Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC015688.6-201ENST00000577737 104 ntBASIC2.03□□□□□ -2.08
GFRA1P56159 AL627230.6-201ENST00000611129 280 ntBASIC2.03□□□□□ -2.08
GFRA1P56159 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
GFRA1P56159 AC092881.1-201ENST00000638218 2733 ntBASIC2.02□□□□□ -2.09
GFRA1P56159 Y_RNA.81-201ENST00000362997 102 ntBASIC2.02□□□□□ -2.09
GFRA1P56159 SNORD116-21-201ENST00000384507 92 ntBASIC2.02□□□□□ -2.09
GFRA1P56159 MIR221-201ENST00000385135 110 ntBASIC2.02□□□□□ -2.09
GFRA1P56159 AL022718.1-201ENST00000412004 84 ntBASIC2.02□□□□□ -2.09
GFRA1P56159 AL035461.1-201ENST00000421490 332 ntBASIC2.02□□□□□ -2.09
GFRA1P56159 snoU13.16-201ENST00000459350 104 ntBASIC2.02□□□□□ -2.09
GFRA1P56159 RNU7-123P-201ENST00000515911 60 ntBASIC2.02□□□□□ -2.09
GFRA1P56159 AL513534.2-201ENST00000603836 250 ntBASIC2.02□□□□□ -2.09
GFRA1P56159 WWP1P1-201ENST00000466609 2769 ntBASIC2.02□□□□□ -2.09
GFRA1P56159 AL596028.1-201ENST00000326971 197 ntBASIC2.01□□□□□ -2.09
GFRA1P56159 Y_RNA.198-201ENST00000364013 98 ntBASIC2.01□□□□□ -2.09
GFRA1P56159 RNU6-429P-201ENST00000384582 108 ntBASIC2.01□□□□□ -2.09
GFRA1P56159 MIR548A1-201ENST00000385041 97 ntBASIC2.01□□□□□ -2.09
GFRA1P56159 MIR30A-201ENST00000385092 71 ntBASIC2.01□□□□□ -2.09
GFRA1P56159 RNU6-1319P-201ENST00000390855 104 ntBASIC2.01□□□□□ -2.09
GFRA1P56159 RNU6-747P-201ENST00000390928 104 ntBASIC2.01□□□□□ -2.09
GFRA1P56159 RNU6-241P-201ENST00000391148 104 ntBASIC2.01□□□□□ -2.09
GFRA1P56159 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.01□□□□□ -2.09
GFRA1P56159 RNU6-177P-201ENST00000411257 104 ntBASIC2.01□□□□□ -2.09
GFRA1P56159 snoU13.9-201ENST00000458927 103 ntBASIC2.01□□□□□ -2.09
GFRA1P56159 SNORD111.1-201ENST00000516421 86 ntBASIC2.01□□□□□ -2.09
GFRA1P56159 RNU6-922P-201ENST00000516753 99 ntBASIC2.01□□□□□ -2.09
GFRA1P56159 AL357312.1-201ENST00000603879 298 ntBASIC2.01□□□□□ -2.09
GFRA1P56159 AC103810.8-201ENST00000607347 118 ntBASIC2.01□□□□□ -2.09
GFRA1P56159 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.01□□□□□ -2.09
GFRA1P56159 AC009831.4-201ENST00000620744 325 ntBASIC2.01□□□□□ -2.09
GFRA1P56159 MIR8063-201ENST00000621930 81 ntBASIC2.01□□□□□ -2.09
GFRA1P56159 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.01□□□□□ -2.09
GFRA1P56159 U8.2-201ENST00000363156 134 ntBASIC2□□□□□ -2.09
GFRA1P56159 RNU6-880P-201ENST00000384526 107 ntBASIC2□□□□□ -2.09
GFRA1P56159 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2□□□□□ -2.09
GFRA1P56159 RNA5SP144-201ENST00000410846 116 ntBASIC2□□□□□ -2.09
GFRA1P56159 AL356379.1-201ENST00000414105 126 ntBASIC2□□□□□ -2.09
GFRA1P56159 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2□□□□□ -2.09
GFRA1P56159 RNU7-45P-201ENST00000459460 63 ntBASIC2□□□□□ -2.09
GFRA1P56159 SNORA31.4-201ENST00000516049 129 ntBASIC2□□□□□ -2.09
GFRA1P56159 RNA5SP200-201ENST00000516360 103 ntBASIC2□□□□□ -2.09
GFRA1P56159 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2□□□□□ -2.09
GFRA1P56159 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2□□□□□ -2.09
GFRA1P56159 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
GFRA1P56159 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2□□□□□ -2.09
GFRA1P56159 MIR144-201ENST00000384886 86 ntBASIC1.99□□□□□ -2.09
GFRA1P56159 HMGN2P19-201ENST00000425149 265 ntBASIC1.99□□□□□ -2.09
GFRA1P56159 RNU2-35P-201ENST00000516446 142 ntBASIC1.99□□□□□ -2.09
GFRA1P56159 AC121758.2-201ENST00000553271 193 ntBASIC1.99□□□□□ -2.09
GFRA1P56159 MIR5694-201ENST00000581190 76 ntBASIC1.99□□□□□ -2.09
GFRA1P56159 AL020996.3-201ENST00000606617 222 ntBASIC1.99□□□□□ -2.09
GFRA1P56159 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.99□□□□□ -2.09
GFRA1P56159 MIR6873-201ENST00000622788 63 ntBASIC1.99□□□□□ -2.09
GFRA1P56159 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.99□□□□□ -2.09
GFRA1P56159 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
GFRA1P56159 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
GFRA1P56159 RNU6-913P-201ENST00000390913 95 ntBASIC1.98□□□□□ -2.09
GFRA1P56159 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
GFRA1P56159 HSPE1P24-201ENST00000450782 238 ntBASIC1.98□□□□□ -2.09
GFRA1P56159 HMGN2P23-201ENST00000456759 269 ntBASIC1.98□□□□□ -2.09
GFRA1P56159 RPS27P21-201ENST00000486977 252 ntBASIC1.98□□□□□ -2.09
GFRA1P56159 Y_RNA.709-201ENST00000516952 92 ntBASIC1.98□□□□□ -2.09
GFRA1P56159 MIR4648-201ENST00000580107 72 ntBASIC1.98□□□□□ -2.09
GFRA1P56159 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.98□□□□□ -2.09
GFRA1P56159 MIR4251-201ENST00000635819 61 ntBASIC1.98□□□□□ -2.09
GFRA1P56159 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
GFRA1P56159 SNORD41-201ENST00000386967 70 ntBASIC1.97□□□□□ -2.09
GFRA1P56159 RNU6-589P-201ENST00000516485 107 ntBASIC1.97□□□□□ -2.09
GFRA1P56159 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.97□□□□□ -2.09
GFRA1P56159 GHRLOS.1-201ENST00000610995 70 ntBASIC1.97□□□□□ -2.09
GFRA1P56159 MIR6840-201ENST00000611937 71 ntBASIC1.97□□□□□ -2.09
GFRA1P56159 MIR6132-201ENST00000622083 109 ntBASIC1.97□□□□□ -2.09
GFRA1P56159 MIR6717-201ENST00000622747 73 ntBASIC1.97□□□□□ -2.09
GFRA1P56159 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
GFRA1P56159 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
GFRA1P56159 Y_RNA.35-201ENST00000362601 101 ntBASIC1.96□□□□□ -2.1
GFRA1P56159 SNORA22.1-201ENST00000362701 134 ntBASIC1.96□□□□□ -2.1
GFRA1P56159 RNY4P6-201ENST00000363667 96 ntBASIC1.96□□□□□ -2.1
GFRA1P56159 RNA5SP48-201ENST00000363969 126 ntBASIC1.96□□□□□ -2.1
GFRA1P56159 SNORA1.1-201ENST00000364671 133 ntBASIC1.96□□□□□ -2.1
GFRA1P56159 RNU6-44P-201ENST00000384045 107 ntBASIC1.96□□□□□ -2.1
GFRA1P56159 SNORA48.3-201ENST00000391081 134 ntBASIC1.96□□□□□ -2.1
GFRA1P56159 POLR2J4-204ENST00000418424 324 ntBASIC1.96□□□□□ -2.1
GFRA1P56159 RPL23AP42-201ENST00000471152 471 ntBASIC1.96□□□□□ -2.1
GFRA1P56159 AC007012.1-201ENST00000567192 175 ntBASIC1.96□□□□□ -2.1
GFRA1P56159 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.96□□□□□ -2.1
GFRA1P56159 SNORD33-201ENST00000362761 85 ntBASIC1.95□□□□□ -2.1
GFRA1P56159 Y_RNA.430-201ENST00000384081 110 ntBASIC1.95□□□□□ -2.1
GFRA1P56159 SNORA26.6-201ENST00000391256 115 ntBASIC1.95□□□□□ -2.1
GFRA1P56159 RNU6-1190P-201ENST00000410811 104 ntBASIC1.95□□□□□ -2.1
GFRA1P56159 RPS3AP1-201ENST00000413190 320 ntBASIC1.95□□□□□ -2.1
GFRA1P56159 RNU7-113P-201ENST00000459273 62 ntBASIC1.95□□□□□ -2.1
GFRA1P56159 AC005908.1-201ENST00000468701 347 ntBASIC1.95□□□□□ -2.1
GFRA1P56159 RNU7-41P-201ENST00000515917 61 ntBASIC1.95□□□□□ -2.1
GFRA1P56159 RNU6-412P-201ENST00000516434 106 ntBASIC1.95□□□□□ -2.1
GFRA1P56159 RNU6-250P-201ENST00000516958 103 ntBASIC1.95□□□□□ -2.1
GFRA1P56159 AC004812.1-201ENST00000540773 146 ntBASIC1.95□□□□□ -2.1
GFRA1P56159 MIR3198-2-201ENST00000577868 80 ntBASIC1.95□□□□□ -2.1
GFRA1P56159 MIR3163-201ENST00000581592 73 ntBASIC1.95□□□□□ -2.1
GFRA1P56159 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms