Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 MIR19B1-201ENST00000384829 87 ntBASIC1□□□□□ -2.25
CX3CL1P78423 MIR3660-201ENST00000584845 100 ntBASIC1□□□□□ -2.25
CX3CL1P78423 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1□□□□□ -2.25
CX3CL1P78423 Y_RNA.75-201ENST00000362927 97 ntBASIC0.99□□□□□ -2.25
CX3CL1P78423 RNU6-1020P-201ENST00000363684 107 ntBASIC0.99□□□□□ -2.25
CX3CL1P78423 Y_RNA.410-201ENST00000383992 113 ntBASIC0.99□□□□□ -2.25
CX3CL1P78423 RNU6-643P-201ENST00000384018 107 ntBASIC0.99□□□□□ -2.25
CX3CL1P78423 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
CX3CL1P78423 SNORD77.3-201ENST00000391113 65 ntBASIC0.99□□□□□ -2.25
CX3CL1P78423 RNU7-67P-201ENST00000459003 62 ntBASIC0.99□□□□□ -2.25
CX3CL1P78423 RNU7-90P-201ENST00000459216 62 ntBASIC0.99□□□□□ -2.25
CX3CL1P78423 RPS23P4-201ENST00000487908 423 ntBASIC0.99□□□□□ -2.25
CX3CL1P78423 RNA5SP458-201ENST00000516188 119 ntBASIC0.99□□□□□ -2.25
CX3CL1P78423 RNU11-2P-201ENST00000516898 142 ntBASIC0.99□□□□□ -2.25
CX3CL1P78423 RNU6-388P-201ENST00000517012 105 ntBASIC0.99□□□□□ -2.25
CX3CL1P78423 RNU6-389P-201ENST00000517048 105 ntBASIC0.99□□□□□ -2.25
CX3CL1P78423 AC141273.2-201ENST00000618989 130 ntBASIC0.99□□□□□ -2.25
CX3CL1P78423 AL353770.2-201ENST00000620024 78 ntBASIC0.99□□□□□ -2.25
CX3CL1P78423 MIR6516-201ENST00000630554 81 ntBASIC0.99□□□□□ -2.25
CX3CL1P78423 U6.106-201ENST00000636360 105 ntBASIC0.99□□□□□ -2.25
CX3CL1P78423 MIR376A2-201ENST00000636782 80 ntBASIC0.99□□□□□ -2.25
CX3CL1P78423 RNU6-978P-201ENST00000364371 103 ntBASIC0.98□□□□□ -2.25
CX3CL1P78423 RNU6-654P-201ENST00000364373 107 ntBASIC0.98□□□□□ -2.25
CX3CL1P78423 RNU6-1189P-201ENST00000383958 107 ntBASIC0.98□□□□□ -2.25
CX3CL1P78423 Y_RNA.476-201ENST00000384347 108 ntBASIC0.98□□□□□ -2.25
CX3CL1P78423 Y_RNA.515-201ENST00000384535 112 ntBASIC0.98□□□□□ -2.25
CX3CL1P78423 Y_RNA.542-201ENST00000384641 111 ntBASIC0.98□□□□□ -2.25
CX3CL1P78423 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.98□□□□□ -2.25
CX3CL1P78423 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.98□□□□□ -2.25
CX3CL1P78423 RPS29P24-201ENST00000486345 171 ntBASIC0.98□□□□□ -2.25
CX3CL1P78423 MIR378D2-201ENST00000580636 98 ntBASIC0.98□□□□□ -2.25
CX3CL1P78423 MIR3129-201ENST00000581095 76 ntBASIC0.98□□□□□ -2.25
CX3CL1P78423 AL157834.3-201ENST00000615543 103 ntBASIC0.98□□□□□ -2.25
CX3CL1P78423 Y_RNA.440-201ENST00000384120 114 ntBASIC0.97□□□□□ -2.25
CX3CL1P78423 Y_RNA.552-201ENST00000384665 112 ntBASIC0.97□□□□□ -2.25
CX3CL1P78423 MRPL35P3-201ENST00000421557 364 ntBASIC0.97□□□□□ -2.25
CX3CL1P78423 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.97□□□□□ -2.25
CX3CL1P78423 snoU13.16-201ENST00000459350 104 ntBASIC0.97□□□□□ -2.25
CX3CL1P78423 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.97□□□□□ -2.25
CX3CL1P78423 RNU6-237P-201ENST00000515985 71 ntBASIC0.97□□□□□ -2.25
CX3CL1P78423 SNORD116-25-201ENST00000516517 92 ntBASIC0.97□□□□□ -2.25
CX3CL1P78423 RNU6-958P-201ENST00000516995 106 ntBASIC0.97□□□□□ -2.25
CX3CL1P78423 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.97□□□□□ -2.25
CX3CL1P78423 AC023827.1-201ENST00000569247 97 ntBASIC0.97□□□□□ -2.25
CX3CL1P78423 AL365205.2-201ENST00000594586 68 ntBASIC0.97□□□□□ -2.25
CX3CL1P78423 Y_RNA.297-201ENST00000364950 91 ntBASIC0.96□□□□□ -2.26
CX3CL1P78423 RNU6-913P-201ENST00000390913 95 ntBASIC0.96□□□□□ -2.26
CX3CL1P78423 RNU6-613P-201ENST00000410412 108 ntBASIC0.96□□□□□ -2.26
CX3CL1P78423 RNU7-73P-201ENST00000458743 63 ntBASIC0.96□□□□□ -2.26
CX3CL1P78423 RNU7-96P-201ENST00000459535 64 ntBASIC0.96□□□□□ -2.26
CX3CL1P78423 SNORD124-201ENST00000459577 104 ntBASIC0.96□□□□□ -2.26
CX3CL1P78423 MIR2115-201ENST00000516657 100 ntBASIC0.96□□□□□ -2.26
CX3CL1P78423 MRPS18CP4-201ENST00000535821 231 ntBASIC0.96□□□□□ -2.26
CX3CL1P78423 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.96□□□□□ -2.26
CX3CL1P78423 MIR5197-201ENST00000583721 112 ntBASIC0.96□□□□□ -2.26
CX3CL1P78423 MIR4781-201ENST00000585250 76 ntBASIC0.96□□□□□ -2.26
CX3CL1P78423 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.95□□□□□ -2.26
CX3CL1P78423 RNA5SP95-201ENST00000410319 137 ntBASIC0.95□□□□□ -2.26
CX3CL1P78423 AL138752.1-201ENST00000452964 351 ntBASIC0.95□□□□□ -2.26
CX3CL1P78423 RNU6-998P-201ENST00000515894 101 ntBASIC0.95□□□□□ -2.26
CX3CL1P78423 RNU6-1219P-201ENST00000516143 112 ntBASIC0.95□□□□□ -2.26
CX3CL1P78423 RNU7-53P-201ENST00000516705 60 ntBASIC0.95□□□□□ -2.26
CX3CL1P78423 AC022559.1-201ENST00000520905 205 ntBASIC0.95□□□□□ -2.26
CX3CL1P78423 AC131055.1-201ENST00000584626 316 ntBASIC0.95□□□□□ -2.26
CX3CL1P78423 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
CX3CL1P78423 Y_RNA.233-201ENST00000364407 101 ntBASIC0.94□□□□□ -2.26
CX3CL1P78423 RNU6-396P-201ENST00000365369 105 ntBASIC0.94□□□□□ -2.26
CX3CL1P78423 RNU6-1292P-201ENST00000383856 107 ntBASIC0.94□□□□□ -2.26
CX3CL1P78423 MIR1285-1-201ENST00000408593 84 ntBASIC0.94□□□□□ -2.26
CX3CL1P78423 AC006461.1-201ENST00000412637 326 ntBASIC0.94□□□□□ -2.26
CX3CL1P78423 AC090844.1-201ENST00000422019 156 ntBASIC0.94□□□□□ -2.26
CX3CL1P78423 Y_RNA.644-201ENST00000459006 113 ntBASIC0.94□□□□□ -2.26
CX3CL1P78423 Y_RNA.674-201ENST00000516362 113 ntBASIC0.94□□□□□ -2.26
CX3CL1P78423 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CX3CL1P78423 RNU6-200P-201ENST00000364743 107 ntBASIC0.93□□□□□ -2.26
CX3CL1P78423 RNU6-125P-201ENST00000384505 107 ntBASIC0.93□□□□□ -2.26
CX3CL1P78423 AL035398.1-201ENST00000430869 322 ntBASIC0.93□□□□□ -2.26
CX3CL1P78423 RPS29P28-201ENST00000446439 141 ntBASIC0.93□□□□□ -2.26
CX3CL1P78423 RNU2-11P-201ENST00000459191 187 ntBASIC0.93□□□□□ -2.26
CX3CL1P78423 OR2A41P-201ENST00000473586 105 ntBASIC0.93□□□□□ -2.26
CX3CL1P78423 RNU6-138P-201ENST00000515952 107 ntBASIC0.93□□□□□ -2.26
CX3CL1P78423 AC036111.3-201ENST00000526389 112 ntBASIC0.93□□□□□ -2.26
CX3CL1P78423 MIR4431-201ENST00000579990 94 ntBASIC0.93□□□□□ -2.26
CX3CL1P78423 snoU13.31-201ENST00000607291 104 ntBASIC0.93□□□□□ -2.26
CX3CL1P78423 MIR6078-201ENST00000611069 100 ntBASIC0.93□□□□□ -2.26
CX3CL1P78423 AC106800.4-201ENST00000614905 153 ntBASIC0.93□□□□□ -2.26
CX3CL1P78423 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
CX3CL1P78423 MIR200A-201ENST00000384875 90 ntBASIC0.92□□□□□ -2.26
CX3CL1P78423 MT-TN-201ENST00000387400 73 ntBASIC0.92□□□□□ -2.26
CX3CL1P78423 MIR548I3-201ENST00000408378 149 ntBASIC0.92□□□□□ -2.26
CX3CL1P78423 HMGN1P33-201ENST00000432945 451 ntBASIC0.92□□□□□ -2.26
CX3CL1P78423 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.92□□□□□ -2.26
CX3CL1P78423 AC072026.1-201ENST00000605023 201 ntBASIC0.92□□□□□ -2.26
CX3CL1P78423 AL020996.3-201ENST00000606617 222 ntBASIC0.92□□□□□ -2.26
CX3CL1P78423 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.91□□□□□ -2.26
CX3CL1P78423 MIR377-201ENST00000362145 69 ntBASIC0.91□□□□□ -2.26
CX3CL1P78423 MIR342-201ENST00000362212 99 ntBASIC0.91□□□□□ -2.26
CX3CL1P78423 Y_RNA.257-201ENST00000364596 102 ntBASIC0.91□□□□□ -2.26
CX3CL1P78423 SNORD114-24-201ENST00000365029 72 ntBASIC0.91□□□□□ -2.26
CX3CL1P78423 SNORA2B-201ENST00000384583 137 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 186.1 ms