Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 MIR3681-201ENST00000580089 72 ntBASIC-1.11□□□□□ -2.59
HIST1H3AP68431 DEFB117-201ENST00000602356 141 ntBASIC-1.11□□□□□ -2.59
HIST1H3AP68431 MTND5P32-201ENST00000560711 1802 ntBASIC-1.11□□□□□ -2.59
HIST1H3AP68431 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.12□□□□□ -2.59
HIST1H3AP68431 RNU6-949P-201ENST00000384040 107 ntBASIC-1.12□□□□□ -2.59
HIST1H3AP68431 SPINT5P-201ENST00000448174 155 ntBASIC-1.12□□□□□ -2.59
HIST1H3AP68431 RNU7-141P-201ENST00000459304 62 ntBASIC-1.12□□□□□ -2.59
HIST1H3AP68431 RNU6-566P-201ENST00000516790 107 ntBASIC-1.12□□□□□ -2.59
HIST1H3AP68431 RNU7-188P-201ENST00000517063 64 ntBASIC-1.12□□□□□ -2.59
HIST1H3AP68431 RN7SKP295-201ENST00000517264 153 ntBASIC-1.12□□□□□ -2.59
HIST1H3AP68431 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.12□□□□□ -2.59
HIST1H3AP68431 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.12□□□□□ -2.59
HIST1H3AP68431 NBR2-204ENST00000587322 63 ntBASIC-1.12□□□□□ -2.59
HIST1H3AP68431 AC005357.1-201ENST00000588399 301 ntBASIC-1.12□□□□□ -2.59
HIST1H3AP68431 AC011373.1-201ENST00000607270 237 ntBASIC-1.12□□□□□ -2.59
HIST1H3AP68431 AC011476.5-201ENST00000615594 130 ntBASIC-1.12□□□□□ -2.59
HIST1H3AP68431 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.13□□□□□ -2.59
HIST1H3AP68431 Y_RNA.230-201ENST00000364348 109 ntBASIC-1.13□□□□□ -2.59
HIST1H3AP68431 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.13□□□□□ -2.59
HIST1H3AP68431 SNORD83B-201ENST00000386745 93 ntBASIC-1.13□□□□□ -2.59
HIST1H3AP68431 SNORA26.6-201ENST00000391256 115 ntBASIC-1.13□□□□□ -2.59
HIST1H3AP68431 Y_RNA.594-201ENST00000410373 140 ntBASIC-1.13□□□□□ -2.59
HIST1H3AP68431 RNA5SP261-201ENST00000410536 106 ntBASIC-1.13□□□□□ -2.59
HIST1H3AP68431 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.13□□□□□ -2.59
HIST1H3AP68431 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-1.13□□□□□ -2.59
HIST1H3AP68431 RNA5SP484-201ENST00000458857 111 ntBASIC-1.13□□□□□ -2.59
HIST1H3AP68431 RNU7-45P-201ENST00000459460 63 ntBASIC-1.13□□□□□ -2.59
HIST1H3AP68431 AC074198.2-201ENST00000508153 258 ntBASIC-1.13□□□□□ -2.59
HIST1H3AP68431 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.13□□□□□ -2.59
HIST1H3AP68431 RNU6-693P-201ENST00000516134 107 ntBASIC-1.13□□□□□ -2.59
HIST1H3AP68431 Y_RNA.704-201ENST00000516851 102 ntBASIC-1.13□□□□□ -2.59
HIST1H3AP68431 AC092794.2-201ENST00000620933 563 ntBASIC-1.13□□□□□ -2.59
HIST1H3AP68431 MIR302B-201ENST00000362188 73 ntBASIC-1.14□□□□□ -2.59
HIST1H3AP68431 Y_RNA.295-201ENST00000364918 102 ntBASIC-1.14□□□□□ -2.59
HIST1H3AP68431 SNORD78.2-201ENST00000391076 69 ntBASIC-1.14□□□□□ -2.59
HIST1H3AP68431 RNU6-908P-201ENST00000410160 94 ntBASIC-1.14□□□□□ -2.59
HIST1H3AP68431 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.14□□□□□ -2.59
HIST1H3AP68431 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-1.14□□□□□ -2.59
HIST1H3AP68431 AL359880.1-201ENST00000621879 266 ntBASIC-1.14□□□□□ -2.59
HIST1H3AP68431 RNU6-865P-201ENST00000364772 107 ntBASIC-1.15□□□□□ -2.59
HIST1H3AP68431 RNU6-483P-201ENST00000384088 108 ntBASIC-1.15□□□□□ -2.59
HIST1H3AP68431 RNU6-1013P-201ENST00000384180 107 ntBASIC-1.15□□□□□ -2.59
HIST1H3AP68431 RNU6-35P-201ENST00000384530 107 ntBASIC-1.15□□□□□ -2.59
HIST1H3AP68431 RNY1P7-201ENST00000384743 110 ntBASIC-1.15□□□□□ -2.59
HIST1H3AP68431 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.15□□□□□ -2.59
HIST1H3AP68431 AC021146.6-201ENST00000514659 117 ntBASIC-1.15□□□□□ -2.59
HIST1H3AP68431 RNU6-531P-201ENST00000516694 104 ntBASIC-1.15□□□□□ -2.59
HIST1H3AP68431 MIR4790-201ENST00000577799 79 ntBASIC-1.15□□□□□ -2.59
HIST1H3AP68431 AL356055.1-201ENST00000602528 446 ntBASIC-1.15□□□□□ -2.59
HIST1H3AP68431 AL360085.1-201ENST00000604713 532 ntBASIC-1.15□□□□□ -2.59
HIST1H3AP68431 RNU6-451P-201ENST00000362921 107 ntBASIC-1.16□□□□□ -2.6
HIST1H3AP68431 RNU4-58P-201ENST00000363192 141 ntBASIC-1.16□□□□□ -2.6
HIST1H3AP68431 SNORD114-25-201ENST00000363742 72 ntBASIC-1.16□□□□□ -2.6
HIST1H3AP68431 MIR626-201ENST00000385032 94 ntBASIC-1.16□□□□□ -2.6
HIST1H3AP68431 SNORA69.1-201ENST00000390904 137 ntBASIC-1.16□□□□□ -2.6
HIST1H3AP68431 SNORD41.1-201ENST00000391000 69 ntBASIC-1.16□□□□□ -2.6
HIST1H3AP68431 RNU6-1050P-201ENST00000410388 107 ntBASIC-1.16□□□□□ -2.6
HIST1H3AP68431 AC244505.6-201ENST00000452829 130 ntBASIC-1.16□□□□□ -2.6
HIST1H3AP68431 RNU6-881P-201ENST00000516813 102 ntBASIC-1.16□□□□□ -2.6
HIST1H3AP68431 RNU2-31P-201ENST00000516954 155 ntBASIC-1.16□□□□□ -2.6
HIST1H3AP68431 AC093424.1-201ENST00000604999 338 ntBASIC-1.16□□□□□ -2.6
HIST1H3AP68431 RNU6-86P-201ENST00000606534 107 ntBASIC-1.16□□□□□ -2.6
HIST1H3AP68431 RNU6-702P-201ENST00000364982 107 ntBASIC-1.17□□□□□ -2.6
HIST1H3AP68431 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.17□□□□□ -2.6
HIST1H3AP68431 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.17□□□□□ -2.6
HIST1H3AP68431 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.17□□□□□ -2.6
HIST1H3AP68431 RNU6-1016P-201ENST00000516689 94 ntBASIC-1.17□□□□□ -2.6
HIST1H3AP68431 MIR4659A-201ENST00000580269 81 ntBASIC-1.17□□□□□ -2.6
HIST1H3AP68431 DLEU2_1.1-201ENST00000612089 120 ntBASIC-1.17□□□□□ -2.6
HIST1H3AP68431 DLEU2_1.2-201ENST00000614667 120 ntBASIC-1.17□□□□□ -2.6
HIST1H3AP68431 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.17□□□□□ -2.6
HIST1H3AP68431 RNU6-99P-201ENST00000364721 107 ntBASIC-1.18□□□□□ -2.6
HIST1H3AP68431 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.18□□□□□ -2.6
HIST1H3AP68431 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.18□□□□□ -2.6
HIST1H3AP68431 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.18□□□□□ -2.6
HIST1H3AP68431 RNU6-780P-201ENST00000391030 104 ntBASIC-1.18□□□□□ -2.6
HIST1H3AP68431 Y_RNA.592-201ENST00000410274 109 ntBASIC-1.18□□□□□ -2.6
HIST1H3AP68431 SNORD38.3-201ENST00000516599 73 ntBASIC-1.18□□□□□ -2.6
HIST1H3AP68431 AP001328.1-201ENST00000528550 176 ntBASIC-1.18□□□□□ -2.6
HIST1H3AP68431 MIR4423-201ENST00000580922 80 ntBASIC-1.18□□□□□ -2.6
HIST1H3AP68431 MIR4473-201ENST00000583731 91 ntBASIC-1.18□□□□□ -2.6
HIST1H3AP68431 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.18□□□□□ -2.6
HIST1H3AP68431 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-1.18□□□□□ -2.6
HIST1H3AP68431 AC090617.10-201ENST00000624308 134 ntBASIC-1.18□□□□□ -2.6
HIST1H3AP68431 RNY3P3-201ENST00000363816 102 ntBASIC-1.19□□□□□ -2.6
HIST1H3AP68431 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.19□□□□□ -2.6
HIST1H3AP68431 Y_RNA.359-201ENST00000365498 102 ntBASIC-1.19□□□□□ -2.6
HIST1H3AP68431 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.19□□□□□ -2.6
HIST1H3AP68431 RNY3P4-201ENST00000384428 101 ntBASIC-1.19□□□□□ -2.6
HIST1H3AP68431 MIR9-2-201ENST00000384838 87 ntBASIC-1.19□□□□□ -2.6
HIST1H3AP68431 MIR1265-201ENST00000408444 86 ntBASIC-1.19□□□□□ -2.6
HIST1H3AP68431 RNU2-14P-201ENST00000411053 191 ntBASIC-1.19□□□□□ -2.6
HIST1H3AP68431 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.19□□□□□ -2.6
HIST1H3AP68431 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.19□□□□□ -2.6
HIST1H3AP68431 MIR3145-201ENST00000580727 82 ntBASIC-1.19□□□□□ -2.6
HIST1H3AP68431 AL049861.1-201ENST00000603130 150 ntBASIC-1.19□□□□□ -2.6
HIST1H3AP68431 AC124864.2-201ENST00000624736 186 ntBASIC-1.19□□□□□ -2.6
HIST1H3AP68431 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.2□□□□□ -2.6
HIST1H3AP68431 RNU6-509P-201ENST00000363519 107 ntBASIC-1.2□□□□□ -2.6
HIST1H3AP68431 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.2□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms