Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 MIR6715A-201ENST00000615929 79 ntBASIC1.28□□□□□ -2.2
ATPAF1Q5TC12 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
ATPAF1Q5TC12 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
ATPAF1Q5TC12 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.27□□□□□ -2.21
ATPAF1Q5TC12 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.27□□□□□ -2.21
ATPAF1Q5TC12 RNU6-682P-201ENST00000363843 106 ntBASIC1.27□□□□□ -2.21
ATPAF1Q5TC12 RNU1-42P-201ENST00000364033 160 ntBASIC1.27□□□□□ -2.21
ATPAF1Q5TC12 RNU6-60P-201ENST00000364792 103 ntBASIC1.27□□□□□ -2.21
ATPAF1Q5TC12 Y_RNA.330-201ENST00000365230 109 ntBASIC1.27□□□□□ -2.21
ATPAF1Q5TC12 RNU6-1292P-201ENST00000383856 107 ntBASIC1.27□□□□□ -2.21
ATPAF1Q5TC12 SNORA70.7-201ENST00000384159 133 ntBASIC1.27□□□□□ -2.21
ATPAF1Q5TC12 Y_RNA.785-201ENST00000384290 109 ntBASIC1.27□□□□□ -2.21
ATPAF1Q5TC12 MIR1304-201ENST00000408243 91 ntBASIC1.27□□□□□ -2.21
ATPAF1Q5TC12 AC002429.1-201ENST00000437672 148 ntBASIC1.27□□□□□ -2.21
ATPAF1Q5TC12 RNU7-21P-201ENST00000459430 62 ntBASIC1.27□□□□□ -2.21
ATPAF1Q5TC12 RNA5SP61-201ENST00000516453 100 ntBASIC1.27□□□□□ -2.21
ATPAF1Q5TC12 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.27□□□□□ -2.21
ATPAF1Q5TC12 AC008163.1-202ENST00000636004 2889 ntBASIC1.26□□□□□ -2.21
ATPAF1Q5TC12 MIR342-201ENST00000362212 99 ntBASIC1.26□□□□□ -2.21
ATPAF1Q5TC12 RNU6-1336P-201ENST00000383886 109 ntBASIC1.26□□□□□ -2.21
ATPAF1Q5TC12 RNU6-913P-201ENST00000390913 95 ntBASIC1.26□□□□□ -2.21
ATPAF1Q5TC12 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.26□□□□□ -2.21
ATPAF1Q5TC12 AL035398.1-201ENST00000430869 322 ntBASIC1.26□□□□□ -2.21
ATPAF1Q5TC12 snoU13.16-201ENST00000459350 104 ntBASIC1.26□□□□□ -2.21
ATPAF1Q5TC12 MIR4524B-201ENST00000581569 115 ntBASIC1.26□□□□□ -2.21
ATPAF1Q5TC12 MIR5197-201ENST00000583721 112 ntBASIC1.26□□□□□ -2.21
ATPAF1Q5TC12 SEPT14P17-201ENST00000617978 177 ntBASIC1.26□□□□□ -2.21
ATPAF1Q5TC12 AL353997.5-201ENST00000618886 171 ntBASIC1.26□□□□□ -2.21
ATPAF1Q5TC12 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
ATPAF1Q5TC12 SNORA25.7-201ENST00000364375 127 ntBASIC1.25□□□□□ -2.21
ATPAF1Q5TC12 Y_RNA.240-201ENST00000364469 95 ntBASIC1.25□□□□□ -2.21
ATPAF1Q5TC12 SNORD12-201ENST00000391002 90 ntBASIC1.25□□□□□ -2.21
ATPAF1Q5TC12 SNORA67.6-201ENST00000391093 99 ntBASIC1.25□□□□□ -2.21
ATPAF1Q5TC12 AC107027.2-201ENST00000512197 115 ntBASIC1.25□□□□□ -2.21
ATPAF1Q5TC12 RNU6-998P-201ENST00000515894 101 ntBASIC1.25□□□□□ -2.21
ATPAF1Q5TC12 RNA5SP404-201ENST00000517118 132 ntBASIC1.25□□□□□ -2.21
ATPAF1Q5TC12 SNORA31.24-201ENST00000517232 57 ntBASIC1.25□□□□□ -2.21
ATPAF1Q5TC12 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.25□□□□□ -2.21
ATPAF1Q5TC12 MIR3671-201ENST00000580455 88 ntBASIC1.25□□□□□ -2.21
ATPAF1Q5TC12 MIR6516-201ENST00000630554 81 ntBASIC1.25□□□□□ -2.21
ATPAF1Q5TC12 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
ATPAF1Q5TC12 Y_RNA.351-201ENST00000365436 96 ntBASIC1.24□□□□□ -2.21
ATPAF1Q5TC12 Y_RNA.357-201ENST00000365487 109 ntBASIC1.24□□□□□ -2.21
ATPAF1Q5TC12 RNU6-768P-201ENST00000384683 107 ntBASIC1.24□□□□□ -2.21
ATPAF1Q5TC12 RNU6-482P-201ENST00000391068 107 ntBASIC1.24□□□□□ -2.21
ATPAF1Q5TC12 RNA5SP127-201ENST00000411051 133 ntBASIC1.24□□□□□ -2.21
ATPAF1Q5TC12 RNU5E-9P-201ENST00000411164 104 ntBASIC1.24□□□□□ -2.21
ATPAF1Q5TC12 AC063976.4-201ENST00000421971 163 ntBASIC1.24□□□□□ -2.21
ATPAF1Q5TC12 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.24□□□□□ -2.21
ATPAF1Q5TC12 RNU2-11P-201ENST00000459191 187 ntBASIC1.24□□□□□ -2.21
ATPAF1Q5TC12 RNU7-96P-201ENST00000459535 64 ntBASIC1.24□□□□□ -2.21
ATPAF1Q5TC12 RNU7-53P-201ENST00000516705 60 ntBASIC1.24□□□□□ -2.21
ATPAF1Q5TC12 RNU11-2P-201ENST00000516898 142 ntBASIC1.24□□□□□ -2.21
ATPAF1Q5TC12 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.24□□□□□ -2.21
ATPAF1Q5TC12 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
ATPAF1Q5TC12 U8.1-201ENST00000362843 134 ntBASIC1.23□□□□□ -2.21
ATPAF1Q5TC12 RNU6-654P-201ENST00000364373 107 ntBASIC1.23□□□□□ -2.21
ATPAF1Q5TC12 Y_RNA.393-201ENST00000383936 102 ntBASIC1.23□□□□□ -2.21
ATPAF1Q5TC12 AC090844.1-201ENST00000422019 156 ntBASIC1.23□□□□□ -2.21
ATPAF1Q5TC12 RNU7-73P-201ENST00000458743 63 ntBASIC1.23□□□□□ -2.21
ATPAF1Q5TC12 AC074198.2-201ENST00000508153 258 ntBASIC1.23□□□□□ -2.21
ATPAF1Q5TC12 Y_RNA.662-201ENST00000516028 97 ntBASIC1.23□□□□□ -2.21
ATPAF1Q5TC12 RNU6-794P-201ENST00000517261 64 ntBASIC1.23□□□□□ -2.21
ATPAF1Q5TC12 Y_RNA.337-201ENST00000365312 102 ntBASIC1.22□□□□□ -2.21
ATPAF1Q5TC12 RNU6-396P-201ENST00000365369 105 ntBASIC1.22□□□□□ -2.21
ATPAF1Q5TC12 RNU6-597P-201ENST00000365620 102 ntBASIC1.22□□□□□ -2.21
ATPAF1Q5TC12 MIR624-201ENST00000385217 97 ntBASIC1.22□□□□□ -2.21
ATPAF1Q5TC12 MIR1323-201ENST00000408090 73 ntBASIC1.22□□□□□ -2.21
ATPAF1Q5TC12 RNU7-90P-201ENST00000459216 62 ntBASIC1.22□□□□□ -2.21
ATPAF1Q5TC12 RNU6-182P-201ENST00000516970 105 ntBASIC1.22□□□□□ -2.21
ATPAF1Q5TC12 AC023827.1-201ENST00000569247 97 ntBASIC1.22□□□□□ -2.21
ATPAF1Q5TC12 AL645939.4-201ENST00000604495 135 ntBASIC1.22□□□□□ -2.21
ATPAF1Q5TC12 MIR8055-201ENST00000610739 97 ntBASIC1.22□□□□□ -2.21
ATPAF1Q5TC12 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
ATPAF1Q5TC12 RNU4-84P-201ENST00000364200 139 ntBASIC1.21□□□□□ -2.22
ATPAF1Q5TC12 RNU6-1082P-201ENST00000364574 107 ntBASIC1.21□□□□□ -2.22
ATPAF1Q5TC12 RNU6-239P-201ENST00000390990 99 ntBASIC1.21□□□□□ -2.22
ATPAF1Q5TC12 RNA5SP95-201ENST00000410319 137 ntBASIC1.21□□□□□ -2.22
ATPAF1Q5TC12 MRPL35P3-201ENST00000421557 364 ntBASIC1.21□□□□□ -2.22
ATPAF1Q5TC12 AL354695.1-201ENST00000427935 228 ntBASIC1.21□□□□□ -2.22
ATPAF1Q5TC12 HMGN1P33-201ENST00000432945 451 ntBASIC1.21□□□□□ -2.22
ATPAF1Q5TC12 MIR4303-201ENST00000581299 66 ntBASIC1.21□□□□□ -2.22
ATPAF1Q5TC12 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.21□□□□□ -2.22
ATPAF1Q5TC12 MIR19B1-201ENST00000384829 87 ntBASIC1.2□□□□□ -2.22
ATPAF1Q5TC12 SNORA17.3-201ENST00000391159 129 ntBASIC1.2□□□□□ -2.22
ATPAF1Q5TC12 RNU6-1190P-201ENST00000410811 104 ntBASIC1.2□□□□□ -2.22
ATPAF1Q5TC12 AC108059.2-201ENST00000434626 151 ntBASIC1.2□□□□□ -2.22
ATPAF1Q5TC12 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.2□□□□□ -2.22
ATPAF1Q5TC12 RNU7-45P-201ENST00000459460 63 ntBASIC1.2□□□□□ -2.22
ATPAF1Q5TC12 AC005840.1-201ENST00000498412 377 ntBASIC1.2□□□□□ -2.22
ATPAF1Q5TC12 MIR2115-201ENST00000516657 100 ntBASIC1.2□□□□□ -2.22
ATPAF1Q5TC12 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.2□□□□□ -2.22
ATPAF1Q5TC12 AL020996.3-201ENST00000606617 222 ntBASIC1.2□□□□□ -2.22
ATPAF1Q5TC12 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
ATPAF1Q5TC12 AL596211.1-201ENST00000569873 2277 ntBASIC1.19□□□□□ -2.22
ATPAF1Q5TC12 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
ATPAF1Q5TC12 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
ATPAF1Q5TC12 MIR302B-201ENST00000362188 73 ntBASIC1.19□□□□□ -2.22
ATPAF1Q5TC12 RNU1-124P-201ENST00000363861 145 ntBASIC1.19□□□□□ -2.22
ATPAF1Q5TC12 RNU6-125P-201ENST00000384505 107 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms