Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RNU11-2P-201ENST00000516898 142 ntBASIC1.43□□□□□ -2.18
RNF220Q5VTB9 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.43□□□□□ -2.18
RNF220Q5VTB9 AL022345.2-201ENST00000606307 135 ntBASIC1.43□□□□□ -2.18
RNF220Q5VTB9 FTX_2.1-201ENST00000618816 94 ntBASIC1.43□□□□□ -2.18
RNF220Q5VTB9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.43□□□□□ -2.18
RNF220Q5VTB9 MIR26B-201ENST00000362251 77 ntBASIC1.42□□□□□ -2.18
RNF220Q5VTB9 Y_RNA.351-201ENST00000365436 96 ntBASIC1.42□□□□□ -2.18
RNF220Q5VTB9 Y_RNA.363-201ENST00000365529 113 ntBASIC1.42□□□□□ -2.18
RNF220Q5VTB9 MIR222-201ENST00000384992 110 ntBASIC1.42□□□□□ -2.18
RNF220Q5VTB9 RNU6-1135P-201ENST00000411083 103 ntBASIC1.42□□□□□ -2.18
RNF220Q5VTB9 AL591704.2-201ENST00000421658 181 ntBASIC1.42□□□□□ -2.18
RNF220Q5VTB9 RNU7-73P-201ENST00000458743 63 ntBASIC1.42□□□□□ -2.18
RNF220Q5VTB9 RNU6-998P-201ENST00000515894 101 ntBASIC1.42□□□□□ -2.18
RNF220Q5VTB9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.42□□□□□ -2.18
RNF220Q5VTB9 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.42□□□□□ -2.18
RNF220Q5VTB9 AC019288.1-201ENST00000557918 224 ntBASIC1.42□□□□□ -2.18
RNF220Q5VTB9 MIR4769-201ENST00000584126 77 ntBASIC1.42□□□□□ -2.18
RNF220Q5VTB9 AC098479.1-201ENST00000609225 154 ntBASIC1.42□□□□□ -2.18
RNF220Q5VTB9 MIR376A2-201ENST00000636782 80 ntBASIC1.42□□□□□ -2.18
RNF220Q5VTB9 RNA5SP432-201ENST00000362480 116 ntBASIC1.41□□□□□ -2.18
RNF220Q5VTB9 Y_RNA.454-201ENST00000384224 113 ntBASIC1.41□□□□□ -2.18
RNF220Q5VTB9 MIR1185-1-201ENST00000408598 86 ntBASIC1.41□□□□□ -2.18
RNF220Q5VTB9 snoU13.23-201ENST00000458863 104 ntBASIC1.41□□□□□ -2.18
RNF220Q5VTB9 SNORD79.1-201ENST00000516069 84 ntBASIC1.41□□□□□ -2.18
RNF220Q5VTB9 AC015712.3-201ENST00000559380 164 ntBASIC1.41□□□□□ -2.18
RNF220Q5VTB9 MIR3646-201ENST00000578301 84 ntBASIC1.41□□□□□ -2.18
RNF220Q5VTB9 MIR548AO-201ENST00000579992 96 ntBASIC1.41□□□□□ -2.18
RNF220Q5VTB9 MIR6844-201ENST00000637122 62 ntBASIC1.41□□□□□ -2.18
RNF220Q5VTB9 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
RNF220Q5VTB9 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
RNF220Q5VTB9 SNORA25.8-201ENST00000364831 128 ntBASIC1.4□□□□□ -2.19
RNF220Q5VTB9 MIR517C-201ENST00000385103 95 ntBASIC1.4□□□□□ -2.19
RNF220Q5VTB9 SNORD12-201ENST00000391002 90 ntBASIC1.4□□□□□ -2.19
RNF220Q5VTB9 AL392103.1-201ENST00000447000 198 ntBASIC1.4□□□□□ -2.19
RNF220Q5VTB9 AC074198.2-201ENST00000508153 258 ntBASIC1.4□□□□□ -2.19
RNF220Q5VTB9 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.4□□□□□ -2.19
RNF220Q5VTB9 MIR342-201ENST00000362212 99 ntBASIC1.39□□□□□ -2.19
RNF220Q5VTB9 Y_RNA.272-201ENST00000364696 102 ntBASIC1.39□□□□□ -2.19
RNF220Q5VTB9 MIR150-201ENST00000385048 84 ntBASIC1.39□□□□□ -2.19
RNF220Q5VTB9 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
RNF220Q5VTB9 SNORA75.5-201ENST00000391291 81 ntBASIC1.39□□□□□ -2.19
RNF220Q5VTB9 MIR1304-201ENST00000408243 91 ntBASIC1.39□□□□□ -2.19
RNF220Q5VTB9 MIR1302-7-201ENST00000408841 72 ntBASIC1.39□□□□□ -2.19
RNF220Q5VTB9 RNU2-11P-201ENST00000459191 187 ntBASIC1.39□□□□□ -2.19
RNF220Q5VTB9 RNU7-70P-201ENST00000516941 66 ntBASIC1.39□□□□□ -2.19
RNF220Q5VTB9 DNAJC19P2-201ENST00000593340 302 ntBASIC1.39□□□□□ -2.19
RNF220Q5VTB9 AP000942.3-201ENST00000603702 160 ntBASIC1.39□□□□□ -2.19
RNF220Q5VTB9 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.39□□□□□ -2.19
RNF220Q5VTB9 AL353997.5-201ENST00000618886 171 ntBASIC1.39□□□□□ -2.19
RNF220Q5VTB9 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
RNF220Q5VTB9 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
RNF220Q5VTB9 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
RNF220Q5VTB9 MIR302B-201ENST00000362188 73 ntBASIC1.38□□□□□ -2.19
RNF220Q5VTB9 Y_RNA.150-201ENST00000363562 102 ntBASIC1.38□□□□□ -2.19
RNF220Q5VTB9 RNU6-396P-201ENST00000365369 105 ntBASIC1.38□□□□□ -2.19
RNF220Q5VTB9 RNU6-886P-201ENST00000384319 105 ntBASIC1.38□□□□□ -2.19
RNF220Q5VTB9 MIR764-201ENST00000390811 85 ntBASIC1.38□□□□□ -2.19
RNF220Q5VTB9 CYCSP49-201ENST00000420810 319 ntBASIC1.38□□□□□ -2.19
RNF220Q5VTB9 SEPT14P17-201ENST00000617978 177 ntBASIC1.38□□□□□ -2.19
RNF220Q5VTB9 AC027335.2-201ENST00000624030 375 ntBASIC1.38□□□□□ -2.19
RNF220Q5VTB9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
RNF220Q5VTB9 RNA5SP99-201ENST00000364020 114 ntBASIC1.37□□□□□ -2.19
RNF220Q5VTB9 RNU6-1082P-201ENST00000364574 107 ntBASIC1.37□□□□□ -2.19
RNF220Q5VTB9 RNA5SP190-201ENST00000365222 118 ntBASIC1.37□□□□□ -2.19
RNF220Q5VTB9 RNU6-913P-201ENST00000390913 95 ntBASIC1.37□□□□□ -2.19
RNF220Q5VTB9 SNORA75.2-201ENST00000391138 150 ntBASIC1.37□□□□□ -2.19
RNF220Q5VTB9 SNORA75.3-201ENST00000391231 150 ntBASIC1.37□□□□□ -2.19
RNF220Q5VTB9 MIR1323-201ENST00000408090 73 ntBASIC1.37□□□□□ -2.19
RNF220Q5VTB9 RNU7-21P-201ENST00000459430 62 ntBASIC1.37□□□□□ -2.19
RNF220Q5VTB9 RNU6-237P-201ENST00000515985 71 ntBASIC1.37□□□□□ -2.19
RNF220Q5VTB9 SNORD53B-201ENST00000577887 78 ntBASIC1.37□□□□□ -2.19
RNF220Q5VTB9 RNU6-818P-201ENST00000364837 108 ntBASIC1.36□□□□□ -2.19
RNF220Q5VTB9 Y_RNA.330-201ENST00000365230 109 ntBASIC1.36□□□□□ -2.19
RNF220Q5VTB9 RNU6-1336P-201ENST00000383886 109 ntBASIC1.36□□□□□ -2.19
RNF220Q5VTB9 Y_RNA.555-201ENST00000384673 110 ntBASIC1.36□□□□□ -2.19
RNF220Q5VTB9 SNORD37.2-201ENST00000391075 66 ntBASIC1.36□□□□□ -2.19
RNF220Q5VTB9 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.36□□□□□ -2.19
RNF220Q5VTB9 RNU7-90P-201ENST00000459216 62 ntBASIC1.36□□□□□ -2.19
RNF220Q5VTB9 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
RNF220Q5VTB9 MIR2115-201ENST00000516657 100 ntBASIC1.36□□□□□ -2.19
RNF220Q5VTB9 RNU6-1149P-201ENST00000516810 97 ntBASIC1.36□□□□□ -2.19
RNF220Q5VTB9 SCARNA15-202ENST00000516881 127 ntBASIC1.36□□□□□ -2.19
RNF220Q5VTB9 SNORA31.24-201ENST00000517232 57 ntBASIC1.36□□□□□ -2.19
RNF220Q5VTB9 MIR8055-201ENST00000610739 97 ntBASIC1.36□□□□□ -2.19
RNF220Q5VTB9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
RNF220Q5VTB9 MIR618-201ENST00000385287 98 ntBASIC1.35□□□□□ -2.19
RNF220Q5VTB9 RNU6-482P-201ENST00000391068 107 ntBASIC1.35□□□□□ -2.19
RNF220Q5VTB9 SNORA67.6-201ENST00000391093 99 ntBASIC1.35□□□□□ -2.19
RNF220Q5VTB9 PCNPP3-201ENST00000393579 471 ntBASIC1.35□□□□□ -2.19
RNF220Q5VTB9 MIR548I3-201ENST00000408378 149 ntBASIC1.35□□□□□ -2.19
RNF220Q5VTB9 RNU6-588P-201ENST00000410281 105 ntBASIC1.35□□□□□ -2.19
RNF220Q5VTB9 RNU6-394P-201ENST00000410735 107 ntBASIC1.35□□□□□ -2.19
RNF220Q5VTB9 MRPL35P3-201ENST00000421557 364 ntBASIC1.35□□□□□ -2.19
RNF220Q5VTB9 AC131055.1-201ENST00000584626 316 ntBASIC1.35□□□□□ -2.19
RNF220Q5VTB9 AC091932.4-201ENST00000623386 200 ntBASIC1.35□□□□□ -2.19
RNF220Q5VTB9 AL596211.1-201ENST00000569873 2277 ntBASIC1.35□□□□□ -2.19
RNF220Q5VTB9 MTND5P32-201ENST00000560711 1802 ntBASIC1.34□□□□□ -2.19
RNF220Q5VTB9 Y_RNA.140-201ENST00000363474 103 ntBASIC1.34□□□□□ -2.19
RNF220Q5VTB9 RNU1-133P-201ENST00000364867 167 ntBASIC1.34□□□□□ -2.19
RNF220Q5VTB9 Y_RNA.580-201ENST00000391004 95 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 190.2 ms