Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 RNY3P10-201ENST00000384764 102 ntBASIC-1.37□□□□□ -2.63
CCDC171Q6TFL3 RNA5SP261-201ENST00000410536 106 ntBASIC-1.37□□□□□ -2.63
CCDC171Q6TFL3 MTND2P39-201ENST00000457230 764 ntBASIC-1.37□□□□□ -2.63
CCDC171Q6TFL3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.37□□□□□ -2.63
CCDC171Q6TFL3 MIR378F-201ENST00000578143 78 ntBASIC-1.37□□□□□ -2.63
CCDC171Q6TFL3 MIR4499-201ENST00000584834 69 ntBASIC-1.37□□□□□ -2.63
CCDC171Q6TFL3 RNU6-89P-201ENST00000606519 100 ntBASIC-1.37□□□□□ -2.63
CCDC171Q6TFL3 RNY1P13-201ENST00000365030 105 ntBASIC-1.38□□□□□ -2.63
CCDC171Q6TFL3 RNU6-24P-201ENST00000384440 107 ntBASIC-1.38□□□□□ -2.63
CCDC171Q6TFL3 RNU6-721P-201ENST00000410155 105 ntBASIC-1.38□□□□□ -2.63
CCDC171Q6TFL3 SNORA36B-201ENST00000410438 131 ntBASIC-1.38□□□□□ -2.63
CCDC171Q6TFL3 AF228730.4-201ENST00000421457 183 ntBASIC-1.38□□□□□ -2.63
CCDC171Q6TFL3 RNU6-311P-201ENST00000516224 102 ntBASIC-1.38□□□□□ -2.63
CCDC171Q6TFL3 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.38□□□□□ -2.63
CCDC171Q6TFL3 MIR3672-201ENST00000584290 82 ntBASIC-1.38□□□□□ -2.63
CCDC171Q6TFL3 MIR6851-201ENST00000617060 67 ntBASIC-1.38□□□□□ -2.63
CCDC171Q6TFL3 AC097520.1-201ENST00000624435 385 ntBASIC-1.38□□□□□ -2.63
CCDC171Q6TFL3 RNU6-1059P-201ENST00000363752 98 ntBASIC-1.39□□□□□ -2.63
CCDC171Q6TFL3 RNU1-141P-201ENST00000364623 158 ntBASIC-1.39□□□□□ -2.63
CCDC171Q6TFL3 AL590004.1-201ENST00000405321 300 ntBASIC-1.39□□□□□ -2.63
CCDC171Q6TFL3 SNORA13-201ENST00000458790 133 ntBASIC-1.39□□□□□ -2.63
CCDC171Q6TFL3 RNU6-693P-201ENST00000516134 107 ntBASIC-1.39□□□□□ -2.63
CCDC171Q6TFL3 RNU7-149P-201ENST00000516739 59 ntBASIC-1.39□□□□□ -2.63
CCDC171Q6TFL3 AC022441.3-201ENST00000605737 136 ntBASIC-1.39□□□□□ -2.63
CCDC171Q6TFL3 MIR302B-201ENST00000362188 73 ntBASIC-1.4□□□□□ -2.63
CCDC171Q6TFL3 RNU6-626P-201ENST00000363354 107 ntBASIC-1.4□□□□□ -2.63
CCDC171Q6TFL3 RNA5SP133-201ENST00000363368 119 ntBASIC-1.4□□□□□ -2.63
CCDC171Q6TFL3 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.4□□□□□ -2.63
CCDC171Q6TFL3 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.4□□□□□ -2.63
CCDC171Q6TFL3 AC074085.1-201ENST00000413598 418 ntBASIC-1.4□□□□□ -2.63
CCDC171Q6TFL3 RNU6-274P-201ENST00000459566 107 ntBASIC-1.4□□□□□ -2.63
CCDC171Q6TFL3 RN7SKP19-201ENST00000516016 252 ntBASIC-1.4□□□□□ -2.63
CCDC171Q6TFL3 AC024933.1-201ENST00000608472 348 ntBASIC-1.4□□□□□ -2.63
CCDC171Q6TFL3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.4□□□□□ -2.63
CCDC171Q6TFL3 MIR539-201ENST00000365690 78 ntBASIC-1.4□□□□□ -2.63
CCDC171Q6TFL3 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.4□□□□□ -2.63
CCDC171Q6TFL3 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.4□□□□□ -2.63
CCDC171Q6TFL3 RNU6-842P-201ENST00000384269 107 ntBASIC-1.4□□□□□ -2.63
CCDC171Q6TFL3 AC023449.1-201ENST00000454464 154 ntBASIC-1.4□□□□□ -2.63
CCDC171Q6TFL3 RNU6-256P-201ENST00000516747 97 ntBASIC-1.4□□□□□ -2.63
CCDC171Q6TFL3 AC087752.4-201ENST00000605911 462 ntBASIC-1.4□□□□□ -2.63
CCDC171Q6TFL3 MTND5P18-201ENST00000445624 1801 ntBASIC-1.41□□□□□ -2.63
CCDC171Q6TFL3 Y_RNA.72-201ENST00000362894 103 ntBASIC-1.41□□□□□ -2.64
CCDC171Q6TFL3 Y_RNA.135-201ENST00000363439 95 ntBASIC-1.41□□□□□ -2.64
CCDC171Q6TFL3 Y_RNA.212-201ENST00000364177 102 ntBASIC-1.41□□□□□ -2.64
CCDC171Q6TFL3 Y_RNA.231-201ENST00000364358 102 ntBASIC-1.41□□□□□ -2.64
CCDC171Q6TFL3 RNU6-20P-201ENST00000384106 107 ntBASIC-1.41□□□□□ -2.64
CCDC171Q6TFL3 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.41□□□□□ -2.64
CCDC171Q6TFL3 AL603914.1-201ENST00000401964 204 ntBASIC-1.41□□□□□ -2.64
CCDC171Q6TFL3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.41□□□□□ -2.64
CCDC171Q6TFL3 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.41□□□□□ -2.64
CCDC171Q6TFL3 MIR3920-201ENST00000581751 86 ntBASIC-1.41□□□□□ -2.64
CCDC171Q6TFL3 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.41□□□□□ -2.64
CCDC171Q6TFL3 Y_RNA.169-201ENST00000363745 96 ntBASIC-1.42□□□□□ -2.64
CCDC171Q6TFL3 SNORD116-11-201ENST00000383882 92 ntBASIC-1.42□□□□□ -2.64
CCDC171Q6TFL3 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.42□□□□□ -2.64
CCDC171Q6TFL3 AC091951.2-201ENST00000500762 203 ntBASIC-1.42□□□□□ -2.64
CCDC171Q6TFL3 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.42□□□□□ -2.64
CCDC171Q6TFL3 RNU2-31P-201ENST00000516954 155 ntBASIC-1.42□□□□□ -2.64
CCDC171Q6TFL3 MRPS36P3-201ENST00000519284 130 ntBASIC-1.42□□□□□ -2.64
CCDC171Q6TFL3 AP000676.1-201ENST00000533307 52 ntBASIC-1.42□□□□□ -2.64
CCDC171Q6TFL3 MIR3179-1-201ENST00000578940 84 ntBASIC-1.42□□□□□ -2.64
CCDC171Q6TFL3 MIR3179-2-201ENST00000579107 84 ntBASIC-1.42□□□□□ -2.64
CCDC171Q6TFL3 MIR3179-3-201ENST00000579566 84 ntBASIC-1.42□□□□□ -2.64
CCDC171Q6TFL3 MIR3179-4-201ENST00000617599 84 ntBASIC-1.42□□□□□ -2.64
CCDC171Q6TFL3 RNU4-32P-201ENST00000363404 141 ntBASIC-1.43□□□□□ -2.64
CCDC171Q6TFL3 RNU4-16P-201ENST00000364737 141 ntBASIC-1.43□□□□□ -2.64
CCDC171Q6TFL3 MIR518B-201ENST00000385127 83 ntBASIC-1.43□□□□□ -2.64
CCDC171Q6TFL3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.43□□□□□ -2.64
CCDC171Q6TFL3 MTND1P27-201ENST00000451117 902 ntBASIC-1.43□□□□□ -2.64
CCDC171Q6TFL3 AC098826.2-201ENST00000452011 651 ntBASIC-1.43□□□□□ -2.64
CCDC171Q6TFL3 AC083798.1-201ENST00000472671 131 ntBASIC-1.43□□□□□ -2.64
CCDC171Q6TFL3 YWHAEP2-201ENST00000580066 112 ntBASIC-1.43□□□□□ -2.64
CCDC171Q6TFL3 MIR548H5-201ENST00000580314 60 ntBASIC-1.43□□□□□ -2.64
CCDC171Q6TFL3 AC005014.2-201ENST00000607795 599 ntBASIC-1.43□□□□□ -2.64
CCDC171Q6TFL3 AC027449.1-201ENST00000608890 407 ntBASIC-1.43□□□□□ -2.64
CCDC171Q6TFL3 RNU6-502P-201ENST00000362419 108 ntBASIC-1.44□□□□□ -2.64
CCDC171Q6TFL3 SNORD115-44-201ENST00000365391 82 ntBASIC-1.44□□□□□ -2.64
CCDC171Q6TFL3 SNORA18-201ENST00000384416 132 ntBASIC-1.44□□□□□ -2.64
CCDC171Q6TFL3 MIR517B-201ENST00000385102 67 ntBASIC-1.44□□□□□ -2.64
CCDC171Q6TFL3 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.44□□□□□ -2.64
CCDC171Q6TFL3 AC060788.1-201ENST00000521318 469 ntBASIC-1.44□□□□□ -2.64
CCDC171Q6TFL3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.44□□□□□ -2.64
CCDC171Q6TFL3 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.44□□□□□ -2.64
CCDC171Q6TFL3 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-1.44□□□□□ -2.64
CCDC171Q6TFL3 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.44□□□□□ -2.64
CCDC171Q6TFL3 AC069503.3-201ENST00000618674 145 ntBASIC-1.44□□□□□ -2.64
CCDC171Q6TFL3 AF246928.1-201ENST00000623768 87 ntBASIC-1.44□□□□□ -2.64
CCDC171Q6TFL3 RNA5SP192-201ENST00000364404 120 ntBASIC-1.45□□□□□ -2.64
CCDC171Q6TFL3 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.45□□□□□ -2.64
CCDC171Q6TFL3 MIR548A2-201ENST00000384956 97 ntBASIC-1.45□□□□□ -2.64
CCDC171Q6TFL3 RNU6-648P-201ENST00000410190 107 ntBASIC-1.45□□□□□ -2.64
CCDC171Q6TFL3 SNX3P1X-201ENST00000414887 175 ntBASIC-1.45□□□□□ -2.64
CCDC171Q6TFL3 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-1.45□□□□□ -2.64
CCDC171Q6TFL3 RNU7-125P-201ENST00000458760 62 ntBASIC-1.45□□□□□ -2.64
CCDC171Q6TFL3 RNU7-74P-201ENST00000459104 62 ntBASIC-1.45□□□□□ -2.64
CCDC171Q6TFL3 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.45□□□□□ -2.64
CCDC171Q6TFL3 MIR3115-201ENST00000577915 68 ntBASIC-1.45□□□□□ -2.64
CCDC171Q6TFL3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.45□□□□□ -2.64
CCDC171Q6TFL3 DISC2.1-201ENST00000612827 205 ntBASIC-1.45□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 232.8 ms