Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 7SK.13-201ENST00000622040 250 ntBASIC1.17□□□□□ -2.22
LIMK2P53671 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
LIMK2P53671 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.16□□□□□ -2.22
LIMK2P53671 RNU6-199P-201ENST00000362954 107 ntBASIC1.16□□□□□ -2.22
LIMK2P53671 RNU6-1336P-201ENST00000383886 109 ntBASIC1.16□□□□□ -2.22
LIMK2P53671 SNORA1-201ENST00000384107 130 ntBASIC1.16□□□□□ -2.22
LIMK2P53671 RNU6-125P-201ENST00000384505 107 ntBASIC1.16□□□□□ -2.22
LIMK2P53671 Y_RNA.547-201ENST00000384654 119 ntBASIC1.16□□□□□ -2.22
LIMK2P53671 MIR526A1-201ENST00000384897 85 ntBASIC1.16□□□□□ -2.22
LIMK2P53671 MIR548O-201ENST00000408583 114 ntBASIC1.16□□□□□ -2.22
LIMK2P53671 MIR1285-1-201ENST00000408593 84 ntBASIC1.16□□□□□ -2.22
LIMK2P53671 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.16□□□□□ -2.22
LIMK2P53671 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.16□□□□□ -2.22
LIMK2P53671 RNU6-693P-201ENST00000516134 107 ntBASIC1.16□□□□□ -2.22
LIMK2P53671 AC090142.3-201ENST00000519012 385 ntBASIC1.16□□□□□ -2.22
LIMK2P53671 DNAJC19P2-201ENST00000593340 302 ntBASIC1.16□□□□□ -2.22
LIMK2P53671 Y_RNA.778-201ENST00000620203 90 ntBASIC1.16□□□□□ -2.22
LIMK2P53671 AC106754.2-201ENST00000623006 233 ntBASIC1.16□□□□□ -2.22
LIMK2P53671 RNU6-774P-201ENST00000363238 107 ntBASIC1.15□□□□□ -2.23
LIMK2P53671 RNU6-151P-201ENST00000364158 107 ntBASIC1.15□□□□□ -2.23
LIMK2P53671 RNU6-1082P-201ENST00000364574 107 ntBASIC1.15□□□□□ -2.23
LIMK2P53671 MIR452-201ENST00000385020 85 ntBASIC1.15□□□□□ -2.23
LIMK2P53671 MIR516B2-201ENST00000385190 85 ntBASIC1.15□□□□□ -2.23
LIMK2P53671 MIR653-201ENST00000385279 96 ntBASIC1.15□□□□□ -2.23
LIMK2P53671 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
LIMK2P53671 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.15□□□□□ -2.23
LIMK2P53671 AL365205.2-201ENST00000594586 68 ntBASIC1.15□□□□□ -2.23
LIMK2P53671 MIR7111-201ENST00000619751 72 ntBASIC1.15□□□□□ -2.23
LIMK2P53671 MTND1P7-201ENST00000632801 297 ntBASIC1.15□□□□□ -2.23
LIMK2P53671 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.15□□□□□ -2.23
LIMK2P53671 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
LIMK2P53671 MIR96-201ENST00000362288 78 ntBASIC1.14□□□□□ -2.23
LIMK2P53671 RNY1P11-201ENST00000363759 113 ntBASIC1.14□□□□□ -2.23
LIMK2P53671 SNORA25.7-201ENST00000364375 127 ntBASIC1.14□□□□□ -2.23
LIMK2P53671 RNU4-11P-201ENST00000365287 132 ntBASIC1.14□□□□□ -2.23
LIMK2P53671 SNORD114-22-201ENST00000365423 72 ntBASIC1.14□□□□□ -2.23
LIMK2P53671 RNY1P5-201ENST00000383890 115 ntBASIC1.14□□□□□ -2.23
LIMK2P53671 Y_RNA.400-201ENST00000383963 111 ntBASIC1.14□□□□□ -2.23
LIMK2P53671 RNU6-746P-201ENST00000384112 109 ntBASIC1.14□□□□□ -2.23
LIMK2P53671 SNORD38C-201ENST00000384381 69 ntBASIC1.14□□□□□ -2.23
LIMK2P53671 SNORA75.5-201ENST00000391291 81 ntBASIC1.14□□□□□ -2.23
LIMK2P53671 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.14□□□□□ -2.23
LIMK2P53671 RNU6-346P-201ENST00000516288 111 ntBASIC1.14□□□□□ -2.23
LIMK2P53671 RNU6-917P-201ENST00000516294 104 ntBASIC1.14□□□□□ -2.23
LIMK2P53671 RNU6-830P-201ENST00000516353 107 ntBASIC1.14□□□□□ -2.23
LIMK2P53671 AC019288.1-201ENST00000557918 224 ntBASIC1.14□□□□□ -2.23
LIMK2P53671 MIR3646-201ENST00000578301 84 ntBASIC1.14□□□□□ -2.23
LIMK2P53671 MIR3129-201ENST00000581095 76 ntBASIC1.14□□□□□ -2.23
LIMK2P53671 MIR3133-201ENST00000583157 78 ntBASIC1.14□□□□□ -2.23
LIMK2P53671 AC015726.2-201ENST00000620112 122 ntBASIC1.14□□□□□ -2.23
LIMK2P53671 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.14□□□□□ -2.23
LIMK2P53671 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
LIMK2P53671 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
LIMK2P53671 Y_RNA.118-201ENST00000363300 101 ntBASIC1.13□□□□□ -2.23
LIMK2P53671 Y_RNA.542-201ENST00000384641 111 ntBASIC1.13□□□□□ -2.23
LIMK2P53671 MIR618-201ENST00000385287 98 ntBASIC1.13□□□□□ -2.23
LIMK2P53671 SNORD77.3-201ENST00000391113 65 ntBASIC1.13□□□□□ -2.23
LIMK2P53671 AL603908.1-201ENST00000406098 201 ntBASIC1.13□□□□□ -2.23
LIMK2P53671 RNU6-588P-201ENST00000410281 105 ntBASIC1.13□□□□□ -2.23
LIMK2P53671 RNU6-938P-201ENST00000411285 103 ntBASIC1.13□□□□□ -2.23
LIMK2P53671 AF228730.3-201ENST00000436691 102 ntBASIC1.13□□□□□ -2.23
LIMK2P53671 RNU4-57P-201ENST00000515980 135 ntBASIC1.13□□□□□ -2.23
LIMK2P53671 RNU6-165P-201ENST00000517170 99 ntBASIC1.13□□□□□ -2.23
LIMK2P53671 AC090049.2-201ENST00000550377 109 ntBASIC1.13□□□□□ -2.23
LIMK2P53671 SNORA4-201ENST00000584302 138 ntBASIC1.13□□□□□ -2.23
LIMK2P53671 GHRLOS.1-201ENST00000610995 70 ntBASIC1.13□□□□□ -2.23
LIMK2P53671 MIR376A2-201ENST00000636782 80 ntBASIC1.13□□□□□ -2.23
LIMK2P53671 MIR6844-201ENST00000637122 62 ntBASIC1.13□□□□□ -2.23
LIMK2P53671 RNA5SP327-201ENST00000362494 101 ntBASIC1.12□□□□□ -2.23
LIMK2P53671 SNORD115-28-201ENST00000363931 81 ntBASIC1.12□□□□□ -2.23
LIMK2P53671 Y_RNA.215-201ENST00000364204 112 ntBASIC1.12□□□□□ -2.23
LIMK2P53671 SNORA2.2-201ENST00000365473 135 ntBASIC1.12□□□□□ -2.23
LIMK2P53671 RNU6-1292P-201ENST00000383856 107 ntBASIC1.12□□□□□ -2.23
LIMK2P53671 RNU6-939P-201ENST00000384634 107 ntBASIC1.12□□□□□ -2.23
LIMK2P53671 MIR136-201ENST00000385207 82 ntBASIC1.12□□□□□ -2.23
LIMK2P53671 MIR569-201ENST00000385228 96 ntBASIC1.12□□□□□ -2.23
LIMK2P53671 SNORD37.2-201ENST00000391075 66 ntBASIC1.12□□□□□ -2.23
LIMK2P53671 MIR548M-201ENST00000408260 86 ntBASIC1.12□□□□□ -2.23
LIMK2P53671 RNU7-197P-201ENST00000458836 62 ntBASIC1.12□□□□□ -2.23
LIMK2P53671 RNU6-322P-201ENST00000516010 103 ntBASIC1.12□□□□□ -2.23
LIMK2P53671 RNU6-922P-201ENST00000516753 99 ntBASIC1.12□□□□□ -2.23
LIMK2P53671 Y_RNA.703-201ENST00000516846 111 ntBASIC1.12□□□□□ -2.23
LIMK2P53671 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
LIMK2P53671 Y_RNA.37-201ENST00000362606 108 ntBASIC1.11□□□□□ -2.23
LIMK2P53671 RNU1-93P-201ENST00000364704 169 ntBASIC1.11□□□□□ -2.23
LIMK2P53671 RNU6-187P-201ENST00000384139 106 ntBASIC1.11□□□□□ -2.23
LIMK2P53671 MIR624-201ENST00000385217 97 ntBASIC1.11□□□□□ -2.23
LIMK2P53671 AL451046.2-201ENST00000403074 277 ntBASIC1.11□□□□□ -2.23
LIMK2P53671 AC087343.1-201ENST00000477341 475 ntBASIC1.11□□□□□ -2.23
LIMK2P53671 SNORD36C-201ENST00000516733 66 ntBASIC1.11□□□□□ -2.23
LIMK2P53671 AC112693.2-201ENST00000556538 232 ntBASIC1.11□□□□□ -2.23
LIMK2P53671 MIR4295-201ENST00000585286 85 ntBASIC1.11□□□□□ -2.23
LIMK2P53671 FAM106DP-201ENST00000586416 501 ntBASIC1.11□□□□□ -2.23
LIMK2P53671 AC134878.1-201ENST00000619901 243 ntBASIC1.11□□□□□ -2.23
LIMK2P53671 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
LIMK2P53671 Y_RNA.251-201ENST00000364551 99 ntBASIC1.1□□□□□ -2.23
LIMK2P53671 SNORA25.8-201ENST00000364831 128 ntBASIC1.1□□□□□ -2.23
LIMK2P53671 SNORA70.7-201ENST00000384159 133 ntBASIC1.1□□□□□ -2.23
LIMK2P53671 Y_RNA.497-201ENST00000384447 98 ntBASIC1.1□□□□□ -2.23
LIMK2P53671 SNORD41-201ENST00000386967 70 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms