□□□□□ -2.27
NUP54Q7Z3B4 SNORD114-27-201ENST00000363766 70 ntBASIC0.84□□□□□ -2.27
NUP54Q7Z3B4 RNU6-580P-201ENST00000365159 107 ntBASIC0.84□□□□□ -2.27
NUP54Q7Z3B4 Y_RNA.440-201ENST00000384120 114 ntBASIC0.84□□□□□ -2.27
NUP54Q7Z3B4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
NUP54Q7Z3B4 Y_RNA.626-201ENST00000411288 95 ntBASIC0.84□□□□□ -2.27
NUP54Q7Z3B4 AL035398.1-201ENST00000430869 322 ntBASIC0.84□□□□□ -2.27
NUP54Q7Z3B4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.84□□□□□ -2.27
NUP54Q7Z3B4 AC067940.1-201ENST00000458411 300 ntBASIC0.84□□□□□ -2.27
NUP54Q7Z3B4 U7.7-201ENST00000459276 60 ntBASIC0.84□□□□□ -2.27
NUP54Q7Z3B4 RNY3P16-201ENST00000516338 101 ntBASIC0.84□□□□□ -2.27
NUP54Q7Z3B4 MIR4264-201ENST00000583520 66 ntBASIC0.84□□□□□ -2.27
NUP54Q7Z3B4 MIR3149-201ENST00000584629 83 ntBASIC0.84□□□□□ -2.27
NUP54Q7Z3B4 RNU6-94P-201ENST00000607728 107 ntBASIC0.84□□□□□ -2.27
NUP54Q7Z3B4 7SK.10-201ENST00000621414 298 ntBASIC0.84□□□□□ -2.27
NUP54Q7Z3B4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
NUP54Q7Z3B4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
NUP54Q7Z3B4 HSBP1P2-201ENST00000299671 229 ntBASIC0.83□□□□□ -2.28
NUP54Q7Z3B4 Y_RNA.238-201ENST00000364441 102 ntBASIC0.83□□□□□ -2.28
NUP54Q7Z3B4 SNORA25.9-201ENST00000365087 128 ntBASIC0.83□□□□□ -2.28
NUP54Q7Z3B4 SNORA1-201ENST00000384107 130 ntBASIC0.83□□□□□ -2.28
NUP54Q7Z3B4 Y_RNA.447-201ENST00000384184 113 ntBASIC0.83□□□□□ -2.28
NUP54Q7Z3B4 RNU6-463P-201ENST00000384340 107 ntBASIC0.83□□□□□ -2.28
NUP54Q7Z3B4 RNU6-125P-201ENST00000384505 107 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms