Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 PIGPP4-201ENST00000584447 307 ntBASIC-1.45□□□□□ -2.64
RIF1Q5UIP0 AP001542.1-201ENST00000591314 200 ntBASIC-1.45□□□□□ -2.64
RIF1Q5UIP0 AP001836.1-201ENST00000604675 523 ntBASIC-1.45□□□□□ -2.64
RIF1Q5UIP0 AC087752.4-201ENST00000605911 462 ntBASIC-1.45□□□□□ -2.64
RIF1Q5UIP0 MIR6888-201ENST00000621977 67 ntBASIC-1.45□□□□□ -2.64
RIF1Q5UIP0 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.45□□□□□ -2.64
RIF1Q5UIP0 RNU6-131P-201ENST00000391144 107 ntBASIC-1.45□□□□□ -2.64
RIF1Q5UIP0 MTCYBP4-201ENST00000401524 249 ntBASIC-1.45□□□□□ -2.64
RIF1Q5UIP0 AL008718.3-201ENST00000610217 321 ntBASIC-1.45□□□□□ -2.64
RIF1Q5UIP0 AC006435.5-201ENST00000624486 112 ntBASIC-1.45□□□□□ -2.64
RIF1Q5UIP0 AL669831.3-213ENST00000636676 183 ntBASIC-1.45□□□□□ -2.64
RIF1Q5UIP0 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.46□□□□□ -2.64
RIF1Q5UIP0 RNA5SP133-201ENST00000363368 119 ntBASIC-1.46□□□□□ -2.64
RIF1Q5UIP0 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.46□□□□□ -2.64
RIF1Q5UIP0 SNORD19-201ENST00000391191 68 ntBASIC-1.46□□□□□ -2.64
RIF1Q5UIP0 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.46□□□□□ -2.64
RIF1Q5UIP0 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-1.46□□□□□ -2.64
RIF1Q5UIP0 AC002542.1-201ENST00000440683 193 ntBASIC-1.46□□□□□ -2.64
RIF1Q5UIP0 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.46□□□□□ -2.64
RIF1Q5UIP0 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.46□□□□□ -2.64
RIF1Q5UIP0 RNU6-278P-201ENST00000390945 109 ntBASIC-1.46□□□□□ -2.64
RIF1Q5UIP0 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.46□□□□□ -2.64
RIF1Q5UIP0 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-1.46□□□□□ -2.64
RIF1Q5UIP0 AC026414.1-201ENST00000504046 698 ntBASIC-1.46□□□□□ -2.64
RIF1Q5UIP0 ACA59.1-201ENST00000515966 143 ntBASIC-1.46□□□□□ -2.64
RIF1Q5UIP0 RNU6-344P-201ENST00000516635 111 ntBASIC-1.46□□□□□ -2.64
RIF1Q5UIP0 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.46□□□□□ -2.64
RIF1Q5UIP0 MTND1P24-201ENST00000552175 861 ntBASIC-1.46□□□□□ -2.64
RIF1Q5UIP0 AL731768.1-201ENST00000603124 139 ntBASIC-1.46□□□□□ -2.64
RIF1Q5UIP0 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.47□□□□□ -2.64
RIF1Q5UIP0 RNU6-1286P-201ENST00000383871 107 ntBASIC-1.47□□□□□ -2.64
RIF1Q5UIP0 RNU6-641P-201ENST00000384006 107 ntBASIC-1.47□□□□□ -2.64
RIF1Q5UIP0 AC104563.1-201ENST00000476147 376 ntBASIC-1.47□□□□□ -2.64
RIF1Q5UIP0 RNU1-54P-201ENST00000517181 120 ntBASIC-1.47□□□□□ -2.64
RIF1Q5UIP0 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.47□□□□□ -2.64
RIF1Q5UIP0 SNORD114-4-201ENST00000363962 75 ntBASIC-1.47□□□□□ -2.65
RIF1Q5UIP0 RNU6-442P-201ENST00000383968 104 ntBASIC-1.47□□□□□ -2.65
RIF1Q5UIP0 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.47□□□□□ -2.65
RIF1Q5UIP0 MIR578-201ENST00000384828 96 ntBASIC-1.47□□□□□ -2.65
RIF1Q5UIP0 MIR548E-201ENST00000408287 88 ntBASIC-1.47□□□□□ -2.65
RIF1Q5UIP0 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.47□□□□□ -2.65
RIF1Q5UIP0 MTCO3P19-201ENST00000415864 321 ntBASIC-1.47□□□□□ -2.65
RIF1Q5UIP0 MTCO2P27-201ENST00000420740 428 ntBASIC-1.47□□□□□ -2.65
RIF1Q5UIP0 MTCO3P39-201ENST00000514812 518 ntBASIC-1.47□□□□□ -2.65
RIF1Q5UIP0 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.47□□□□□ -2.65
RIF1Q5UIP0 AC008507.2-201ENST00000588402 1176 ntBASIC-1.47□□□□□ -2.65
RIF1Q5UIP0 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.48□□□□□ -2.65
RIF1Q5UIP0 SNORA62.4-201ENST00000365504 151 ntBASIC-1.48□□□□□ -2.65
RIF1Q5UIP0 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.48□□□□□ -2.65
RIF1Q5UIP0 SNRPGP7-201ENST00000469016 106 ntBASIC-1.48□□□□□ -2.65
RIF1Q5UIP0 RNU6-916P-201ENST00000516088 109 ntBASIC-1.48□□□□□ -2.65
RIF1Q5UIP0 RNU6-958P-201ENST00000516995 106 ntBASIC-1.48□□□□□ -2.65
RIF1Q5UIP0 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-1.48□□□□□ -2.65
RIF1Q5UIP0 SNORD115-8-201ENST00000363856 82 ntBASIC-1.48□□□□□ -2.65
RIF1Q5UIP0 RNU6-853P-201ENST00000364306 107 ntBASIC-1.48□□□□□ -2.65
RIF1Q5UIP0 SNORD115-38-201ENST00000365037 82 ntBASIC-1.48□□□□□ -2.65
RIF1Q5UIP0 Y_RNA.409-201ENST00000383990 98 ntBASIC-1.48□□□□□ -2.65
RIF1Q5UIP0 SNORA26.6-201ENST00000391256 115 ntBASIC-1.48□□□□□ -2.65
RIF1Q5UIP0 NDUFB1P2-201ENST00000449477 176 ntBASIC-1.48□□□□□ -2.65
RIF1Q5UIP0 RNU4-58P-201ENST00000363192 141 ntBASIC-1.49□□□□□ -2.65
RIF1Q5UIP0 RNU6-767P-201ENST00000384132 107 ntBASIC-1.49□□□□□ -2.65
RIF1Q5UIP0 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.49□□□□□ -2.65
RIF1Q5UIP0 FGF7P4-201ENST00000509595 295 ntBASIC-1.49□□□□□ -2.65
RIF1Q5UIP0 AC109479.2-201ENST00000517842 174 ntBASIC-1.49□□□□□ -2.65
RIF1Q5UIP0 MTND1P36-201ENST00000522384 936 ntBASIC-1.49□□□□□ -2.65
RIF1Q5UIP0 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-1.49□□□□□ -2.65
RIF1Q5UIP0 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.49□□□□□ -2.65
RIF1Q5UIP0 SNORD115-39-201ENST00000363694 82 ntBASIC-1.49□□□□□ -2.65
RIF1Q5UIP0 RNU6-1093P-201ENST00000391194 107 ntBASIC-1.49□□□□□ -2.65
RIF1Q5UIP0 snoU109.3-201ENST00000459477 145 ntBASIC-1.49□□□□□ -2.65
RIF1Q5UIP0 AC008628.2-201ENST00000502605 298 ntBASIC-1.49□□□□□ -2.65
RIF1Q5UIP0 AC068137.4-201ENST00000638485 296 ntBASIC-1.49□□□□□ -2.65
RIF1Q5UIP0 AC099654.12-201ENST00000639868 649 ntBASIC-1.49□□□□□ -2.65
RIF1Q5UIP0 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.5□□□□□ -2.65
RIF1Q5UIP0 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.5□□□□□ -2.65
RIF1Q5UIP0 SNORA51.5-201ENST00000384126 131 ntBASIC-1.5□□□□□ -2.65
RIF1Q5UIP0 RNU6-80P-201ENST00000384195 107 ntBASIC-1.5□□□□□ -2.65
RIF1Q5UIP0 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.5□□□□□ -2.65
RIF1Q5UIP0 SNORD116-23-201ENST00000384645 92 ntBASIC-1.5□□□□□ -2.65
RIF1Q5UIP0 RNU6-21P-201ENST00000384710 107 ntBASIC-1.5□□□□□ -2.65
RIF1Q5UIP0 MIR208B-201ENST00000401172 77 ntBASIC-1.5□□□□□ -2.65
RIF1Q5UIP0 AC113618.1-201ENST00000416747 285 ntBASIC-1.5□□□□□ -2.65
RIF1Q5UIP0 AF228730.4-201ENST00000421457 183 ntBASIC-1.5□□□□□ -2.65
RIF1Q5UIP0 GPR143P-201ENST00000434155 205 ntBASIC-1.5□□□□□ -2.65
RIF1Q5UIP0 UBE2V1P12-201ENST00000503954 474 ntBASIC-1.5□□□□□ -2.65
RIF1Q5UIP0 U6.42-201ENST00000618440 107 ntBASIC-1.5□□□□□ -2.65
RIF1Q5UIP0 MIR16-1-201ENST00000385271 89 ntBASIC-1.5□□□□□ -2.65
RIF1Q5UIP0 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-1.5□□□□□ -2.65
RIF1Q5UIP0 MIR548I2-201ENST00000408348 149 ntBASIC-1.5□□□□□ -2.65
RIF1Q5UIP0 AC097635.1-201ENST00000450678 155 ntBASIC-1.5□□□□□ -2.65
RIF1Q5UIP0 SUMO2P5-201ENST00000506790 245 ntBASIC-1.5□□□□□ -2.65
RIF1Q5UIP0 MIR4293-201ENST00000584305 78 ntBASIC-1.5□□□□□ -2.65
RIF1Q5UIP0 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-1.5□□□□□ -2.65
RIF1Q5UIP0 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.5□□□□□ -2.65
RIF1Q5UIP0 Y_RNA.46-201ENST00000362695 102 ntBASIC-1.51□□□□□ -2.65
RIF1Q5UIP0 MIR599-201ENST00000385069 95 ntBASIC-1.51□□□□□ -2.65
RIF1Q5UIP0 MTATP6P19-201ENST00000413797 659 ntBASIC-1.51□□□□□ -2.65
RIF1Q5UIP0 AC012306.1-201ENST00000423267 114 ntBASIC-1.51□□□□□ -2.65
RIF1Q5UIP0 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.51□□□□□ -2.65
RIF1Q5UIP0 AC091179.3-201ENST00000474761 144 ntBASIC-1.51□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms