Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 MIR6740-201ENST00000618268 113 ntBASIC0.53□□□□□ -2.32
SCN1BQ07699 SNORD38B-202ENST00000625943 69 ntBASIC0.53□□□□□ -2.32
SCN1BQ07699 AC010332.2-201ENST00000613083 1904 ntBASIC0.53□□□□□ -2.32
SCN1BQ07699 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.52□□□□□ -2.33
SCN1BQ07699 UBE2WP1-201ENST00000362030 340 ntBASIC0.52□□□□□ -2.33
SCN1BQ07699 Y_RNA.153-201ENST00000363615 91 ntBASIC0.52□□□□□ -2.33
SCN1BQ07699 SNORA63C-201ENST00000364578 129 ntBASIC0.52□□□□□ -2.33
SCN1BQ07699 RNU1-93P-201ENST00000364704 169 ntBASIC0.52□□□□□ -2.33
SCN1BQ07699 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.52□□□□□ -2.33
SCN1BQ07699 RNU6-126P-201ENST00000516685 103 ntBASIC0.52□□□□□ -2.33
SCN1BQ07699 AC004812.1-201ENST00000540773 146 ntBASIC0.52□□□□□ -2.33
SCN1BQ07699 AC020891.4-201ENST00000605745 93 ntBASIC0.52□□□□□ -2.33
SCN1BQ07699 Z97988.1-201ENST00000637697 135 ntBASIC0.52□□□□□ -2.33
SCN1BQ07699 RNU6-888P-201ENST00000363010 101 ntBASIC0.51□□□□□ -2.33
SCN1BQ07699 Y_RNA.116-201ENST00000363292 103 ntBASIC0.51□□□□□ -2.33
SCN1BQ07699 RNU6-1289P-201ENST00000384431 106 ntBASIC0.51□□□□□ -2.33
SCN1BQ07699 AL138752.1-201ENST00000452964 351 ntBASIC0.51□□□□□ -2.33
SCN1BQ07699 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.51□□□□□ -2.33
SCN1BQ07699 snoU13.18-201ENST00000459483 104 ntBASIC0.51□□□□□ -2.33
SCN1BQ07699 RNU6-1338P-201ENST00000516328 91 ntBASIC0.51□□□□□ -2.33
SCN1BQ07699 AC020661.2-201ENST00000560114 134 ntBASIC0.51□□□□□ -2.33
SCN1BQ07699 CYP3A137P-201ENST00000562436 69 ntBASIC0.51□□□□□ -2.33
SCN1BQ07699 MIR3612-201ENST00000579753 87 ntBASIC0.51□□□□□ -2.33
SCN1BQ07699 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
SCN1BQ07699 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
SCN1BQ07699 SNORA1.1-201ENST00000364671 133 ntBASIC0.5□□□□□ -2.33
SCN1BQ07699 RNU6-504P-201ENST00000516568 104 ntBASIC0.5□□□□□ -2.33
SCN1BQ07699 RNU6-570P-201ENST00000517051 105 ntBASIC0.5□□□□□ -2.33
SCN1BQ07699 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.5□□□□□ -2.33
SCN1BQ07699 MIR5688-201ENST00000580619 83 ntBASIC0.5□□□□□ -2.33
SCN1BQ07699 MIR6788-201ENST00000618842 66 ntBASIC0.5□□□□□ -2.33
SCN1BQ07699 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
SCN1BQ07699 MIR18A-201ENST00000362310 71 ntBASIC0.49□□□□□ -2.33
SCN1BQ07699 Y_RNA.117-201ENST00000363294 101 ntBASIC0.49□□□□□ -2.33
SCN1BQ07699 Y_RNA.275-201ENST00000364726 110 ntBASIC0.49□□□□□ -2.33
SCN1BQ07699 Y_RNA.508-201ENST00000384502 114 ntBASIC0.49□□□□□ -2.33
SCN1BQ07699 MIR588-201ENST00000384900 83 ntBASIC0.49□□□□□ -2.33
SCN1BQ07699 RNU6-1190P-201ENST00000410811 104 ntBASIC0.49□□□□□ -2.33
SCN1BQ07699 AC113618.1-201ENST00000416747 285 ntBASIC0.49□□□□□ -2.33
SCN1BQ07699 AL157398.1-201ENST00000452981 186 ntBASIC0.49□□□□□ -2.33
SCN1BQ07699 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.49□□□□□ -2.33
SCN1BQ07699 RNU6-1137P-201ENST00000517073 99 ntBASIC0.49□□□□□ -2.33
SCN1BQ07699 RNU6-1223P-201ENST00000517124 104 ntBASIC0.49□□□□□ -2.33
SCN1BQ07699 MIR8055-201ENST00000610739 97 ntBASIC0.49□□□□□ -2.33
SCN1BQ07699 Y_RNA.91-201ENST00000363042 107 ntBASIC0.48□□□□□ -2.33
SCN1BQ07699 RNU6-1309P-201ENST00000363305 108 ntBASIC0.48□□□□□ -2.33
SCN1BQ07699 SNORD18A-201ENST00000363753 72 ntBASIC0.48□□□□□ -2.33
SCN1BQ07699 MIR626-201ENST00000385032 94 ntBASIC0.48□□□□□ -2.33
SCN1BQ07699 MIR548J-201ENST00000408833 112 ntBASIC0.48□□□□□ -2.33
SCN1BQ07699 RNU6-1165P-201ENST00000410119 107 ntBASIC0.48□□□□□ -2.33
SCN1BQ07699 RNU6-1203P-201ENST00000410703 110 ntBASIC0.48□□□□□ -2.33
SCN1BQ07699 RNU2-70P-201ENST00000410718 179 ntBASIC0.48□□□□□ -2.33
SCN1BQ07699 RN7SKP12-201ENST00000516275 143 ntBASIC0.48□□□□□ -2.33
SCN1BQ07699 RNU6-1299P-201ENST00000516316 100 ntBASIC0.48□□□□□ -2.33
SCN1BQ07699 AL162730.1-201ENST00000605734 292 ntBASIC0.48□□□□□ -2.33
SCN1BQ07699 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.48□□□□□ -2.33
SCN1BQ07699 MIR5087-201ENST00000635826 76 ntBASIC0.48□□□□□ -2.33
SCN1BQ07699 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
SCN1BQ07699 Y_RNA.7-201ENST00000362352 102 ntBASIC0.47□□□□□ -2.33
SCN1BQ07699 Y_RNA.66-201ENST00000362862 102 ntBASIC0.47□□□□□ -2.33
SCN1BQ07699 Y_RNA.202-201ENST00000364083 110 ntBASIC0.47□□□□□ -2.33
SCN1BQ07699 MIR938-201ENST00000401216 83 ntBASIC0.47□□□□□ -2.33
SCN1BQ07699 MIR548I3-201ENST00000408378 149 ntBASIC0.47□□□□□ -2.33
SCN1BQ07699 RNU6-602P-201ENST00000411155 105 ntBASIC0.47□□□□□ -2.33
SCN1BQ07699 AF228730.3-201ENST00000436691 102 ntBASIC0.47□□□□□ -2.33
SCN1BQ07699 RNU7-56P-201ENST00000458744 62 ntBASIC0.47□□□□□ -2.33
SCN1BQ07699 RNU2-11P-201ENST00000459191 187 ntBASIC0.47□□□□□ -2.33
SCN1BQ07699 RNU7-96P-201ENST00000459535 64 ntBASIC0.47□□□□□ -2.33
SCN1BQ07699 SNORA68.3-201ENST00000515906 83 ntBASIC0.47□□□□□ -2.33
SCN1BQ07699 RNU4-45P-201ENST00000365469 141 ntBASIC0.46□□□□□ -2.34
SCN1BQ07699 RNU6-484P-201ENST00000384016 107 ntBASIC0.46□□□□□ -2.34
SCN1BQ07699 SNORA26-201ENST00000391286 122 ntBASIC0.46□□□□□ -2.34
SCN1BQ07699 MIR18B-201ENST00000454574 71 ntBASIC0.46□□□□□ -2.34
SCN1BQ07699 RNU6-998P-201ENST00000515894 101 ntBASIC0.46□□□□□ -2.34
SCN1BQ07699 Y_RNA.673-201ENST00000516306 88 ntBASIC0.46□□□□□ -2.34
SCN1BQ07699 AL356055.1-201ENST00000602528 446 ntBASIC0.46□□□□□ -2.34
SCN1BQ07699 MIR6515-201ENST00000619843 57 ntBASIC0.46□□□□□ -2.34
SCN1BQ07699 MIR342-201ENST00000362212 99 ntBASIC0.45□□□□□ -2.34
SCN1BQ07699 Y_RNA.44-201ENST00000362676 108 ntBASIC0.45□□□□□ -2.34
SCN1BQ07699 Y_RNA.634-201ENST00000364811 113 ntBASIC0.45□□□□□ -2.34
SCN1BQ07699 RNU6-1189P-201ENST00000383958 107 ntBASIC0.45□□□□□ -2.34
SCN1BQ07699 Y_RNA.432-201ENST00000384087 111 ntBASIC0.45□□□□□ -2.34
SCN1BQ07699 MT-TT-201ENST00000387460 66 ntBASIC0.45□□□□□ -2.34
SCN1BQ07699 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
SCN1BQ07699 SNORD77.3-201ENST00000391113 65 ntBASIC0.45□□□□□ -2.34
SCN1BQ07699 MIR1257-201ENST00000408490 117 ntBASIC0.45□□□□□ -2.34
SCN1BQ07699 Y_RNA.622-201ENST00000411091 108 ntBASIC0.45□□□□□ -2.34
SCN1BQ07699 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.45□□□□□ -2.34
SCN1BQ07699 snoU13.2-201ENST00000459201 104 ntBASIC0.45□□□□□ -2.34
SCN1BQ07699 MIR5000-201ENST00000577717 103 ntBASIC0.45□□□□□ -2.34
SCN1BQ07699 MIR4714-201ENST00000580728 77 ntBASIC0.45□□□□□ -2.34
SCN1BQ07699 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
SCN1BQ07699 RNU6-364P-201ENST00000384387 107 ntBASIC0.44□□□□□ -2.34
SCN1BQ07699 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.44□□□□□ -2.34
SCN1BQ07699 RNU7-185P-201ENST00000459215 60 ntBASIC0.44□□□□□ -2.34
SCN1BQ07699 RNU6-229P-201ENST00000516614 102 ntBASIC0.44□□□□□ -2.34
SCN1BQ07699 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.44□□□□□ -2.34
SCN1BQ07699 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.44□□□□□ -2.34
SCN1BQ07699 RNU6-740P-201ENST00000364734 105 ntBASIC0.43□□□□□ -2.34
SCN1BQ07699 Y_RNA.440-201ENST00000384120 114 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 183.8 ms