Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 MIR548AO-201ENST00000579992 96 ntBASIC0.98□□□□□ -2.25
CDK3Q00526 Y_RNA.20-201ENST00000362479 113 ntBASIC0.97□□□□□ -2.25
CDK3Q00526 RNY4P28-201ENST00000365281 93 ntBASIC0.97□□□□□ -2.25
CDK3Q00526 Y_RNA.478-201ENST00000384358 107 ntBASIC0.97□□□□□ -2.25
CDK3Q00526 Y_RNA.539-201ENST00000384635 107 ntBASIC0.97□□□□□ -2.25
CDK3Q00526 MIR200A-201ENST00000384875 90 ntBASIC0.97□□□□□ -2.25
CDK3Q00526 RNU6-938P-201ENST00000411285 103 ntBASIC0.97□□□□□ -2.25
CDK3Q00526 RNU6-561P-201ENST00000516222 102 ntBASIC0.97□□□□□ -2.25
CDK3Q00526 SNORD36C-201ENST00000516733 66 ntBASIC0.97□□□□□ -2.25
CDK3Q00526 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.97□□□□□ -2.25
CDK3Q00526 AC134878.1-201ENST00000619901 243 ntBASIC0.97□□□□□ -2.25
CDK3Q00526 MIR6516-201ENST00000630554 81 ntBASIC0.97□□□□□ -2.25
CDK3Q00526 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.97□□□□□ -2.25
CDK3Q00526 RNU6-103P-201ENST00000363686 107 ntBASIC0.96□□□□□ -2.26
CDK3Q00526 RNU6-654P-201ENST00000364373 107 ntBASIC0.96□□□□□ -2.26
CDK3Q00526 SNORD114-24-201ENST00000365029 72 ntBASIC0.96□□□□□ -2.26
CDK3Q00526 RNU6-728P-201ENST00000365375 104 ntBASIC0.96□□□□□ -2.26
CDK3Q00526 SNORA22-201ENST00000383907 134 ntBASIC0.96□□□□□ -2.26
CDK3Q00526 Y_RNA.452-201ENST00000384202 108 ntBASIC0.96□□□□□ -2.26
CDK3Q00526 SNORA22C-201ENST00000384614 134 ntBASIC0.96□□□□□ -2.26
CDK3Q00526 SNORA40.5-201ENST00000391061 128 ntBASIC0.96□□□□□ -2.26
CDK3Q00526 RNU6-493P-201ENST00000391321 108 ntBASIC0.96□□□□□ -2.26
CDK3Q00526 MIR942-201ENST00000401111 86 ntBASIC0.96□□□□□ -2.26
CDK3Q00526 SNORA18.4-201ENST00000516440 124 ntBASIC0.96□□□□□ -2.26
CDK3Q00526 MIR2115-201ENST00000516657 100 ntBASIC0.96□□□□□ -2.26
CDK3Q00526 RNU6-958P-201ENST00000516995 106 ntBASIC0.96□□□□□ -2.26
CDK3Q00526 MIR4452-201ENST00000583004 71 ntBASIC0.96□□□□□ -2.26
CDK3Q00526 AC131055.1-201ENST00000584626 316 ntBASIC0.96□□□□□ -2.26
CDK3Q00526 MIR3149-201ENST00000584629 83 ntBASIC0.96□□□□□ -2.26
CDK3Q00526 AC097639.2-201ENST00000603159 172 ntBASIC0.96□□□□□ -2.26
CDK3Q00526 7SK.10-201ENST00000621414 298 ntBASIC0.96□□□□□ -2.26
CDK3Q00526 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
CDK3Q00526 Y_RNA.60-201ENST00000362831 98 ntBASIC0.95□□□□□ -2.26
CDK3Q00526 Y_RNA.193-201ENST00000363979 102 ntBASIC0.95□□□□□ -2.26
CDK3Q00526 Y_RNA.224-201ENST00000364308 111 ntBASIC0.95□□□□□ -2.26
CDK3Q00526 RNU6-396P-201ENST00000365369 105 ntBASIC0.95□□□□□ -2.26
CDK3Q00526 SNORA79-201ENST00000408376 140 ntBASIC0.95□□□□□ -2.26
CDK3Q00526 AF228730.3-201ENST00000436691 102 ntBASIC0.95□□□□□ -2.26
CDK3Q00526 Y_RNA.680-201ENST00000516441 93 ntBASIC0.95□□□□□ -2.26
CDK3Q00526 RNU6-113P-201ENST00000516653 101 ntBASIC0.95□□□□□ -2.26
CDK3Q00526 AP000942.4-201ENST00000604811 241 ntBASIC0.95□□□□□ -2.26
CDK3Q00526 AL162730.1-201ENST00000605734 292 ntBASIC0.95□□□□□ -2.26
CDK3Q00526 RNU6-923P-201ENST00000364753 107 ntBASIC0.94□□□□□ -2.26
CDK3Q00526 Y_RNA.307-201ENST00000365022 117 ntBASIC0.94□□□□□ -2.26
CDK3Q00526 Y_RNA.447-201ENST00000384184 113 ntBASIC0.94□□□□□ -2.26
CDK3Q00526 SNORA27-201ENST00000384323 126 ntBASIC0.94□□□□□ -2.26
CDK3Q00526 SNORD58.1-201ENST00000391313 66 ntBASIC0.94□□□□□ -2.26
CDK3Q00526 RNA5SP95-201ENST00000410319 137 ntBASIC0.94□□□□□ -2.26
CDK3Q00526 snoU13.16-201ENST00000459350 104 ntBASIC0.94□□□□□ -2.26
CDK3Q00526 RNU6-197P-201ENST00000516680 100 ntBASIC0.94□□□□□ -2.26
CDK3Q00526 MIR4744-201ENST00000581563 82 ntBASIC0.94□□□□□ -2.26
CDK3Q00526 AC012676.2-201ENST00000619258 186 ntBASIC0.94□□□□□ -2.26
CDK3Q00526 AL391516.1-201ENST00000554380 2449 ntBASIC0.93□□□□□ -2.26
CDK3Q00526 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.93□□□□□ -2.26
CDK3Q00526 Y_RNA.144-201ENST00000363521 113 ntBASIC0.93□□□□□ -2.26
CDK3Q00526 SNORA20.1-201ENST00000364790 130 ntBASIC0.93□□□□□ -2.26
CDK3Q00526 SNORA24-201ENST00000384096 131 ntBASIC0.93□□□□□ -2.26
CDK3Q00526 RNU6-463P-201ENST00000384340 107 ntBASIC0.93□□□□□ -2.26
CDK3Q00526 MIR532-201ENST00000385025 91 ntBASIC0.93□□□□□ -2.26
CDK3Q00526 Y_RNA.626-201ENST00000411288 95 ntBASIC0.93□□□□□ -2.26
CDK3Q00526 AL121914.1-201ENST00000450188 156 ntBASIC0.93□□□□□ -2.26
CDK3Q00526 RPS29P24-201ENST00000486345 171 ntBASIC0.93□□□□□ -2.26
CDK3Q00526 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.93□□□□□ -2.26
CDK3Q00526 PDCD5P2-201ENST00000507570 312 ntBASIC0.93□□□□□ -2.26
CDK3Q00526 UBL5P1-201ENST00000507979 193 ntBASIC0.93□□□□□ -2.26
CDK3Q00526 RNU6-1023P-201ENST00000516137 106 ntBASIC0.93□□□□□ -2.26
CDK3Q00526 AC036111.3-201ENST00000526389 112 ntBASIC0.93□□□□□ -2.26
CDK3Q00526 HSPE1P19-201ENST00000603327 295 ntBASIC0.93□□□□□ -2.26
CDK3Q00526 RNU2-4P-201ENST00000606190 192 ntBASIC0.93□□□□□ -2.26
CDK3Q00526 Y_RNA.7-201ENST00000362352 102 ntBASIC0.92□□□□□ -2.26
CDK3Q00526 Y_RNA.23-201ENST00000362496 106 ntBASIC0.92□□□□□ -2.26
CDK3Q00526 SNORD113.3-201ENST00000364630 78 ntBASIC0.92□□□□□ -2.26
CDK3Q00526 RNU6-1189P-201ENST00000383958 107 ntBASIC0.92□□□□□ -2.26
CDK3Q00526 Y_RNA.410-201ENST00000383992 113 ntBASIC0.92□□□□□ -2.26
CDK3Q00526 SNORA1-201ENST00000384107 130 ntBASIC0.92□□□□□ -2.26
CDK3Q00526 SNORA2B-201ENST00000384583 137 ntBASIC0.92□□□□□ -2.26
CDK3Q00526 MIR520E-201ENST00000384867 87 ntBASIC0.92□□□□□ -2.26
CDK3Q00526 RNU6-613P-201ENST00000410412 108 ntBASIC0.92□□□□□ -2.26
CDK3Q00526 RNU4-71P-201ENST00000516258 113 ntBASIC0.92□□□□□ -2.26
CDK3Q00526 RNU6-111P-201ENST00000517179 105 ntBASIC0.92□□□□□ -2.26
CDK3Q00526 MIR4661-201ENST00000582720 75 ntBASIC0.92□□□□□ -2.26
CDK3Q00526 RNU6-94P-201ENST00000607728 107 ntBASIC0.92□□□□□ -2.26
CDK3Q00526 MIR6857-201ENST00000613267 93 ntBASIC0.92□□□□□ -2.26
CDK3Q00526 AC106800.4-201ENST00000614905 153 ntBASIC0.92□□□□□ -2.26
CDK3Q00526 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
CDK3Q00526 MIR373-201ENST00000362273 69 ntBASIC0.91□□□□□ -2.26
CDK3Q00526 RNU6-578P-201ENST00000390980 103 ntBASIC0.91□□□□□ -2.26
CDK3Q00526 SNORD111-201ENST00000408139 94 ntBASIC0.91□□□□□ -2.26
CDK3Q00526 RNU6-994P-201ENST00000410507 111 ntBASIC0.91□□□□□ -2.26
CDK3Q00526 FABP5P4-201ENST00000437203 171 ntBASIC0.91□□□□□ -2.26
CDK3Q00526 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.91□□□□□ -2.26
CDK3Q00526 Y_RNA.797-201ENST00000515977 94 ntBASIC0.91□□□□□ -2.26
CDK3Q00526 RNU7-53P-201ENST00000516705 60 ntBASIC0.91□□□□□ -2.26
CDK3Q00526 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
CDK3Q00526 RNU4-43P-201ENST00000410628 137 ntBASIC0.9□□□□□ -2.27
CDK3Q00526 AL138752.1-201ENST00000452964 351 ntBASIC0.9□□□□□ -2.27
CDK3Q00526 RNU7-73P-201ENST00000458743 63 ntBASIC0.9□□□□□ -2.27
CDK3Q00526 MIR3973-201ENST00000579824 107 ntBASIC0.9□□□□□ -2.27
CDK3Q00526 MIR4308-201ENST00000580634 81 ntBASIC0.9□□□□□ -2.27
CDK3Q00526 MIR3129-201ENST00000581095 76 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 179.6 ms