Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 RNU6-187P-201ENST00000384139 106 ntBASIC-0.21□□□□□ -2.44
ZNF404Q494X3 MIR593-201ENST00000384856 100 ntBASIC-0.21□□□□□ -2.44
ZNF404Q494X3 SNORD77.3-201ENST00000391113 65 ntBASIC-0.21□□□□□ -2.44
ZNF404Q494X3 MIR548H2-201ENST00000408874 88 ntBASIC-0.21□□□□□ -2.44
ZNF404Q494X3 RNU6-383P-201ENST00000410864 94 ntBASIC-0.21□□□□□ -2.44
ZNF404Q494X3 AL160004.2-201ENST00000432935 350 ntBASIC-0.21□□□□□ -2.44
ZNF404Q494X3 AL138752.1-201ENST00000452964 351 ntBASIC-0.21□□□□□ -2.44
ZNF404Q494X3 RNU2-11P-201ENST00000459191 187 ntBASIC-0.21□□□□□ -2.44
ZNF404Q494X3 RNU7-96P-201ENST00000459535 64 ntBASIC-0.21□□□□□ -2.44
ZNF404Q494X3 RNU6-693P-201ENST00000516134 107 ntBASIC-0.21□□□□□ -2.44
ZNF404Q494X3 SNORD116.3-201ENST00000517176 78 ntBASIC-0.21□□□□□ -2.44
ZNF404Q494X3 RNA5SP47-201ENST00000517230 109 ntBASIC-0.21□□□□□ -2.44
ZNF404Q494X3 MIR4305-201ENST00000583252 102 ntBASIC-0.21□□□□□ -2.44
ZNF404Q494X3 AC025253.1-201ENST00000613623 543 ntBASIC-0.21□□□□□ -2.44
ZNF404Q494X3 MIR1295B-201ENST00000636144 60 ntBASIC-0.21□□□□□ -2.44
ZNF404Q494X3 AC073869.6-201ENST00000640656 341 ntBASIC-0.21□□□□□ -2.44
ZNF404Q494X3 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.22□□□□□ -2.44
ZNF404Q494X3 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.22□□□□□ -2.44
ZNF404Q494X3 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.22□□□□□ -2.44
ZNF404Q494X3 SNORD81.2-201ENST00000365153 76 ntBASIC-0.22□□□□□ -2.44
ZNF404Q494X3 RNU6-302P-201ENST00000365249 107 ntBASIC-0.22□□□□□ -2.44
ZNF404Q494X3 RNA5SP128-201ENST00000365305 116 ntBASIC-0.22□□□□□ -2.44
ZNF404Q494X3 MTND1P14-201ENST00000427400 950 ntBASIC-0.22□□□□□ -2.44
ZNF404Q494X3 RNU6-191P-201ENST00000516295 94 ntBASIC-0.22□□□□□ -2.44
ZNF404Q494X3 RNU2-31P-201ENST00000516954 155 ntBASIC-0.22□□□□□ -2.44
ZNF404Q494X3 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.22□□□□□ -2.44
ZNF404Q494X3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.22□□□□□ -2.44
ZNF404Q494X3 AC113139.1-201ENST00000605049 239 ntBASIC-0.22□□□□□ -2.44
ZNF404Q494X3 AC091304.10-201ENST00000641554 121 ntBASIC-0.22□□□□□ -2.44
ZNF404Q494X3 MIR367-201ENST00000362299 68 ntBASIC-0.23□□□□□ -2.45
ZNF404Q494X3 RNU6-403P-201ENST00000363163 104 ntBASIC-0.23□□□□□ -2.45
ZNF404Q494X3 Y_RNA.318-201ENST00000365131 97 ntBASIC-0.23□□□□□ -2.45
ZNF404Q494X3 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.23□□□□□ -2.45
ZNF404Q494X3 SNORD116-4-201ENST00000384733 96 ntBASIC-0.23□□□□□ -2.45
ZNF404Q494X3 MIR548A2-201ENST00000384956 97 ntBASIC-0.23□□□□□ -2.45
ZNF404Q494X3 MIR892B-201ENST00000401279 77 ntBASIC-0.23□□□□□ -2.45
ZNF404Q494X3 SEPT14P8-201ENST00000508026 178 ntBASIC-0.23□□□□□ -2.45
ZNF404Q494X3 RNU6-998P-201ENST00000515894 101 ntBASIC-0.23□□□□□ -2.45
ZNF404Q494X3 SNORD77.4-201ENST00000516158 81 ntBASIC-0.23□□□□□ -2.45
ZNF404Q494X3 SNORA31.14-201ENST00000516728 116 ntBASIC-0.23□□□□□ -2.45
ZNF404Q494X3 SNORD113-5-201ENST00000607261 78 ntBASIC-0.23□□□□□ -2.45
ZNF404Q494X3 AP001282.2-201ENST00000616149 309 ntBASIC-0.23□□□□□ -2.45
ZNF404Q494X3 AL138825.1-201ENST00000618587 192 ntBASIC-0.23□□□□□ -2.45
ZNF404Q494X3 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.24□□□□□ -2.45
ZNF404Q494X3 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.24□□□□□ -2.45
ZNF404Q494X3 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.24□□□□□ -2.45
ZNF404Q494X3 SNORD24-201ENST00000383884 75 ntBASIC-0.24□□□□□ -2.45
ZNF404Q494X3 SNORA2A-201ENST00000383885 135 ntBASIC-0.24□□□□□ -2.45
ZNF404Q494X3 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.24□□□□□ -2.45
ZNF404Q494X3 SNORD28-201ENST00000384706 75 ntBASIC-0.24□□□□□ -2.45
ZNF404Q494X3 RNU6-763P-201ENST00000390865 106 ntBASIC-0.24□□□□□ -2.45
ZNF404Q494X3 RNA5SP237-201ENST00000410414 113 ntBASIC-0.24□□□□□ -2.45
ZNF404Q494X3 MTATP6P26-201ENST00000445926 662 ntBASIC-0.24□□□□□ -2.45
ZNF404Q494X3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.24□□□□□ -2.45
ZNF404Q494X3 RNU6-504P-201ENST00000516568 104 ntBASIC-0.24□□□□□ -2.45
ZNF404Q494X3 RNU6-782P-201ENST00000516852 104 ntBASIC-0.24□□□□□ -2.45
ZNF404Q494X3 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.24□□□□□ -2.45
ZNF404Q494X3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.24□□□□□ -2.45
ZNF404Q494X3 MIR6082-201ENST00000613604 109 ntBASIC-0.24□□□□□ -2.45
ZNF404Q494X3 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.25□□□□□ -2.45
ZNF404Q494X3 RNU6V-201ENST00000384105 107 ntBASIC-0.25□□□□□ -2.45
ZNF404Q494X3 SNORD61-201ENST00000384252 73 ntBASIC-0.25□□□□□ -2.45
ZNF404Q494X3 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.25□□□□□ -2.45
ZNF404Q494X3 SNORA26-201ENST00000391286 122 ntBASIC-0.25□□□□□ -2.45
ZNF404Q494X3 MTND1P34-201ENST00000438556 671 ntBASIC-0.25□□□□□ -2.45
ZNF404Q494X3 U8.20-201ENST00000459445 131 ntBASIC-0.25□□□□□ -2.45
ZNF404Q494X3 RNU6-765P-201ENST00000516916 99 ntBASIC-0.25□□□□□ -2.45
ZNF404Q494X3 MIR4639-201ENST00000584938 69 ntBASIC-0.25□□□□□ -2.45
ZNF404Q494X3 AL662814.1-201ENST00000617364 121 ntBASIC-0.25□□□□□ -2.45
ZNF404Q494X3 MTND4LP32-201ENST00000636111 270 ntBASIC-0.25□□□□□ -2.45
ZNF404Q494X3 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.25□□□□□ -2.45
ZNF404Q494X3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.25□□□□□ -2.45
ZNF404Q494X3 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.26□□□□□ -2.45
ZNF404Q494X3 RNU6-756P-201ENST00000383997 107 ntBASIC-0.26□□□□□ -2.45
ZNF404Q494X3 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.26□□□□□ -2.45
ZNF404Q494X3 RNU6-929P-201ENST00000384429 107 ntBASIC-0.26□□□□□ -2.45
ZNF404Q494X3 RNU6-269P-201ENST00000391077 97 ntBASIC-0.26□□□□□ -2.45
ZNF404Q494X3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.26□□□□□ -2.45
ZNF404Q494X3 AC104692.1-201ENST00000472406 90 ntBASIC-0.26□□□□□ -2.45
ZNF404Q494X3 RPL39P34-201ENST00000477141 156 ntBASIC-0.26□□□□□ -2.45
ZNF404Q494X3 RNU6-764P-201ENST00000516396 105 ntBASIC-0.26□□□□□ -2.45
ZNF404Q494X3 RNU6-126P-201ENST00000516685 103 ntBASIC-0.26□□□□□ -2.45
ZNF404Q494X3 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.26□□□□□ -2.45
ZNF404Q494X3 AC100767.1-201ENST00000528178 123 ntBASIC-0.26□□□□□ -2.45
ZNF404Q494X3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.26□□□□□ -2.45
ZNF404Q494X3 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.26□□□□□ -2.45
ZNF404Q494X3 MIR4724-201ENST00000579485 89 ntBASIC-0.26□□□□□ -2.45
ZNF404Q494X3 AC013791.1-201ENST00000616619 62 ntBASIC-0.26□□□□□ -2.45
ZNF404Q494X3 MIR6717-201ENST00000622747 73 ntBASIC-0.26□□□□□ -2.45
ZNF404Q494X3 MIR342-201ENST00000362212 99 ntBASIC-0.27□□□□□ -2.45
ZNF404Q494X3 RNU6-888P-201ENST00000363010 101 ntBASIC-0.27□□□□□ -2.45
ZNF404Q494X3 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.27□□□□□ -2.45
ZNF404Q494X3 MIR329-2-201ENST00000385029 84 ntBASIC-0.27□□□□□ -2.45
ZNF404Q494X3 RNY4P36-201ENST00000391116 96 ntBASIC-0.27□□□□□ -2.45
ZNF404Q494X3 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.27□□□□□ -2.45
ZNF404Q494X3 SNORA26.6-201ENST00000391256 115 ntBASIC-0.27□□□□□ -2.45
ZNF404Q494X3 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.27□□□□□ -2.45
ZNF404Q494X3 SNORA40.14-201ENST00000516543 86 ntBASIC-0.27□□□□□ -2.45
ZNF404Q494X3 RNU6-365P-201ENST00000517113 106 ntBASIC-0.27□□□□□ -2.45
ZNF404Q494X3 AC092447.9-201ENST00000603395 144 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 152 ms