Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 MIR3129-201ENST00000581095 76 ntBASIC-1.08□□□□□ -2.58
PRKDCP78527 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.08□□□□□ -2.58
PRKDCP78527 AC073534.2-201ENST00000620377 381 ntBASIC-1.08□□□□□ -2.58
PRKDCP78527 MIR3674-201ENST00000636576 68 ntBASIC-1.08□□□□□ -2.58
PRKDCP78527 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.09□□□□□ -2.58
PRKDCP78527 MIR5704-201ENST00000584029 77 ntBASIC-1.09□□□□□ -2.58
PRKDCP78527 AC099654.12-201ENST00000639868 649 ntBASIC-1.09□□□□□ -2.58
PRKDCP78527 USP9YP30-201ENST00000430729 455 ntBASIC-1.09□□□□□ -2.58
PRKDCP78527 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.09□□□□□ -2.58
PRKDCP78527 MIR466-201ENST00000580653 84 ntBASIC-1.09□□□□□ -2.58
PRKDCP78527 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.09□□□□□ -2.58
PRKDCP78527 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.09□□□□□ -2.58
PRKDCP78527 RNU6-413P-201ENST00000384115 107 ntBASIC-1.09□□□□□ -2.58
PRKDCP78527 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.09□□□□□ -2.58
PRKDCP78527 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-1.09□□□□□ -2.58
PRKDCP78527 MTND5P40-201ENST00000559945 246 ntBASIC-1.09□□□□□ -2.58
PRKDCP78527 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.09□□□□□ -2.58
PRKDCP78527 AC091931.1-201ENST00000623488 728 ntBASIC-1.09□□□□□ -2.58
PRKDCP78527 SEPT14P19-203ENST00000633205 211 ntBASIC-1.09□□□□□ -2.58
PRKDCP78527 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-1.1□□□□□ -2.59
PRKDCP78527 AC023449.1-201ENST00000454464 154 ntBASIC-1.1□□□□□ -2.59
PRKDCP78527 RNU7-96P-201ENST00000459535 64 ntBASIC-1.1□□□□□ -2.59
PRKDCP78527 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.1□□□□□ -2.59
PRKDCP78527 MIR4307-201ENST00000582802 84 ntBASIC-1.1□□□□□ -2.59
PRKDCP78527 U6.109-201ENST00000636749 87 ntBASIC-1.1□□□□□ -2.59
PRKDCP78527 Y_RNA.2-201ENST00000362330 96 ntBASIC-1.1□□□□□ -2.59
PRKDCP78527 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.1□□□□□ -2.59
PRKDCP78527 SNORD115-23-201ENST00000364461 82 ntBASIC-1.1□□□□□ -2.59
PRKDCP78527 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.1□□□□□ -2.59
PRKDCP78527 SNORA36B-201ENST00000410438 131 ntBASIC-1.1□□□□□ -2.59
PRKDCP78527 RNU6-531P-201ENST00000516694 104 ntBASIC-1.1□□□□□ -2.59
PRKDCP78527 AL133173.2-201ENST00000614270 90 ntBASIC-1.1□□□□□ -2.59
PRKDCP78527 RNU6-653P-201ENST00000363074 106 ntBASIC-1.1□□□□□ -2.59
PRKDCP78527 CYCSP46-201ENST00000423569 204 ntBASIC-1.1□□□□□ -2.59
PRKDCP78527 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1.1□□□□□ -2.59
PRKDCP78527 SNORD114-10-201ENST00000363409 72 ntBASIC-1.11□□□□□ -2.59
PRKDCP78527 RNU6-108P-201ENST00000365558 107 ntBASIC-1.11□□□□□ -2.59
PRKDCP78527 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.11□□□□□ -2.59
PRKDCP78527 RNU6-1145P-201ENST00000384246 107 ntBASIC-1.11□□□□□ -2.59
PRKDCP78527 Y_RNA.482-201ENST00000384377 111 ntBASIC-1.11□□□□□ -2.59
PRKDCP78527 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-1.11□□□□□ -2.59
PRKDCP78527 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-1.11□□□□□ -2.59
PRKDCP78527 AC055872.1-201ENST00000570978 278 ntBASIC-1.11□□□□□ -2.59
PRKDCP78527 AC007494.3-201ENST00000624660 743 ntBASIC-1.11□□□□□ -2.59
PRKDCP78527 SNORD115-35-201ENST00000365122 82 ntBASIC-1.11□□□□□ -2.59
PRKDCP78527 RNU4-20P-201ENST00000365601 151 ntBASIC-1.11□□□□□ -2.59
PRKDCP78527 RNU6-926P-201ENST00000384075 107 ntBASIC-1.11□□□□□ -2.59
PRKDCP78527 RNU7-79P-201ENST00000516082 62 ntBASIC-1.11□□□□□ -2.59
PRKDCP78527 AC005771.1-201ENST00000585581 349 ntBASIC-1.11□□□□□ -2.59
PRKDCP78527 AL163152.1-201ENST00000642001 374 ntBASIC-1.11□□□□□ -2.59
PRKDCP78527 MIR1-2-201ENST00000384961 85 ntBASIC-1.11□□□□□ -2.59
PRKDCP78527 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.11□□□□□ -2.59
PRKDCP78527 SNORA20-201ENST00000384662 132 ntBASIC-1.12□□□□□ -2.59
PRKDCP78527 RNY3P9-201ENST00000384727 106 ntBASIC-1.12□□□□□ -2.59
PRKDCP78527 Z82188.1-201ENST00000436709 154 ntBASIC-1.12□□□□□ -2.59
PRKDCP78527 RNU7-80P-201ENST00000459562 61 ntBASIC-1.12□□□□□ -2.59
PRKDCP78527 RNU6-164P-201ENST00000364604 103 ntBASIC-1.12□□□□□ -2.59
PRKDCP78527 MTND4LP18-201ENST00000526864 291 ntBASIC-1.12□□□□□ -2.59
PRKDCP78527 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.12□□□□□ -2.59
PRKDCP78527 MIR4460-201ENST00000577862 86 ntBASIC-1.12□□□□□ -2.59
PRKDCP78527 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.12□□□□□ -2.59
PRKDCP78527 AC018638.8-201ENST00000588755 281 ntBASIC-1.12□□□□□ -2.59
PRKDCP78527 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.12□□□□□ -2.59
PRKDCP78527 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.12□□□□□ -2.59
PRKDCP78527 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.12□□□□□ -2.59
PRKDCP78527 AC093783.1-201ENST00000612976 329 ntBASIC-1.12□□□□□ -2.59
PRKDCP78527 AC006927.2-201ENST00000639256 389 ntBASIC-1.12□□□□□ -2.59
PRKDCP78527 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.13□□□□□ -2.59
PRKDCP78527 AC108019.1-201ENST00000512540 175 ntBASIC-1.13□□□□□ -2.59
PRKDCP78527 RNU6-433P-201ENST00000363216 104 ntBASIC-1.13□□□□□ -2.59
PRKDCP78527 RNU6-169P-201ENST00000365336 107 ntBASIC-1.13□□□□□ -2.59
PRKDCP78527 MTND3P21-201ENST00000433774 331 ntBASIC-1.13□□□□□ -2.59
PRKDCP78527 AC097635.1-201ENST00000450678 155 ntBASIC-1.13□□□□□ -2.59
PRKDCP78527 AC145350.1-201ENST00000567426 208 ntBASIC-1.13□□□□□ -2.59
PRKDCP78527 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.13□□□□□ -2.59
PRKDCP78527 RNU4-75P-201ENST00000364621 146 ntBASIC-1.13□□□□□ -2.59
PRKDCP78527 RNU6-533P-201ENST00000384144 107 ntBASIC-1.13□□□□□ -2.59
PRKDCP78527 MIR548H3-201ENST00000408771 118 ntBASIC-1.13□□□□□ -2.59
PRKDCP78527 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-1.13□□□□□ -2.59
PRKDCP78527 AC008507.4-201ENST00000585464 127 ntBASIC-1.13□□□□□ -2.59
PRKDCP78527 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.13□□□□□ -2.59
PRKDCP78527 Y_RNA.302-201ENST00000364997 102 ntBASIC-1.13□□□□□ -2.59
PRKDCP78527 RNU6-1329P-201ENST00000365664 107 ntBASIC-1.13□□□□□ -2.59
PRKDCP78527 SNORA51.5-201ENST00000384126 131 ntBASIC-1.13□□□□□ -2.59
PRKDCP78527 RNU6-905P-201ENST00000384434 107 ntBASIC-1.13□□□□□ -2.59
PRKDCP78527 MIR181A1-201ENST00000385026 110 ntBASIC-1.13□□□□□ -2.59
PRKDCP78527 MIR599-201ENST00000385069 95 ntBASIC-1.13□□□□□ -2.59
PRKDCP78527 RNU6-550P-201ENST00000391057 101 ntBASIC-1.13□□□□□ -2.59
PRKDCP78527 YWHAEP2-201ENST00000580066 112 ntBASIC-1.13□□□□□ -2.59
PRKDCP78527 AC019193.3-201ENST00000609144 554 ntBASIC-1.13□□□□□ -2.59
PRKDCP78527 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.14□□□□□ -2.59
PRKDCP78527 RNU6-501P-201ENST00000364072 100 ntBASIC-1.14□□□□□ -2.59
PRKDCP78527 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.14□□□□□ -2.59
PRKDCP78527 AC027807.2-201ENST00000616099 408 ntBASIC-1.14□□□□□ -2.59
PRKDCP78527 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.14□□□□□ -2.59
PRKDCP78527 Y_RNA.472-201ENST00000384322 102 ntBASIC-1.14□□□□□ -2.59
PRKDCP78527 Y_RNA.578-201ENST00000390903 88 ntBASIC-1.14□□□□□ -2.59
PRKDCP78527 AL078595.1-201ENST00000404458 226 ntBASIC-1.14□□□□□ -2.59
PRKDCP78527 AC022878.1-201ENST00000530684 149 ntBASIC-1.14□□□□□ -2.59
PRKDCP78527 RNU6-194P-201ENST00000363862 105 ntBASIC-1.14□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 271.6 ms