Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 RN7SKP19-201ENST00000516016 252 ntBASIC1.94□□□□□ -2.1
IRF9Q00978 RNU6-240P-201ENST00000516098 97 ntBASIC1.94□□□□□ -2.1
IRF9Q00978 SNORA44.1-201ENST00000517031 108 ntBASIC1.94□□□□□ -2.1
IRF9Q00978 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.94□□□□□ -2.1
IRF9Q00978 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
IRF9Q00978 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
IRF9Q00978 MIR302B-201ENST00000362188 73 ntBASIC1.93□□□□□ -2.1
IRF9Q00978 SNORD58C-201ENST00000365223 64 ntBASIC1.93□□□□□ -2.1
IRF9Q00978 Y_RNA.366-201ENST00000365540 102 ntBASIC1.93□□□□□ -2.1
IRF9Q00978 Y_RNA.537-201ENST00000384626 109 ntBASIC1.93□□□□□ -2.1
IRF9Q00978 MIR570-201ENST00000384917 97 ntBASIC1.93□□□□□ -2.1
IRF9Q00978 HMGN2P19-201ENST00000425149 265 ntBASIC1.93□□□□□ -2.1
IRF9Q00978 RPS29P29-201ENST00000456396 171 ntBASIC1.93□□□□□ -2.1
IRF9Q00978 RNU7-67P-201ENST00000459003 62 ntBASIC1.93□□□□□ -2.1
IRF9Q00978 AC005908.1-201ENST00000468701 347 ntBASIC1.93□□□□□ -2.1
IRF9Q00978 MIR4764-201ENST00000580680 88 ntBASIC1.93□□□□□ -2.1
IRF9Q00978 MIR4448-201ENST00000584360 86 ntBASIC1.93□□□□□ -2.1
IRF9Q00978 AL359881.1-201ENST00000602916 267 ntBASIC1.93□□□□□ -2.1
IRF9Q00978 MIR4791-201ENST00000607666 84 ntBASIC1.93□□□□□ -2.1
IRF9Q00978 AC243994.1-201ENST00000618627 109 ntBASIC1.93□□□□□ -2.1
IRF9Q00978 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
IRF9Q00978 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
IRF9Q00978 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
IRF9Q00978 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
IRF9Q00978 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.92□□□□□ -2.1
IRF9Q00978 snoU13.9-201ENST00000458927 103 ntBASIC1.92□□□□□ -2.1
IRF9Q00978 RPL23AP42-201ENST00000471152 471 ntBASIC1.92□□□□□ -2.1
IRF9Q00978 RNU6-781P-201ENST00000516377 101 ntBASIC1.92□□□□□ -2.1
IRF9Q00978 RNU7-53P-201ENST00000516705 60 ntBASIC1.92□□□□□ -2.1
IRF9Q00978 IGKV1-22-201ENST00000524313 326 ntBASIC1.92□□□□□ -2.1
IRF9Q00978 AL137067.1-201ENST00000615933 120 ntBASIC1.92□□□□□ -2.1
IRF9Q00978 MIR8063-201ENST00000621930 81 ntBASIC1.92□□□□□ -2.1
IRF9Q00978 MIR3914-2-201ENST00000637339 95 ntBASIC1.92□□□□□ -2.1
IRF9Q00978 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
IRF9Q00978 Y_RNA.563-201ENST00000384707 108 ntBASIC1.91□□□□□ -2.1
IRF9Q00978 MIR520C-201ENST00000385005 87 ntBASIC1.91□□□□□ -2.1
IRF9Q00978 SNORD41-201ENST00000386967 70 ntBASIC1.91□□□□□ -2.1
IRF9Q00978 SUMO2P12-201ENST00000405924 140 ntBASIC1.91□□□□□ -2.1
IRF9Q00978 RNU6-922P-201ENST00000516753 99 ntBASIC1.91□□□□□ -2.1
IRF9Q00978 RNU6-958P-201ENST00000516995 106 ntBASIC1.91□□□□□ -2.1
IRF9Q00978 AL096840.1-201ENST00000603287 93 ntBASIC1.91□□□□□ -2.1
IRF9Q00978 AL513534.2-201ENST00000603836 250 ntBASIC1.91□□□□□ -2.1
IRF9Q00978 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.91□□□□□ -2.1
IRF9Q00978 AC008133.2-201ENST00000624540 351 ntBASIC1.91□□□□□ -2.1
IRF9Q00978 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
IRF9Q00978 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
IRF9Q00978 SNORA51.10-201ENST00000384418 136 ntBASIC1.9□□□□□ -2.11
IRF9Q00978 RNA5SP489-201ENST00000410986 109 ntBASIC1.9□□□□□ -2.11
IRF9Q00978 HMGN2P38-201ENST00000423806 265 ntBASIC1.9□□□□□ -2.11
IRF9Q00978 HSPE1P24-201ENST00000450782 238 ntBASIC1.9□□□□□ -2.11
IRF9Q00978 snoU13.15-201ENST00000459407 104 ntBASIC1.9□□□□□ -2.11
IRF9Q00978 SNORA31.4-201ENST00000516049 129 ntBASIC1.9□□□□□ -2.11
IRF9Q00978 SNORD111.1-201ENST00000516421 86 ntBASIC1.9□□□□□ -2.11
IRF9Q00978 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.9□□□□□ -2.11
IRF9Q00978 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.9□□□□□ -2.11
IRF9Q00978 MIR219B-201ENST00000637023 88 ntBASIC1.9□□□□□ -2.11
IRF9Q00978 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
IRF9Q00978 MIR302D-201ENST00000362275 68 ntBASIC1.89□□□□□ -2.11
IRF9Q00978 RNU4-16P-201ENST00000364737 141 ntBASIC1.89□□□□□ -2.11
IRF9Q00978 MIRLET7F2-201ENST00000385277 83 ntBASIC1.89□□□□□ -2.11
IRF9Q00978 MIR676-201ENST00000390702 67 ntBASIC1.89□□□□□ -2.11
IRF9Q00978 Y_RNA.630-201ENST00000411370 108 ntBASIC1.89□□□□□ -2.11
IRF9Q00978 RNU7-73P-201ENST00000458743 63 ntBASIC1.89□□□□□ -2.11
IRF9Q00978 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.89□□□□□ -2.11
IRF9Q00978 RNU6-250P-201ENST00000516958 103 ntBASIC1.89□□□□□ -2.11
IRF9Q00978 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.89□□□□□ -2.11
IRF9Q00978 AC021443.1-201ENST00000604478 211 ntBASIC1.89□□□□□ -2.11
IRF9Q00978 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.89□□□□□ -2.11
IRF9Q00978 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.89□□□□□ -2.11
IRF9Q00978 U6.95-201ENST00000636931 70 ntBASIC1.89□□□□□ -2.11
IRF9Q00978 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
IRF9Q00978 Y_RNA.629-201ENST00000411368 105 ntBASIC1.88□□□□□ -2.11
IRF9Q00978 RN7SL274P-201ENST00000492268 272 ntBASIC1.88□□□□□ -2.11
IRF9Q00978 MIR3198-2-201ENST00000577868 80 ntBASIC1.88□□□□□ -2.11
IRF9Q00978 HSPE1P19-201ENST00000603327 295 ntBASIC1.88□□□□□ -2.11
IRF9Q00978 AL357312.1-201ENST00000603879 298 ntBASIC1.88□□□□□ -2.11
IRF9Q00978 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
IRF9Q00978 MIR7843-201ENST00000622274 79 ntBASIC1.88□□□□□ -2.11
IRF9Q00978 WWP1P1-201ENST00000466609 2769 ntBASIC1.88□□□□□ -2.11
IRF9Q00978 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
IRF9Q00978 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
IRF9Q00978 MIR504-201ENST00000385065 83 ntBASIC1.87□□□□□ -2.11
IRF9Q00978 MIR1263-201ENST00000408324 86 ntBASIC1.87□□□□□ -2.11
IRF9Q00978 snoU13.16-201ENST00000459350 104 ntBASIC1.87□□□□□ -2.11
IRF9Q00978 GHRLOS.1-201ENST00000610995 70 ntBASIC1.87□□□□□ -2.11
IRF9Q00978 AC025166.1-201ENST00000612411 163 ntBASIC1.87□□□□□ -2.11
IRF9Q00978 uc_338.20-201ENST00000621563 178 ntBASIC1.87□□□□□ -2.11
IRF9Q00978 AC021613.1-201ENST00000623880 111 ntBASIC1.87□□□□□ -2.11
IRF9Q00978 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.87□□□□□ -2.11
IRF9Q00978 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
IRF9Q00978 SNORD114-1-201ENST00000362705 72 ntBASIC1.86□□□□□ -2.11
IRF9Q00978 Y_RNA.81-201ENST00000362997 102 ntBASIC1.86□□□□□ -2.11
IRF9Q00978 Y_RNA.273-201ENST00000364703 102 ntBASIC1.86□□□□□ -2.11
IRF9Q00978 SNORD1A-201ENST00000364968 72 ntBASIC1.86□□□□□ -2.11
IRF9Q00978 Y_RNA.346-201ENST00000365385 112 ntBASIC1.86□□□□□ -2.11
IRF9Q00978 RNA5SP136-201ENST00000410906 107 ntBASIC1.86□□□□□ -2.11
IRF9Q00978 RNU7-45P-201ENST00000459460 63 ntBASIC1.86□□□□□ -2.11
IRF9Q00978 RNU7-41P-201ENST00000515917 61 ntBASIC1.86□□□□□ -2.11
IRF9Q00978 RNY4P20-201ENST00000516678 93 ntBASIC1.86□□□□□ -2.11
IRF9Q00978 MIR514B-201ENST00000516774 80 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms