Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AL008718.3-201ENST00000610217 321 ntBASIC0.3□□□□□ -2.36
CDH4P55283 MIRLET7D-201ENST00000362263 87 ntBASIC0.29□□□□□ -2.36
CDH4P55283 Y_RNA.26-201ENST00000362539 101 ntBASIC0.29□□□□□ -2.36
CDH4P55283 RNU4-10P-201ENST00000364383 140 ntBASIC0.29□□□□□ -2.36
CDH4P55283 SNORD24-201ENST00000383884 75 ntBASIC0.29□□□□□ -2.36
CDH4P55283 Y_RNA.389-201ENST00000383924 113 ntBASIC0.29□□□□□ -2.36
CDH4P55283 Y_RNA.431-201ENST00000384086 102 ntBASIC0.29□□□□□ -2.36
CDH4P55283 SNORD61-201ENST00000384252 73 ntBASIC0.29□□□□□ -2.36
CDH4P55283 MIR526A2-201ENST00000390198 65 ntBASIC0.29□□□□□ -2.36
CDH4P55283 RNU6-101P-201ENST00000410323 104 ntBASIC0.29□□□□□ -2.36
CDH4P55283 RPL21P38-201ENST00000418090 167 ntBASIC0.29□□□□□ -2.36
CDH4P55283 HMGN1P33-201ENST00000432945 451 ntBASIC0.29□□□□□ -2.36
CDH4P55283 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.29□□□□□ -2.36
CDH4P55283 RNU6-693P-201ENST00000516134 107 ntBASIC0.29□□□□□ -2.36
CDH4P55283 SNORD36C-201ENST00000516733 66 ntBASIC0.29□□□□□ -2.36
CDH4P55283 MIR6779-201ENST00000617283 64 ntBASIC0.29□□□□□ -2.36
CDH4P55283 snoU18.1-201ENST00000629629 71 ntBASIC0.29□□□□□ -2.36
CDH4P55283 RNU6-770P-201ENST00000363929 105 ntBASIC0.28□□□□□ -2.36
CDH4P55283 Y_RNA.205-201ENST00000364128 113 ntBASIC0.28□□□□□ -2.36
CDH4P55283 SNORA63C-201ENST00000364578 129 ntBASIC0.28□□□□□ -2.36
CDH4P55283 Y_RNA.293-201ENST00000364908 93 ntBASIC0.28□□□□□ -2.36
CDH4P55283 RNU6-806P-201ENST00000365147 105 ntBASIC0.28□□□□□ -2.36
CDH4P55283 SNORA27-201ENST00000384323 126 ntBASIC0.28□□□□□ -2.36
CDH4P55283 SNORD38B-201ENST00000384690 67 ntBASIC0.28□□□□□ -2.36
CDH4P55283 RNU6-602P-201ENST00000411155 105 ntBASIC0.28□□□□□ -2.36
CDH4P55283 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
CDH4P55283 SNORA27.4-201ENST00000516650 95 ntBASIC0.28□□□□□ -2.36
CDH4P55283 Y_RNA.721-201ENST00000517207 102 ntBASIC0.28□□□□□ -2.36
CDH4P55283 AC008608.1-201ENST00000603910 127 ntBASIC0.28□□□□□ -2.36
CDH4P55283 SNORD38B-202ENST00000625943 69 ntBASIC0.28□□□□□ -2.36
CDH4P55283 AC010332.2-201ENST00000613083 1904 ntBASIC0.28□□□□□ -2.36
CDH4P55283 SNORA25.1-201ENST00000362326 128 ntBASIC0.27□□□□□ -2.37
CDH4P55283 RNU6-888P-201ENST00000363010 101 ntBASIC0.27□□□□□ -2.37
CDH4P55283 RNU4-45P-201ENST00000365469 141 ntBASIC0.27□□□□□ -2.37
CDH4P55283 Y_RNA.380-201ENST00000365663 111 ntBASIC0.27□□□□□ -2.37
CDH4P55283 Y_RNA.572-201ENST00000384757 98 ntBASIC0.27□□□□□ -2.37
CDH4P55283 MIR588-201ENST00000384900 83 ntBASIC0.27□□□□□ -2.37
CDH4P55283 RNU2-70P-201ENST00000410718 179 ntBASIC0.27□□□□□ -2.37
CDH4P55283 MTATP6P23-201ENST00000440153 476 ntBASIC0.27□□□□□ -2.37
CDH4P55283 MTND4LP30-201ENST00000454092 297 ntBASIC0.27□□□□□ -2.37
CDH4P55283 MIR18B-201ENST00000454574 71 ntBASIC0.27□□□□□ -2.37
CDH4P55283 snoU13.2-201ENST00000459201 104 ntBASIC0.27□□□□□ -2.37
CDH4P55283 RPS29P24-201ENST00000486345 171 ntBASIC0.27□□□□□ -2.37
CDH4P55283 MIR5688-201ENST00000580619 83 ntBASIC0.27□□□□□ -2.37
CDH4P55283 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
CDH4P55283 UBE2WP1-201ENST00000362030 340 ntBASIC0.26□□□□□ -2.37
CDH4P55283 Y_RNA.16-201ENST00000362421 102 ntBASIC0.26□□□□□ -2.37
CDH4P55283 Y_RNA.66-201ENST00000362862 102 ntBASIC0.26□□□□□ -2.37
CDH4P55283 Y_RNA.276-201ENST00000364732 109 ntBASIC0.26□□□□□ -2.37
CDH4P55283 MIR563-201ENST00000385080 79 ntBASIC0.26□□□□□ -2.37
CDH4P55283 MIR938-201ENST00000401216 83 ntBASIC0.26□□□□□ -2.37
CDH4P55283 SNORD100-201ENST00000408573 76 ntBASIC0.26□□□□□ -2.37
CDH4P55283 RNU6-1165P-201ENST00000410119 107 ntBASIC0.26□□□□□ -2.37
CDH4P55283 RNU6-1190P-201ENST00000410811 104 ntBASIC0.26□□□□□ -2.37
CDH4P55283 AF228730.3-201ENST00000436691 102 ntBASIC0.26□□□□□ -2.37
CDH4P55283 Y_RNA.631-201ENST00000459607 101 ntBASIC0.26□□□□□ -2.37
CDH4P55283 RNU7-53P-201ENST00000516705 60 ntBASIC0.26□□□□□ -2.37
CDH4P55283 RNU6-1270P-201ENST00000517128 108 ntBASIC0.26□□□□□ -2.37
CDH4P55283 AC100767.1-201ENST00000528178 123 ntBASIC0.26□□□□□ -2.37
CDH4P55283 MIR1273G-201ENST00000577677 100 ntBASIC0.26□□□□□ -2.37
CDH4P55283 Y_RNA.802-201ENST00000614892 130 ntBASIC0.26□□□□□ -2.37
CDH4P55283 AC092634.7-201ENST00000621022 103 ntBASIC0.26□□□□□ -2.37
CDH4P55283 AC090625.1-201ENST00000357130 210 ntBASIC0.25□□□□□ -2.37
CDH4P55283 Y_RNA.19-201ENST00000362462 99 ntBASIC0.25□□□□□ -2.37
CDH4P55283 Y_RNA.229-201ENST00000364347 113 ntBASIC0.25□□□□□ -2.37
CDH4P55283 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
CDH4P55283 SNORA22B-201ENST00000383876 138 ntBASIC0.25□□□□□ -2.37
CDH4P55283 MIR125B2-201ENST00000385128 89 ntBASIC0.25□□□□□ -2.37
CDH4P55283 SNORA53-201ENST00000391141 249 ntBASIC0.25□□□□□ -2.37
CDH4P55283 AC022028.1-201ENST00000412054 408 ntBASIC0.25□□□□□ -2.37
CDH4P55283 SNORA40.15-201ENST00000516884 107 ntBASIC0.25□□□□□ -2.37
CDH4P55283 AC131281.1-201ENST00000522984 164 ntBASIC0.25□□□□□ -2.37
CDH4P55283 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.25□□□□□ -2.37
CDH4P55283 AC090897.1-201ENST00000580909 226 ntBASIC0.25□□□□□ -2.37
CDH4P55283 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.25□□□□□ -2.37
CDH4P55283 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.25□□□□□ -2.37
CDH4P55283 AL160413.1-201ENST00000622780 310 ntBASIC0.25□□□□□ -2.37
CDH4P55283 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.25□□□□□ -2.37
CDH4P55283 MIR30D-201ENST00000362283 70 ntBASIC0.24□□□□□ -2.37
CDH4P55283 Y_RNA.24-201ENST00000362508 103 ntBASIC0.24□□□□□ -2.37
CDH4P55283 Y_RNA.64-201ENST00000362845 102 ntBASIC0.24□□□□□ -2.37
CDH4P55283 RNU6-1309P-201ENST00000363305 108 ntBASIC0.24□□□□□ -2.37
CDH4P55283 RNA5SP517-201ENST00000364724 117 ntBASIC0.24□□□□□ -2.37
CDH4P55283 RNU6-514P-201ENST00000384208 107 ntBASIC0.24□□□□□ -2.37
CDH4P55283 MIR626-201ENST00000385032 94 ntBASIC0.24□□□□□ -2.37
CDH4P55283 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.24□□□□□ -2.37
CDH4P55283 AL731563.1-201ENST00000442202 214 ntBASIC0.24□□□□□ -2.37
CDH4P55283 RNU7-102P-201ENST00000458948 62 ntBASIC0.24□□□□□ -2.37
CDH4P55283 RNU7-185P-201ENST00000459215 60 ntBASIC0.24□□□□□ -2.37
CDH4P55283 RNU6-998P-201ENST00000515894 101 ntBASIC0.24□□□□□ -2.37
CDH4P55283 RNY3P15-201ENST00000516297 97 ntBASIC0.24□□□□□ -2.37
CDH4P55283 RNU6-126P-201ENST00000516685 103 ntBASIC0.24□□□□□ -2.37
CDH4P55283 RNU6-365P-201ENST00000517113 106 ntBASIC0.24□□□□□ -2.37
CDH4P55283 RNU6-988P-201ENST00000519081 107 ntBASIC0.24□□□□□ -2.37
CDH4P55283 AP003733.2-201ENST00000529409 171 ntBASIC0.24□□□□□ -2.37
CDH4P55283 AC113195.1-201ENST00000579952 141 ntBASIC0.24□□□□□ -2.37
CDH4P55283 SNORD92-201ENST00000585078 85 ntBASIC0.24□□□□□ -2.37
CDH4P55283 AC037487.3-201ENST00000606668 112 ntBASIC0.24□□□□□ -2.37
CDH4P55283 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.23□□□□□ -2.37
CDH4P55283 MIR103A1-201ENST00000362165 78 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms