Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 MIR330-201ENST00000362196 94 ntBASIC0.4□□□□□ -2.35
ATL3Q6DD88 Y_RNA.37-201ENST00000362606 108 ntBASIC0.4□□□□□ -2.35
ATL3Q6DD88 Y_RNA.241-201ENST00000364470 117 ntBASIC0.4□□□□□ -2.35
ATL3Q6DD88 RNU4-45P-201ENST00000365469 141 ntBASIC0.4□□□□□ -2.35
ATL3Q6DD88 Y_RNA.394-201ENST00000383942 103 ntBASIC0.4□□□□□ -2.35
ATL3Q6DD88 RNU6-662P-201ENST00000384253 104 ntBASIC0.4□□□□□ -2.35
ATL3Q6DD88 MIR518F-201ENST00000384973 87 ntBASIC0.4□□□□□ -2.35
ATL3Q6DD88 MIR526A2-201ENST00000390198 65 ntBASIC0.4□□□□□ -2.35
ATL3Q6DD88 RNU6-101P-201ENST00000410323 104 ntBASIC0.4□□□□□ -2.35
ATL3Q6DD88 AL358176.2-201ENST00000425769 204 ntBASIC0.4□□□□□ -2.35
ATL3Q6DD88 AC015818.7-201ENST00000428754 109 ntBASIC0.4□□□□□ -2.35
ATL3Q6DD88 AC087499.7-201ENST00000441958 109 ntBASIC0.4□□□□□ -2.35
ATL3Q6DD88 RNU6-977P-201ENST00000516411 103 ntBASIC0.4□□□□□ -2.35
ATL3Q6DD88 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.4□□□□□ -2.35
ATL3Q6DD88 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.4□□□□□ -2.35
ATL3Q6DD88 AL008718.3-201ENST00000610217 321 ntBASIC0.4□□□□□ -2.35
ATL3Q6DD88 MIR18A-201ENST00000362310 71 ntBASIC0.39□□□□□ -2.35
ATL3Q6DD88 Y_RNA.14-201ENST00000362415 103 ntBASIC0.39□□□□□ -2.35
ATL3Q6DD88 Y_RNA.26-201ENST00000362539 101 ntBASIC0.39□□□□□ -2.35
ATL3Q6DD88 Y_RNA.276-201ENST00000364732 109 ntBASIC0.39□□□□□ -2.35
ATL3Q6DD88 RNU6-806P-201ENST00000365147 105 ntBASIC0.39□□□□□ -2.35
ATL3Q6DD88 SNORD61-201ENST00000384252 73 ntBASIC0.39□□□□□ -2.35
ATL3Q6DD88 MIR520H-201ENST00000385126 88 ntBASIC0.39□□□□□ -2.35
ATL3Q6DD88 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.39□□□□□ -2.35
ATL3Q6DD88 MTND4LP30-201ENST00000454092 297 ntBASIC0.39□□□□□ -2.35
ATL3Q6DD88 RNU6-693P-201ENST00000516134 107 ntBASIC0.39□□□□□ -2.35
ATL3Q6DD88 MIR4662B-201ENST00000579498 81 ntBASIC0.39□□□□□ -2.35
ATL3Q6DD88 MIR4676-201ENST00000583078 72 ntBASIC0.39□□□□□ -2.35
ATL3Q6DD88 MIR6740-201ENST00000618268 113 ntBASIC0.39□□□□□ -2.35
ATL3Q6DD88 AC134878.1-201ENST00000619901 243 ntBASIC0.39□□□□□ -2.35
ATL3Q6DD88 AC090625.1-201ENST00000357130 210 ntBASIC0.38□□□□□ -2.35
ATL3Q6DD88 UBE2WP1-201ENST00000362030 340 ntBASIC0.38□□□□□ -2.35
ATL3Q6DD88 VTRNA1-3-201ENST00000365645 89 ntBASIC0.38□□□□□ -2.35
ATL3Q6DD88 SNORD24-201ENST00000383884 75 ntBASIC0.38□□□□□ -2.35
ATL3Q6DD88 SNORA36.2-201ENST00000384004 127 ntBASIC0.38□□□□□ -2.35
ATL3Q6DD88 MIR520F-201ENST00000384824 87 ntBASIC0.38□□□□□ -2.35
ATL3Q6DD88 MIR140-201ENST00000385282 100 ntBASIC0.38□□□□□ -2.35
ATL3Q6DD88 RPL21P38-201ENST00000418090 167 ntBASIC0.38□□□□□ -2.35
ATL3Q6DD88 HMGN1P33-201ENST00000432945 451 ntBASIC0.38□□□□□ -2.35
ATL3Q6DD88 Y_RNA.631-201ENST00000459607 101 ntBASIC0.38□□□□□ -2.35
ATL3Q6DD88 MIR4771-2-201ENST00000577758 74 ntBASIC0.38□□□□□ -2.35
ATL3Q6DD88 MIR4771-1-201ENST00000582617 74 ntBASIC0.38□□□□□ -2.35
ATL3Q6DD88 RNU6-888P-201ENST00000363010 101 ntBASIC0.37□□□□□ -2.35
ATL3Q6DD88 Y_RNA.128-201ENST00000363391 112 ntBASIC0.37□□□□□ -2.35
ATL3Q6DD88 RNU4-10P-201ENST00000364383 140 ntBASIC0.37□□□□□ -2.35
ATL3Q6DD88 SNORA22B-201ENST00000383876 138 ntBASIC0.37□□□□□ -2.35
ATL3Q6DD88 SNORD38B-201ENST00000384690 67 ntBASIC0.37□□□□□ -2.35
ATL3Q6DD88 AC022028.1-201ENST00000412054 408 ntBASIC0.37□□□□□ -2.35
ATL3Q6DD88 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.37□□□□□ -2.35
ATL3Q6DD88 MIR18B-201ENST00000454574 71 ntBASIC0.37□□□□□ -2.35
ATL3Q6DD88 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.37□□□□□ -2.35
ATL3Q6DD88 RNU7-62P-201ENST00000458856 62 ntBASIC0.37□□□□□ -2.35
ATL3Q6DD88 MIR3612-201ENST00000579753 87 ntBASIC0.37□□□□□ -2.35
ATL3Q6DD88 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.37□□□□□ -2.35
ATL3Q6DD88 AL160413.1-201ENST00000622780 310 ntBASIC0.37□□□□□ -2.35
ATL3Q6DD88 SNORD38B-202ENST00000625943 69 ntBASIC0.37□□□□□ -2.35
ATL3Q6DD88 MIR367-201ENST00000362299 68 ntBASIC0.36□□□□□ -2.35
ATL3Q6DD88 Y_RNA.19-201ENST00000362462 99 ntBASIC0.36□□□□□ -2.35
ATL3Q6DD88 Y_RNA.66-201ENST00000362862 102 ntBASIC0.36□□□□□ -2.35
ATL3Q6DD88 Y_RNA.293-201ENST00000364908 93 ntBASIC0.36□□□□□ -2.35
ATL3Q6DD88 SNORA27-201ENST00000384323 126 ntBASIC0.36□□□□□ -2.35
ATL3Q6DD88 Y_RNA.572-201ENST00000384757 98 ntBASIC0.36□□□□□ -2.35
ATL3Q6DD88 MIR626-201ENST00000385032 94 ntBASIC0.36□□□□□ -2.35
ATL3Q6DD88 MIR1197-201ENST00000408818 88 ntBASIC0.36□□□□□ -2.35
ATL3Q6DD88 RNU6-602P-201ENST00000411155 105 ntBASIC0.36□□□□□ -2.35
ATL3Q6DD88 SNORD36C-201ENST00000516733 66 ntBASIC0.36□□□□□ -2.35
ATL3Q6DD88 RNU6-988P-201ENST00000519081 107 ntBASIC0.36□□□□□ -2.35
ATL3Q6DD88 AC113195.1-201ENST00000579952 141 ntBASIC0.36□□□□□ -2.35
ATL3Q6DD88 AC134503.1-201ENST00000633048 54 ntBASIC0.36□□□□□ -2.35
ATL3Q6DD88 Y_RNA.16-201ENST00000362421 102 ntBASIC0.35□□□□□ -2.35
ATL3Q6DD88 Y_RNA.64-201ENST00000362845 102 ntBASIC0.35□□□□□ -2.35
ATL3Q6DD88 Y_RNA.158-201ENST00000363651 101 ntBASIC0.35□□□□□ -2.35
ATL3Q6DD88 SNORA63C-201ENST00000364578 129 ntBASIC0.35□□□□□ -2.35
ATL3Q6DD88 Y_RNA.280-201ENST00000364765 112 ntBASIC0.35□□□□□ -2.35
ATL3Q6DD88 MIR563-201ENST00000385080 79 ntBASIC0.35□□□□□ -2.35
ATL3Q6DD88 SNORA53-201ENST00000391141 249 ntBASIC0.35□□□□□ -2.35
ATL3Q6DD88 snoU13.2-201ENST00000459201 104 ntBASIC0.35□□□□□ -2.35
ATL3Q6DD88 RPS29P24-201ENST00000486345 171 ntBASIC0.35□□□□□ -2.35
ATL3Q6DD88 SNORA68.3-201ENST00000515906 83 ntBASIC0.35□□□□□ -2.35
ATL3Q6DD88 Y_RNA.681-201ENST00000516445 113 ntBASIC0.35□□□□□ -2.35
ATL3Q6DD88 Y_RNA.711-201ENST00000516993 102 ntBASIC0.35□□□□□ -2.35
ATL3Q6DD88 AC131281.1-201ENST00000522984 164 ntBASIC0.35□□□□□ -2.35
ATL3Q6DD88 AC100767.1-201ENST00000528178 123 ntBASIC0.35□□□□□ -2.35
ATL3Q6DD88 Y_RNA.802-201ENST00000614892 130 ntBASIC0.35□□□□□ -2.35
ATL3Q6DD88 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
ATL3Q6DD88 SNORA25.1-201ENST00000362326 128 ntBASIC0.34□□□□□ -2.36
ATL3Q6DD88 Y_RNA.24-201ENST00000362508 103 ntBASIC0.34□□□□□ -2.36
ATL3Q6DD88 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
ATL3Q6DD88 Y_RNA.455-201ENST00000384230 98 ntBASIC0.34□□□□□ -2.36
ATL3Q6DD88 SNORD100-201ENST00000408573 76 ntBASIC0.34□□□□□ -2.36
ATL3Q6DD88 RNA5SP193-201ENST00000410353 107 ntBASIC0.34□□□□□ -2.36
ATL3Q6DD88 AF228730.3-201ENST00000436691 102 ntBASIC0.34□□□□□ -2.36
ATL3Q6DD88 AL731563.1-201ENST00000442202 214 ntBASIC0.34□□□□□ -2.36
ATL3Q6DD88 AL117351.2-201ENST00000513571 157 ntBASIC0.34□□□□□ -2.36
ATL3Q6DD88 RNY3P15-201ENST00000516297 97 ntBASIC0.34□□□□□ -2.36
ATL3Q6DD88 RNU6-126P-201ENST00000516685 103 ntBASIC0.34□□□□□ -2.36
ATL3Q6DD88 SNORA40.15-201ENST00000516884 107 ntBASIC0.34□□□□□ -2.36
ATL3Q6DD88 RNU6-365P-201ENST00000517113 106 ntBASIC0.34□□□□□ -2.36
ATL3Q6DD88 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.34□□□□□ -2.36
ATL3Q6DD88 AP003733.2-201ENST00000529409 171 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 161.6 ms