Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 AL500527.2-201ENST00000454105 95 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 RPL7P42-201ENST00000481005 679 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 AC091951.2-201ENST00000500762 203 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-0.22□□□□□ -2.45
COL7A1Q02388 AC097510.1-201ENST00000510945 133 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 RNU6-118P-201ENST00000516552 102 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 Y_RNA.704-201ENST00000516851 102 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 RNU6-430P-201ENST00000517078 107 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 MIR5696-201ENST00000578474 85 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 MIR4770-201ENST00000579149 58 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 MIR4473-201ENST00000583731 91 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-0.22□□□□□ -2.45
COL7A1Q02388 AL021368.1-201ENST00000607490 540 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 AL121757.2-201ENST00000611223 313 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 AC007485.1-201ENST00000616755 206 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 MIR6502-201ENST00000617296 76 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 AC006386.1-201ENST00000619436 415 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 AC048344.4-201ENST00000619744 527 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 uc_338.10-201ENST00000621872 182 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 AC023510.2-201ENST00000622162 746 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.22□□□□□ -2.45
COL7A1Q02388 MIR382-201ENST00000637119 76 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 MIR655-201ENST00000362159 97 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 SNORD113-7-201ENST00000363762 77 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 RNA5SP245-201ENST00000364239 121 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 RNU6-522P-201ENST00000364497 107 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 MIR204-201ENST00000385200 110 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 MTCO2P27-201ENST00000420740 428 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 MTND3P21-201ENST00000433774 331 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 SNORA27.4-201ENST00000516650 95 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 SNORA18.6-201ENST00000516792 115 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 RNU7-116P-201ENST00000516940 62 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 AC026421.1-201ENST00000519101 163 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 AL118558.2-201ENST00000556294 238 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.23□□□□□ -2.45
COL7A1Q02388 AC004467.1-201ENST00000615678 330 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 AC124864.2-201ENST00000624736 186 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 MIR3674-201ENST00000636576 68 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 U6.109-201ENST00000636749 87 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 Y_RNA.101-201ENST00000363154 102 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 RNU6-254P-201ENST00000363377 107 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 RNU6-660P-201ENST00000364566 109 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 MIR582-201ENST00000365731 98 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 USP9YP30-201ENST00000430729 455 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 AC098614.3-201ENST00000438957 440 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-0.23□□□□□ -2.45
COL7A1Q02388 AC023449.1-201ENST00000454464 154 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 RNU7-167P-201ENST00000459160 62 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 TRAJ51-201ENST00000504127 63 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 RNU1-54P-201ENST00000517181 120 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.23□□□□□ -2.45
COL7A1Q02388 FRG2DP-202ENST00000566967 323 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 MIR4703-201ENST00000577728 79 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 MIR4306-201ENST00000583390 91 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 AP001542.1-201ENST00000591314 200 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 AC245884.10-201ENST00000597355 337 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 AC087752.4-201ENST00000605911 462 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 MIR8055-201ENST00000610739 97 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 AF246928.1-201ENST00000623768 87 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 MTND5P18-201ENST00000445624 1801 ntBASIC-0.23□□□□□ -2.45
COL7A1Q02388 MIR20A-201ENST00000362279 71 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 SNORD50.1-201ENST00000362987 71 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 SNORD114-10-201ENST00000363409 72 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 RNU6-82P-201ENST00000363970 107 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 RNU6-1090P-201ENST00000364065 94 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 Y_RNA.578-201ENST00000390903 88 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 MIR548I2-201ENST00000408348 149 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 RNU6-648P-201ENST00000410190 107 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 RNU6-1068P-201ENST00000410958 103 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 AL354751.2-201ENST00000415471 210 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 AC097635.1-201ENST00000450678 155 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.24□□□□□ -2.45
COL7A1Q02388 PCMTD1P1-201ENST00000455560 355 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 SNORD5.1-201ENST00000458800 75 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-0.24□□□□□ -2.45
COL7A1Q02388 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 Y_RNA.706-201ENST00000516933 99 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 180.8 ms