Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC024933.1-201ENST00000608472 348 ntBASIC-0.91□□□□□ -2.55
NUP98P52948 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.91□□□□□ -2.55
NUP98P52948 MIR148A-201ENST00000362215 68 ntBASIC-0.92□□□□□ -2.56
NUP98P52948 RNU4-58P-201ENST00000363192 141 ntBASIC-0.92□□□□□ -2.56
NUP98P52948 RNU4-16P-201ENST00000364737 141 ntBASIC-0.92□□□□□ -2.56
NUP98P52948 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.92□□□□□ -2.56
NUP98P52948 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.92□□□□□ -2.56
NUP98P52948 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.92□□□□□ -2.56
NUP98P52948 RNU6-966P-201ENST00000516479 104 ntBASIC-0.92□□□□□ -2.56
NUP98P52948 RNU7-53P-201ENST00000516705 60 ntBASIC-0.92□□□□□ -2.56
NUP98P52948 RNA5SP66-201ENST00000517178 101 ntBASIC-0.92□□□□□ -2.56
NUP98P52948 AL356055.1-201ENST00000602528 446 ntBASIC-0.92□□□□□ -2.56
NUP98P52948 uc_338.10-201ENST00000621872 182 ntBASIC-0.92□□□□□ -2.56
NUP98P52948 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.92□□□□□ -2.56
NUP98P52948 AL445567.1-201ENST00000439121 144 ntBASIC-0.92□□□□□ -2.56
NUP98P52948 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.92□□□□□ -2.56
NUP98P52948 RNU6-155P-201ENST00000516347 100 ntBASIC-0.92□□□□□ -2.56
NUP98P52948 RNU6-1088P-201ENST00000516850 104 ntBASIC-0.92□□□□□ -2.56
NUP98P52948 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.93□□□□□ -2.56
NUP98P52948 RNU6-1085P-201ENST00000363576 107 ntBASIC-0.93□□□□□ -2.56
NUP98P52948 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.93□□□□□ -2.56
NUP98P52948 RNU6-926P-201ENST00000384075 107 ntBASIC-0.93□□□□□ -2.56
NUP98P52948 MIR204-201ENST00000385200 110 ntBASIC-0.93□□□□□ -2.56
NUP98P52948 MT-TY-201ENST00000387409 66 ntBASIC-0.93□□□□□ -2.56
NUP98P52948 AF228730.4-201ENST00000421457 183 ntBASIC-0.93□□□□□ -2.56
NUP98P52948 SEPT14P3-201ENST00000439401 183 ntBASIC-0.93□□□□□ -2.56
NUP98P52948 AL732372.2-207ENST00000445840 183 ntBASIC-0.93□□□□□ -2.56
NUP98P52948 SEPT14P2-201ENST00000453405 183 ntBASIC-0.93□□□□□ -2.56
NUP98P52948 SEPT14P4-201ENST00000513445 186 ntBASIC-0.93□□□□□ -2.56
NUP98P52948 AC021146.6-201ENST00000514659 117 ntBASIC-0.93□□□□□ -2.56
NUP98P52948 FO082796.1-201ENST00000523795 183 ntBASIC-0.93□□□□□ -2.56
NUP98P52948 AC127455.1-201ENST00000565496 145 ntBASIC-0.93□□□□□ -2.56
NUP98P52948 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.93□□□□□ -2.56
NUP98P52948 MIR6128-201ENST00000615528 109 ntBASIC-0.93□□□□□ -2.56
NUP98P52948 MIR302B-201ENST00000362188 73 ntBASIC-0.94□□□□□ -2.56
NUP98P52948 SNORD114-25-201ENST00000363742 72 ntBASIC-0.94□□□□□ -2.56
NUP98P52948 RNU4-36P-201ENST00000364294 144 ntBASIC-0.94□□□□□ -2.56
NUP98P52948 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.94□□□□□ -2.56
NUP98P52948 AC096949.1-201ENST00000412047 152 ntBASIC-0.94□□□□□ -2.56
NUP98P52948 AC091951.2-201ENST00000500762 203 ntBASIC-0.94□□□□□ -2.56
NUP98P52948 RNA5SP461-201ENST00000516451 104 ntBASIC-0.94□□□□□ -2.56
NUP98P52948 Y_RNA.682-201ENST00000516457 100 ntBASIC-0.94□□□□□ -2.56
NUP98P52948 RNU6-706P-201ENST00000517229 104 ntBASIC-0.94□□□□□ -2.56
NUP98P52948 MTATP6P24-201ENST00000576835 677 ntBASIC-0.94□□□□□ -2.56
NUP98P52948 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.94□□□□□ -2.56
NUP98P52948 SNORA69.1-201ENST00000390904 137 ntBASIC-0.94□□□□□ -2.56
NUP98P52948 MIR548I3-201ENST00000408378 149 ntBASIC-0.94□□□□□ -2.56
NUP98P52948 MIR1278-201ENST00000408753 81 ntBASIC-0.94□□□□□ -2.56
NUP98P52948 SNORA36B-201ENST00000410438 131 ntBASIC-0.94□□□□□ -2.56
NUP98P52948 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.94□□□□□ -2.56
NUP98P52948 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.94□□□□□ -2.56
NUP98P52948 BX276092.1-201ENST00000427368 251 ntBASIC-0.94□□□□□ -2.56
NUP98P52948 RNU6-998P-201ENST00000515894 101 ntBASIC-0.94□□□□□ -2.56
NUP98P52948 AC005899.2-201ENST00000584353 90 ntBASIC-0.94□□□□□ -2.56
NUP98P52948 AC092794.2-201ENST00000620933 563 ntBASIC-0.94□□□□□ -2.56
NUP98P52948 Y_RNA.409-201ENST00000383990 98 ntBASIC-0.95□□□□□ -2.56
NUP98P52948 Y_RNA.414-201ENST00000384011 101 ntBASIC-0.95□□□□□ -2.56
NUP98P52948 SNORA26.6-201ENST00000391256 115 ntBASIC-0.95□□□□□ -2.56
NUP98P52948 MIR876-201ENST00000401147 81 ntBASIC-0.95□□□□□ -2.56
NUP98P52948 MIR1285-2-201ENST00000408311 88 ntBASIC-0.95□□□□□ -2.56
NUP98P52948 RNA5SP261-201ENST00000410536 106 ntBASIC-0.95□□□□□ -2.56
NUP98P52948 AL365203.2-201ENST00000423444 196 ntBASIC-0.95□□□□□ -2.56
NUP98P52948 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.95□□□□□ -2.56
NUP98P52948 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-0.95□□□□□ -2.56
NUP98P52948 RNU7-161P-201ENST00000517289 62 ntBASIC-0.95□□□□□ -2.56
NUP98P52948 MIR548AY-201ENST00000617669 107 ntBASIC-0.95□□□□□ -2.56
NUP98P52948 RNU6-874P-201ENST00000362390 105 ntBASIC-0.96□□□□□ -2.56
NUP98P52948 SNORD115-2-201ENST00000362842 82 ntBASIC-0.96□□□□□ -2.56
NUP98P52948 RNA5SP245-201ENST00000364239 121 ntBASIC-0.96□□□□□ -2.56
NUP98P52948 RNU6-708P-201ENST00000384217 107 ntBASIC-0.96□□□□□ -2.56
NUP98P52948 SNORA72.6-201ENST00000384520 129 ntBASIC-0.96□□□□□ -2.56
NUP98P52948 AC024067.1-201ENST00000426199 223 ntBASIC-0.96□□□□□ -2.56
NUP98P52948 RN7SKP298-201ENST00000515950 94 ntBASIC-0.96□□□□□ -2.56
NUP98P52948 MIR5701-3-201ENST00000578890 82 ntBASIC-0.96□□□□□ -2.56
NUP98P52948 MIR5701-1-201ENST00000585138 82 ntBASIC-0.96□□□□□ -2.56
NUP98P52948 MIR5701-2-201ENST00000615634 82 ntBASIC-0.96□□□□□ -2.56
NUP98P52948 RNU6-801P-201ENST00000364087 105 ntBASIC-0.96□□□□□ -2.56
NUP98P52948 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.96□□□□□ -2.56
NUP98P52948 RNU6-20P-201ENST00000384106 107 ntBASIC-0.96□□□□□ -2.56
NUP98P52948 MTND4P28-201ENST00000426217 387 ntBASIC-0.96□□□□□ -2.56
NUP98P52948 RNA5SP470-201ENST00000516463 106 ntBASIC-0.96□□□□□ -2.56
NUP98P52948 AC040926.1-201ENST00000530195 238 ntBASIC-0.96□□□□□ -2.56
NUP98P52948 MIR3115-201ENST00000577915 68 ntBASIC-0.96□□□□□ -2.56
NUP98P52948 MIR4280-201ENST00000582178 76 ntBASIC-0.96□□□□□ -2.56
NUP98P52948 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.96□□□□□ -2.56
NUP98P52948 AC122108.2-201ENST00000611946 526 ntBASIC-0.96□□□□□ -2.56
NUP98P52948 MIR342-201ENST00000362212 99 ntBASIC-0.97□□□□□ -2.56
NUP98P52948 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.97□□□□□ -2.56
NUP98P52948 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.97□□□□□ -2.56
NUP98P52948 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.97□□□□□ -2.56
NUP98P52948 RNY3P4-201ENST00000384428 101 ntBASIC-0.97□□□□□ -2.56
NUP98P52948 RNU6-306P-201ENST00000384617 107 ntBASIC-0.97□□□□□ -2.56
NUP98P52948 RNU6-291P-201ENST00000384720 107 ntBASIC-0.97□□□□□ -2.56
NUP98P52948 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.97□□□□□ -2.56
NUP98P52948 MIR2053-201ENST00000459295 91 ntBASIC-0.97□□□□□ -2.56
NUP98P52948 MIR4441-201ENST00000582623 100 ntBASIC-0.97□□□□□ -2.56
NUP98P52948 AC005014.3-201ENST00000605985 190 ntBASIC-0.97□□□□□ -2.56
NUP98P52948 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.98□□□□□ -2.57
NUP98P52948 SNORA1-201ENST00000384107 130 ntBASIC-0.98□□□□□ -2.57
NUP98P52948 Y_RNA.559-201ENST00000384686 107 ntBASIC-0.98□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms