Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 SNORD36C-201ENST00000516733 66 ntBASIC1.61□□□□□ -2.15
LTBQ06643 AC022254.1-201ENST00000567857 235 ntBASIC1.61□□□□□ -2.15
LTBQ06643 MIR3122-201ENST00000577243 73 ntBASIC1.61□□□□□ -2.15
LTBQ06643 MIR4303-201ENST00000581299 66 ntBASIC1.61□□□□□ -2.15
LTBQ06643 MIR4452-201ENST00000583004 71 ntBASIC1.61□□□□□ -2.15
LTBQ06643 AL022345.2-201ENST00000606307 135 ntBASIC1.61□□□□□ -2.15
LTBQ06643 AL512598.1-201ENST00000610158 273 ntBASIC1.61□□□□□ -2.15
LTBQ06643 RMST_2.1-201ENST00000617263 136 ntBASIC1.61□□□□□ -2.15
LTBQ06643 MIR6779-201ENST00000617283 64 ntBASIC1.61□□□□□ -2.15
LTBQ06643 AC084768.2-201ENST00000622736 221 ntBASIC1.61□□□□□ -2.15
LTBQ06643 AC027279.3-201ENST00000625055 122 ntBASIC1.61□□□□□ -2.15
LTBQ06643 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
LTBQ06643 Y_RNA.37-201ENST00000362606 108 ntBASIC1.6□□□□□ -2.15
LTBQ06643 SNORD114-26-201ENST00000363543 72 ntBASIC1.6□□□□□ -2.15
LTBQ06643 SNORD115-28-201ENST00000363931 81 ntBASIC1.6□□□□□ -2.15
LTBQ06643 AC093850.1-201ENST00000454121 251 ntBASIC1.6□□□□□ -2.15
LTBQ06643 AC099513.1-201ENST00000490423 301 ntBASIC1.6□□□□□ -2.15
LTBQ06643 CYCTP-201ENST00000504253 315 ntBASIC1.6□□□□□ -2.15
LTBQ06643 AL359881.1-201ENST00000602916 267 ntBASIC1.6□□□□□ -2.15
LTBQ06643 MIR8081-201ENST00000611533 95 ntBASIC1.6□□□□□ -2.15
LTBQ06643 AC021506.2-201ENST00000612354 169 ntBASIC1.6□□□□□ -2.15
LTBQ06643 AC134878.1-201ENST00000619901 243 ntBASIC1.6□□□□□ -2.15
LTBQ06643 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.6□□□□□ -2.15
LTBQ06643 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.6□□□□□ -2.15
LTBQ06643 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
LTBQ06643 RNU6-1189P-201ENST00000383958 107 ntBASIC1.59□□□□□ -2.15
LTBQ06643 RNU6-950P-201ENST00000384651 107 ntBASIC1.59□□□□□ -2.15
LTBQ06643 MIR676-201ENST00000390702 67 ntBASIC1.59□□□□□ -2.15
LTBQ06643 RPL23AP6-201ENST00000446637 472 ntBASIC1.59□□□□□ -2.15
LTBQ06643 RNU7-95P-201ENST00000459222 64 ntBASIC1.59□□□□□ -2.15
LTBQ06643 RNU7-34P-201ENST00000459394 64 ntBASIC1.59□□□□□ -2.15
LTBQ06643 RNU7-12P-201ENST00000516030 62 ntBASIC1.59□□□□□ -2.15
LTBQ06643 Y_RNA.712-201ENST00000517011 92 ntBASIC1.59□□□□□ -2.15
LTBQ06643 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.59□□□□□ -2.15
LTBQ06643 AC090049.2-201ENST00000550377 109 ntBASIC1.59□□□□□ -2.15
LTBQ06643 MIR5197-201ENST00000583721 112 ntBASIC1.59□□□□□ -2.15
LTBQ06643 AC108081.1-201ENST00000604358 221 ntBASIC1.59□□□□□ -2.15
LTBQ06643 AC015726.2-201ENST00000620112 122 ntBASIC1.59□□□□□ -2.15
LTBQ06643 RNU6-833P-201ENST00000363486 107 ntBASIC1.58□□□□□ -2.16
LTBQ06643 Y_RNA.410-201ENST00000383992 113 ntBASIC1.58□□□□□ -2.16
LTBQ06643 SNORD20-201ENST00000384550 80 ntBASIC1.58□□□□□ -2.16
LTBQ06643 Y_RNA.630-201ENST00000411370 108 ntBASIC1.58□□□□□ -2.16
LTBQ06643 AC004965.1-201ENST00000413033 213 ntBASIC1.58□□□□□ -2.16
LTBQ06643 AC015922.2-201ENST00000435593 184 ntBASIC1.58□□□□□ -2.16
LTBQ06643 HMGN2P32-201ENST00000444648 269 ntBASIC1.58□□□□□ -2.16
LTBQ06643 snoU13.27-201ENST00000459278 104 ntBASIC1.58□□□□□ -2.16
LTBQ06643 SNORA31.17-201ENST00000516953 127 ntBASIC1.58□□□□□ -2.16
LTBQ06643 MIR4709-201ENST00000577272 72 ntBASIC1.58□□□□□ -2.16
LTBQ06643 AL442644.1-201ENST00000454390 3105 ntBASIC1.58□□□□□ -2.16
LTBQ06643 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
LTBQ06643 RNU6-392P-201ENST00000364926 101 ntBASIC1.57□□□□□ -2.16
LTBQ06643 SNORA2.2-201ENST00000365473 135 ntBASIC1.57□□□□□ -2.16
LTBQ06643 Y_RNA.494-201ENST00000384432 111 ntBASIC1.57□□□□□ -2.16
LTBQ06643 Y_RNA.563-201ENST00000384707 108 ntBASIC1.57□□□□□ -2.16
LTBQ06643 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
LTBQ06643 SNORA40.5-201ENST00000391061 128 ntBASIC1.57□□□□□ -2.16
LTBQ06643 Y_RNA.617-201ENST00000410920 90 ntBASIC1.57□□□□□ -2.16
LTBQ06643 Y_RNA.629-201ENST00000411368 105 ntBASIC1.57□□□□□ -2.16
LTBQ06643 RNU6-772P-201ENST00000516042 105 ntBASIC1.57□□□□□ -2.16
LTBQ06643 RNU6-781P-201ENST00000516377 101 ntBASIC1.57□□□□□ -2.16
LTBQ06643 MIR3618-201ENST00000580330 88 ntBASIC1.57□□□□□ -2.16
LTBQ06643 MIR4713-201ENST00000582691 75 ntBASIC1.57□□□□□ -2.16
LTBQ06643 Y_RNA.353-201ENST00000365440 108 ntBASIC1.56□□□□□ -2.16
LTBQ06643 Y_RNA.440-201ENST00000384120 114 ntBASIC1.56□□□□□ -2.16
LTBQ06643 SNORD38C-201ENST00000384381 69 ntBASIC1.56□□□□□ -2.16
LTBQ06643 MIR516B2-201ENST00000385190 85 ntBASIC1.56□□□□□ -2.16
LTBQ06643 MTATP6P21-201ENST00000440681 189 ntBASIC1.56□□□□□ -2.16
LTBQ06643 RN7SKP179-201ENST00000516126 217 ntBASIC1.56□□□□□ -2.16
LTBQ06643 RNU6-830P-201ENST00000516353 107 ntBASIC1.56□□□□□ -2.16
LTBQ06643 RNU6-1061P-201ENST00000516530 99 ntBASIC1.56□□□□□ -2.16
LTBQ06643 RNA5SP481-201ENST00000516814 122 ntBASIC1.56□□□□□ -2.16
LTBQ06643 IGKV1-22-201ENST00000524313 326 ntBASIC1.56□□□□□ -2.16
LTBQ06643 AP003484.1-201ENST00000530974 250 ntBASIC1.56□□□□□ -2.16
LTBQ06643 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.56□□□□□ -2.16
LTBQ06643 MIR4778-201ENST00000577635 80 ntBASIC1.56□□□□□ -2.16
LTBQ06643 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.55□□□□□ -2.16
LTBQ06643 Y_RNA.273-201ENST00000364703 102 ntBASIC1.55□□□□□ -2.16
LTBQ06643 PGBD4P5-201ENST00000445958 426 ntBASIC1.55□□□□□ -2.16
LTBQ06643 RN7SKP19-201ENST00000516016 252 ntBASIC1.55□□□□□ -2.16
LTBQ06643 RNU6-250P-201ENST00000516958 103 ntBASIC1.55□□□□□ -2.16
LTBQ06643 AC133485.4-201ENST00000561835 220 ntBASIC1.55□□□□□ -2.16
LTBQ06643 AC138907.4-201ENST00000570107 226 ntBASIC1.55□□□□□ -2.16
LTBQ06643 MIR3914-2-201ENST00000637339 95 ntBASIC1.55□□□□□ -2.16
LTBQ06643 RNU6-647P-201ENST00000364243 107 ntBASIC1.54□□□□□ -2.16
LTBQ06643 RNU6-215P-201ENST00000365169 102 ntBASIC1.54□□□□□ -2.16
LTBQ06643 SNORD58C-201ENST00000365223 64 ntBASIC1.54□□□□□ -2.16
LTBQ06643 RNU6-203P-201ENST00000384038 104 ntBASIC1.54□□□□□ -2.16
LTBQ06643 MIR526A1-201ENST00000384897 85 ntBASIC1.54□□□□□ -2.16
LTBQ06643 MIR660-201ENST00000385235 97 ntBASIC1.54□□□□□ -2.16
LTBQ06643 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.54□□□□□ -2.16
LTBQ06643 AC087499.4-201ENST00000448505 178 ntBASIC1.54□□□□□ -2.16
LTBQ06643 AC009474.2-201ENST00000451383 136 ntBASIC1.54□□□□□ -2.16
LTBQ06643 RNU7-181P-201ENST00000517234 74 ntBASIC1.54□□□□□ -2.16
LTBQ06643 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.54□□□□□ -2.16
LTBQ06643 AL513423.1-201ENST00000621695 132 ntBASIC1.54□□□□□ -2.16
LTBQ06643 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
LTBQ06643 MIR424-201ENST00000362227 98 ntBASIC1.53□□□□□ -2.16
LTBQ06643 Y_RNA.351-201ENST00000365436 96 ntBASIC1.53□□□□□ -2.16
LTBQ06643 RNU6-429P-201ENST00000384582 108 ntBASIC1.53□□□□□ -2.16
LTBQ06643 RNU6-360P-201ENST00000390944 104 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 221.7 ms