Protein–RNA interactions for Protein: Q3V6T2

CCDC88A, Girdin, humanhuman

Predictions only

Length 1,871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88AQ3V6T2 CHEK2P4-201ENST00000450340 246 ntBASIC-0.55□□□□□ -2.5
CCDC88AQ3V6T2 RNU6-138P-201ENST00000515952 107 ntBASIC-0.55□□□□□ -2.5
CCDC88AQ3V6T2 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.55□□□□□ -2.5
CCDC88AQ3V6T2 RNU6-966P-201ENST00000516479 104 ntBASIC-0.55□□□□□ -2.5
CCDC88AQ3V6T2 RNU6-1016P-201ENST00000516689 94 ntBASIC-0.55□□□□□ -2.5
CCDC88AQ3V6T2 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.55□□□□□ -2.5
CCDC88AQ3V6T2 AP003072.1-201ENST00000531740 145 ntBASIC-0.55□□□□□ -2.5
CCDC88AQ3V6T2 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.55□□□□□ -2.5
CCDC88AQ3V6T2 DLEU2_2.2-201ENST00000615474 90 ntBASIC-0.55□□□□□ -2.5
CCDC88AQ3V6T2 AL596211.1-201ENST00000569873 2277 ntBASIC-0.55□□□□□ -2.5
CCDC88AQ3V6T2 RNU4-58P-201ENST00000363192 141 ntBASIC-0.56□□□□□ -2.5
CCDC88AQ3V6T2 RNU6-1090P-201ENST00000364065 94 ntBASIC-0.56□□□□□ -2.5
CCDC88AQ3V6T2 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.56□□□□□ -2.5
CCDC88AQ3V6T2 AC024067.1-201ENST00000426199 223 ntBASIC-0.56□□□□□ -2.5
CCDC88AQ3V6T2 AC098826.2-201ENST00000452011 651 ntBASIC-0.56□□□□□ -2.5
CCDC88AQ3V6T2 RPL7P42-201ENST00000481005 679 ntBASIC-0.56□□□□□ -2.5
CCDC88AQ3V6T2 RNU6-155P-201ENST00000516347 100 ntBASIC-0.56□□□□□ -2.5
CCDC88AQ3V6T2 MTND3P12-201ENST00000559068 328 ntBASIC-0.56□□□□□ -2.5
CCDC88AQ3V6T2 RNU4-80P-201ENST00000363200 141 ntBASIC-0.56□□□□□ -2.5
CCDC88AQ3V6T2 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.56□□□□□ -2.5
CCDC88AQ3V6T2 MIR548I3-201ENST00000408378 149 ntBASIC-0.56□□□□□ -2.5
CCDC88AQ3V6T2 Y_RNA.594-201ENST00000410373 140 ntBASIC-0.56□□□□□ -2.5
CCDC88AQ3V6T2 RNU6-1050P-201ENST00000410388 107 ntBASIC-0.56□□□□□ -2.5
CCDC88AQ3V6T2 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.56□□□□□ -2.5
CCDC88AQ3V6T2 RNU6-415P-201ENST00000516252 97 ntBASIC-0.56□□□□□ -2.5
CCDC88AQ3V6T2 AC138749.4-201ENST00000563970 127 ntBASIC-0.56□□□□□ -2.5
CCDC88AQ3V6T2 MIR1244-1-201ENST00000612829 85 ntBASIC-0.56□□□□□ -2.5
CCDC88AQ3V6T2 AC015540.1-201ENST00000615828 501 ntBASIC-0.56□□□□□ -2.5
CCDC88AQ3V6T2 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.56□□□□□ -2.5
CCDC88AQ3V6T2 MIR1244-3-201ENST00000635744 85 ntBASIC-0.56□□□□□ -2.5
CCDC88AQ3V6T2 MIR1244-2-201ENST00000636449 85 ntBASIC-0.56□□□□□ -2.5
CCDC88AQ3V6T2 MIR1244-4-202ENST00000636813 85 ntBASIC-0.56□□□□□ -2.5
CCDC88AQ3V6T2 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.57□□□□□ -2.5
CCDC88AQ3V6T2 MIR215-201ENST00000384858 110 ntBASIC-0.57□□□□□ -2.5
CCDC88AQ3V6T2 RNU6-780P-201ENST00000391030 104 ntBASIC-0.57□□□□□ -2.5
CCDC88AQ3V6T2 AC109327.2-201ENST00000448339 378 ntBASIC-0.57□□□□□ -2.5
CCDC88AQ3V6T2 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.57□□□□□ -2.5
CCDC88AQ3V6T2 AC073114.1-201ENST00000612027 490 ntBASIC-0.57□□□□□ -2.5
CCDC88AQ3V6T2 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.57□□□□□ -2.5
CCDC88AQ3V6T2 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.58□□□□□ -2.5
CCDC88AQ3V6T2 Y_RNA.222-201ENST00000364264 102 ntBASIC-0.58□□□□□ -2.5
CCDC88AQ3V6T2 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.58□□□□□ -2.5
CCDC88AQ3V6T2 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.58□□□□□ -2.5
CCDC88AQ3V6T2 MTND1P2-201ENST00000430604 821 ntBASIC-0.58□□□□□ -2.5
CCDC88AQ3V6T2 AL160004.2-201ENST00000432935 350 ntBASIC-0.58□□□□□ -2.5
CCDC88AQ3V6T2 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-0.58□□□□□ -2.5
CCDC88AQ3V6T2 RPS29P25-201ENST00000481709 171 ntBASIC-0.58□□□□□ -2.5
CCDC88AQ3V6T2 AC005357.1-201ENST00000588399 301 ntBASIC-0.58□□□□□ -2.5
CCDC88AQ3V6T2 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.58□□□□□ -2.5
CCDC88AQ3V6T2 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.58□□□□□ -2.5
CCDC88AQ3V6T2 AC013791.1-201ENST00000616619 62 ntBASIC-0.58□□□□□ -2.5
CCDC88AQ3V6T2 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.58□□□□□ -2.5
CCDC88AQ3V6T2 RNU4-32P-201ENST00000363404 141 ntBASIC-0.58□□□□□ -2.5
CCDC88AQ3V6T2 Y_RNA.473-201ENST00000384333 102 ntBASIC-0.58□□□□□ -2.5
CCDC88AQ3V6T2 MIR196A2-201ENST00000385189 110 ntBASIC-0.58□□□□□ -2.5
CCDC88AQ3V6T2 RNA5SP261-201ENST00000410536 106 ntBASIC-0.58□□□□□ -2.5
CCDC88AQ3V6T2 RNU2-55P-201ENST00000411146 174 ntBASIC-0.58□□□□□ -2.5
CCDC88AQ3V6T2 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.58□□□□□ -2.5
CCDC88AQ3V6T2 MIR5692C2-201ENST00000577959 77 ntBASIC-0.58□□□□□ -2.5
CCDC88AQ3V6T2 AL021707.8-201ENST00000609428 183 ntBASIC-0.58□□□□□ -2.5
CCDC88AQ3V6T2 TPTEP1-208ENST00000636884 213 ntBASIC-0.58□□□□□ -2.5
CCDC88AQ3V6T2 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-0.59□□□□□ -2.5
CCDC88AQ3V6T2 RN7SKP299-201ENST00000606679 301 ntBASIC-0.59□□□□□ -2.5
CCDC88AQ3V6T2 AP001282.2-201ENST00000616149 309 ntBASIC-0.59□□□□□ -2.5
CCDC88AQ3V6T2 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.6□□□□□ -2.51
CCDC88AQ3V6T2 RNU6-1059P-201ENST00000363752 98 ntBASIC-0.6□□□□□ -2.51
CCDC88AQ3V6T2 SNORA72.4-201ENST00000384174 132 ntBASIC-0.6□□□□□ -2.51
CCDC88AQ3V6T2 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.6□□□□□ -2.51
CCDC88AQ3V6T2 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.6□□□□□ -2.51
CCDC88AQ3V6T2 MTND3P10-201ENST00000450967 341 ntBASIC-0.6□□□□□ -2.51
CCDC88AQ3V6T2 RNU6-273P-201ENST00000516937 96 ntBASIC-0.6□□□□□ -2.51
CCDC88AQ3V6T2 AC109635.3-201ENST00000529536 185 ntBASIC-0.6□□□□□ -2.51
CCDC88AQ3V6T2 AC122108.2-201ENST00000611946 526 ntBASIC-0.6□□□□□ -2.51
CCDC88AQ3V6T2 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.61□□□□□ -2.51
CCDC88AQ3V6T2 RNU6-403P-201ENST00000363163 104 ntBASIC-0.61□□□□□ -2.51
CCDC88AQ3V6T2 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.61□□□□□ -2.51
CCDC88AQ3V6T2 RNU6-913P-201ENST00000390913 95 ntBASIC-0.61□□□□□ -2.51
CCDC88AQ3V6T2 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.61□□□□□ -2.51
CCDC88AQ3V6T2 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.61□□□□□ -2.51
CCDC88AQ3V6T2 PISRT1.1-201ENST00000616930 107 ntBASIC-0.61□□□□□ -2.51
CCDC88AQ3V6T2 AC078883.4-201ENST00000623218 367 ntBASIC-0.61□□□□□ -2.51
CCDC88AQ3V6T2 MIR3974-201ENST00000637126 96 ntBASIC-0.61□□□□□ -2.51
CCDC88AQ3V6T2 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.61□□□□□ -2.51
CCDC88AQ3V6T2 RNU4-70P-201ENST00000384579 139 ntBASIC-0.61□□□□□ -2.51
CCDC88AQ3V6T2 RNU6-504P-201ENST00000516568 104 ntBASIC-0.61□□□□□ -2.51
CCDC88AQ3V6T2 Y_RNA.708-201ENST00000516950 96 ntBASIC-0.61□□□□□ -2.51
CCDC88AQ3V6T2 RNU6-897P-201ENST00000517135 105 ntBASIC-0.61□□□□□ -2.51
CCDC88AQ3V6T2 RNU6-1314P-201ENST00000517139 104 ntBASIC-0.61□□□□□ -2.51
CCDC88AQ3V6T2 MIR3908-201ENST00000579798 126 ntBASIC-0.61□□□□□ -2.51
CCDC88AQ3V6T2 MIR5688-201ENST00000580619 83 ntBASIC-0.61□□□□□ -2.51
CCDC88AQ3V6T2 RNU6-1188P-201ENST00000363795 107 ntBASIC-0.62□□□□□ -2.51
CCDC88AQ3V6T2 RNU6-306P-201ENST00000384617 107 ntBASIC-0.62□□□□□ -2.51
CCDC88AQ3V6T2 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
CCDC88AQ3V6T2 U8.15-201ENST00000390947 134 ntBASIC-0.62□□□□□ -2.51
CCDC88AQ3V6T2 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.62□□□□□ -2.51
CCDC88AQ3V6T2 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.62□□□□□ -2.51
CCDC88AQ3V6T2 RPS3AP52-201ENST00000435639 297 ntBASIC-0.62□□□□□ -2.51
CCDC88AQ3V6T2 MTATP6P23-201ENST00000440153 476 ntBASIC-0.62□□□□□ -2.51
CCDC88AQ3V6T2 RNU6-506P-201ENST00000516553 94 ntBASIC-0.62□□□□□ -2.51
CCDC88AQ3V6T2 RNU6-365P-201ENST00000517113 106 ntBASIC-0.62□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms