Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-1.82□□□□□ -2.7
CPSF1Q10570 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.82□□□□□ -2.7
CPSF1Q10570 RNU7-96P-201ENST00000459535 64 ntBASIC-1.82□□□□□ -2.7
CPSF1Q10570 RNU6-1038P-201ENST00000516516 104 ntBASIC-1.82□□□□□ -2.7
CPSF1Q10570 YWHAEP2-201ENST00000580066 112 ntBASIC-1.82□□□□□ -2.7
CPSF1Q10570 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-1.83□□□□□ -2.7
CPSF1Q10570 AC073415.1-201ENST00000449240 153 ntBASIC-1.83□□□□□ -2.7
CPSF1Q10570 RNU6-479P-201ENST00000516348 105 ntBASIC-1.83□□□□□ -2.7
CPSF1Q10570 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.83□□□□□ -2.7
CPSF1Q10570 Y_RNA.497-201ENST00000384447 98 ntBASIC-1.83□□□□□ -2.7
CPSF1Q10570 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.83□□□□□ -2.7
CPSF1Q10570 snoU13.13-201ENST00000458842 104 ntBASIC-1.83□□□□□ -2.7
CPSF1Q10570 RNU6-998P-201ENST00000515894 101 ntBASIC-1.83□□□□□ -2.7
CPSF1Q10570 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.83□□□□□ -2.7
CPSF1Q10570 MIR548H5-201ENST00000580314 60 ntBASIC-1.83□□□□□ -2.7
CPSF1Q10570 MIR3920-201ENST00000581751 86 ntBASIC-1.83□□□□□ -2.7
CPSF1Q10570 AC087752.4-201ENST00000605911 462 ntBASIC-1.83□□□□□ -2.7
CPSF1Q10570 MIR20A-201ENST00000362279 71 ntBASIC-1.84□□□□□ -2.7
CPSF1Q10570 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.84□□□□□ -2.7
CPSF1Q10570 RNU6-154P-201ENST00000384306 106 ntBASIC-1.84□□□□□ -2.7
CPSF1Q10570 DLEU2_5.1-201ENST00000615567 84 ntBASIC-1.84□□□□□ -2.7
CPSF1Q10570 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-1.84□□□□□ -2.7
CPSF1Q10570 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.85□□□□□ -2.71
CPSF1Q10570 RNU6-595P-201ENST00000363944 107 ntBASIC-1.85□□□□□ -2.71
CPSF1Q10570 RNY1P13-201ENST00000365030 105 ntBASIC-1.85□□□□□ -2.71
CPSF1Q10570 Y_RNA.358-201ENST00000365491 99 ntBASIC-1.85□□□□□ -2.71
CPSF1Q10570 Y_RNA.378-201ENST00000365652 113 ntBASIC-1.85□□□□□ -2.71
CPSF1Q10570 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.85□□□□□ -2.71
CPSF1Q10570 AC084290.1-201ENST00000434995 374 ntBASIC-1.85□□□□□ -2.71
CPSF1Q10570 RNU7-63P-201ENST00000459054 62 ntBASIC-1.85□□□□□ -2.71
CPSF1Q10570 RNU6-436P-201ENST00000516171 114 ntBASIC-1.85□□□□□ -2.71
CPSF1Q10570 AP000240.1-201ENST00000609910 452 ntBASIC-1.85□□□□□ -2.71
CPSF1Q10570 AP001506.1-201ENST00000615444 211 ntBASIC-1.85□□□□□ -2.71
CPSF1Q10570 RNA5SP133-201ENST00000363368 119 ntBASIC-1.86□□□□□ -2.71
CPSF1Q10570 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.86□□□□□ -2.71
CPSF1Q10570 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.86□□□□□ -2.71
CPSF1Q10570 MIR1278-201ENST00000408753 81 ntBASIC-1.86□□□□□ -2.71
CPSF1Q10570 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.86□□□□□ -2.71
CPSF1Q10570 MTATP6P13-201ENST00000438531 667 ntBASIC-1.86□□□□□ -2.71
CPSF1Q10570 SNORD11-201ENST00000459124 84 ntBASIC-1.86□□□□□ -2.71
CPSF1Q10570 AC127455.1-201ENST00000565496 145 ntBASIC-1.86□□□□□ -2.71
CPSF1Q10570 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.87□□□□□ -2.71
CPSF1Q10570 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.87□□□□□ -2.71
CPSF1Q10570 RNU6-449P-201ENST00000383914 107 ntBASIC-1.87□□□□□ -2.71
CPSF1Q10570 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.87□□□□□ -2.71
CPSF1Q10570 Y_RNA.533-201ENST00000384596 114 ntBASIC-1.87□□□□□ -2.71
CPSF1Q10570 RNY4P36-201ENST00000391116 96 ntBASIC-1.87□□□□□ -2.71
CPSF1Q10570 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.87□□□□□ -2.71
CPSF1Q10570 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.87□□□□□ -2.71
CPSF1Q10570 AC011603.4-201ENST00000611325 277 ntBASIC-1.87□□□□□ -2.71
CPSF1Q10570 RNU4-50P-201ENST00000364361 141 ntBASIC-1.88□□□□□ -2.71
CPSF1Q10570 RNU6-128P-201ENST00000383976 107 ntBASIC-1.88□□□□□ -2.71
CPSF1Q10570 MIR517A-201ENST00000385001 87 ntBASIC-1.88□□□□□ -2.71
CPSF1Q10570 RNU6-1000P-201ENST00000391066 106 ntBASIC-1.88□□□□□ -2.71
CPSF1Q10570 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.88□□□□□ -2.71
CPSF1Q10570 RNU6-710P-201ENST00000410424 105 ntBASIC-1.88□□□□□ -2.71
CPSF1Q10570 BX295541.1-201ENST00000417774 250 ntBASIC-1.88□□□□□ -2.71
CPSF1Q10570 AL033528.1-201ENST00000453780 140 ntBASIC-1.88□□□□□ -2.71
CPSF1Q10570 RNU6-408P-201ENST00000515910 100 ntBASIC-1.88□□□□□ -2.71
CPSF1Q10570 RNU7-115P-201ENST00000516433 55 ntBASIC-1.88□□□□□ -2.71
CPSF1Q10570 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.88□□□□□ -2.71
CPSF1Q10570 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.88□□□□□ -2.71
CPSF1Q10570 AL118558.2-201ENST00000556294 238 ntBASIC-1.88□□□□□ -2.71
CPSF1Q10570 MIR4520-1-201ENST00000582609 70 ntBASIC-1.88□□□□□ -2.71
CPSF1Q10570 MIR4273-201ENST00000582824 84 ntBASIC-1.88□□□□□ -2.71
CPSF1Q10570 RNU7-10P-201ENST00000607194 63 ntBASIC-1.88□□□□□ -2.71
CPSF1Q10570 AC007494.3-201ENST00000624660 743 ntBASIC-1.88□□□□□ -2.71
CPSF1Q10570 MIR302B-201ENST00000362188 73 ntBASIC-1.89□□□□□ -2.71
CPSF1Q10570 Y_RNA.341-201ENST00000365341 102 ntBASIC-1.89□□□□□ -2.71
CPSF1Q10570 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.89□□□□□ -2.71
CPSF1Q10570 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.89□□□□□ -2.71
CPSF1Q10570 MTND3P7-201ENST00000474435 343 ntBASIC-1.89□□□□□ -2.71
CPSF1Q10570 MIR548AE1-201ENST00000583292 70 ntBASIC-1.89□□□□□ -2.71
CPSF1Q10570 AC019193.3-201ENST00000609144 554 ntBASIC-1.89□□□□□ -2.71
CPSF1Q10570 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.9□□□□□ -2.71
CPSF1Q10570 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.9□□□□□ -2.71
CPSF1Q10570 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.9□□□□□ -2.71
CPSF1Q10570 SNORD116-9-201ENST00000384000 95 ntBASIC-1.9□□□□□ -2.71
CPSF1Q10570 SNORD116-3-201ENST00000384287 95 ntBASIC-1.9□□□□□ -2.71
CPSF1Q10570 SNORD116-8-201ENST00000384365 95 ntBASIC-1.9□□□□□ -2.71
CPSF1Q10570 SNORD116-7-201ENST00000384404 95 ntBASIC-1.9□□□□□ -2.71
CPSF1Q10570 SNORD116-5-201ENST00000384462 95 ntBASIC-1.9□□□□□ -2.71
CPSF1Q10570 MIR599-201ENST00000385069 95 ntBASIC-1.9□□□□□ -2.71
CPSF1Q10570 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-1.9□□□□□ -2.71
CPSF1Q10570 SNORA40.17-201ENST00000517256 115 ntBASIC-1.9□□□□□ -2.71
CPSF1Q10570 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.9□□□□□ -2.71
CPSF1Q10570 AC018638.8-201ENST00000588755 281 ntBASIC-1.9□□□□□ -2.71
CPSF1Q10570 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.91□□□□□ -2.71
CPSF1Q10570 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.91□□□□□ -2.71
CPSF1Q10570 AC016907.1-201ENST00000419483 435 ntBASIC-1.91□□□□□ -2.71
CPSF1Q10570 RNU7-45P-201ENST00000459460 63 ntBASIC-1.91□□□□□ -2.71
CPSF1Q10570 SNORD36C-201ENST00000516733 66 ntBASIC-1.91□□□□□ -2.71
CPSF1Q10570 AC122108.2-201ENST00000611946 526 ntBASIC-1.91□□□□□ -2.71
CPSF1Q10570 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.91□□□□□ -2.71
CPSF1Q10570 RNU6-318P-201ENST00000384283 103 ntBASIC-1.91□□□□□ -2.72
CPSF1Q10570 RNU6-540P-201ENST00000384622 101 ntBASIC-1.91□□□□□ -2.72
CPSF1Q10570 MIR190B-201ENST00000401119 79 ntBASIC-1.91□□□□□ -2.72
CPSF1Q10570 MIR889-201ENST00000401280 79 ntBASIC-1.91□□□□□ -2.72
CPSF1Q10570 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.91□□□□□ -2.72
CPSF1Q10570 RNU7-13P-201ENST00000516413 62 ntBASIC-1.91□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 150.9 ms