Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 MIR570-201ENST00000384917 97 ntBASIC0.61□□□□□ -2.31
GPC3P51654 MIR626-201ENST00000385032 94 ntBASIC0.61□□□□□ -2.31
GPC3P51654 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
GPC3P51654 RNA5SP193-201ENST00000410353 107 ntBASIC0.61□□□□□ -2.31
GPC3P51654 AC098934.3-201ENST00000430450 190 ntBASIC0.61□□□□□ -2.31
GPC3P51654 RNU7-67P-201ENST00000459003 62 ntBASIC0.61□□□□□ -2.31
GPC3P51654 RNU4-54P-201ENST00000516428 129 ntBASIC0.61□□□□□ -2.31
GPC3P51654 AC100767.1-201ENST00000528178 123 ntBASIC0.61□□□□□ -2.31
GPC3P51654 AP003484.1-201ENST00000530974 250 ntBASIC0.61□□□□□ -2.31
GPC3P51654 MIR4711-201ENST00000578274 70 ntBASIC0.61□□□□□ -2.31
GPC3P51654 MIR548AO-201ENST00000579992 96 ntBASIC0.61□□□□□ -2.31
GPC3P51654 AC134878.1-201ENST00000619901 243 ntBASIC0.61□□□□□ -2.31
GPC3P51654 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.6□□□□□ -2.31
GPC3P51654 Y_RNA.16-201ENST00000362421 102 ntBASIC0.6□□□□□ -2.31
GPC3P51654 SNORD114-26-201ENST00000363543 72 ntBASIC0.6□□□□□ -2.31
GPC3P51654 RNU6-1335P-201ENST00000365426 107 ntBASIC0.6□□□□□ -2.31
GPC3P51654 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
GPC3P51654 Y_RNA.486-201ENST00000384398 107 ntBASIC0.6□□□□□ -2.31
GPC3P51654 MIR216A-201ENST00000385063 110 ntBASIC0.6□□□□□ -2.31
GPC3P51654 MIR1827-201ENST00000408549 66 ntBASIC0.6□□□□□ -2.31
GPC3P51654 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.6□□□□□ -2.31
GPC3P51654 RNU6-693P-201ENST00000516134 107 ntBASIC0.6□□□□□ -2.31
GPC3P51654 Y_RNA.666-201ENST00000516187 112 ntBASIC0.6□□□□□ -2.31
GPC3P51654 RNU6-1299P-201ENST00000516316 100 ntBASIC0.6□□□□□ -2.31
GPC3P51654 RNA5SP153-201ENST00000516498 76 ntBASIC0.6□□□□□ -2.31
GPC3P51654 SCARNA24.2-201ENST00000516968 130 ntBASIC0.6□□□□□ -2.31
GPC3P51654 RNU6-1137P-201ENST00000517073 99 ntBASIC0.6□□□□□ -2.31
GPC3P51654 RN7SL793P-201ENST00000583259 296 ntBASIC0.6□□□□□ -2.31
GPC3P51654 AP000942.4-201ENST00000604811 241 ntBASIC0.6□□□□□ -2.31
GPC3P51654 Y_RNA.82-201ENST00000363000 102 ntBASIC0.59□□□□□ -2.31
GPC3P51654 RNU6-888P-201ENST00000363010 101 ntBASIC0.59□□□□□ -2.31
GPC3P51654 Y_RNA.92-201ENST00000363043 102 ntBASIC0.59□□□□□ -2.31
GPC3P51654 RNU6-654P-201ENST00000364373 107 ntBASIC0.59□□□□□ -2.31
GPC3P51654 Y_RNA.235-201ENST00000364412 102 ntBASIC0.59□□□□□ -2.31
GPC3P51654 Y_RNA.306-201ENST00000365015 102 ntBASIC0.59□□□□□ -2.31
GPC3P51654 Y_RNA.312-201ENST00000365089 102 ntBASIC0.59□□□□□ -2.31
GPC3P51654 Y_RNA.322-201ENST00000365151 102 ntBASIC0.59□□□□□ -2.31
GPC3P51654 RNU6-580P-201ENST00000365159 107 ntBASIC0.59□□□□□ -2.31
GPC3P51654 RNU7-73P-201ENST00000458743 63 ntBASIC0.59□□□□□ -2.31
GPC3P51654 Y_RNA.650-201ENST00000459002 102 ntBASIC0.59□□□□□ -2.31
GPC3P51654 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.59□□□□□ -2.31
GPC3P51654 Y_RNA.777-201ENST00000516982 102 ntBASIC0.59□□□□□ -2.31
GPC3P51654 AC018659.1-201ENST00000551083 169 ntBASIC0.59□□□□□ -2.31
GPC3P51654 Y_RNA.771-201ENST00000598668 102 ntBASIC0.59□□□□□ -2.31
GPC3P51654 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.59□□□□□ -2.31
GPC3P51654 Y_RNA.789-201ENST00000622480 102 ntBASIC0.59□□□□□ -2.31
GPC3P51654 Y_RNA.24-201ENST00000362508 103 ntBASIC0.58□□□□□ -2.32
GPC3P51654 Y_RNA.26-201ENST00000362539 101 ntBASIC0.58□□□□□ -2.32
GPC3P51654 Y_RNA.37-201ENST00000362606 108 ntBASIC0.58□□□□□ -2.32
GPC3P51654 Y_RNA.229-201ENST00000364347 113 ntBASIC0.58□□□□□ -2.32
GPC3P51654 Y_RNA.410-201ENST00000383992 113 ntBASIC0.58□□□□□ -2.32
GPC3P51654 MIR1302-6-201ENST00000408466 90 ntBASIC0.58□□□□□ -2.32
GPC3P51654 RNU6-570P-201ENST00000517051 105 ntBASIC0.58□□□□□ -2.32
GPC3P51654 RNU6-94P-201ENST00000607728 107 ntBASIC0.58□□□□□ -2.32
GPC3P51654 U2.14-201ENST00000615943 113 ntBASIC0.58□□□□□ -2.32
GPC3P51654 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
GPC3P51654 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
GPC3P51654 Y_RNA.36-201ENST00000362602 112 ntBASIC0.57□□□□□ -2.32
GPC3P51654 SNORA63-201ENST00000363450 132 ntBASIC0.57□□□□□ -2.32
GPC3P51654 Y_RNA.432-201ENST00000384087 111 ntBASIC0.57□□□□□ -2.32
GPC3P51654 SNORA27-201ENST00000384323 126 ntBASIC0.57□□□□□ -2.32
GPC3P51654 SNORD38B-201ENST00000384690 67 ntBASIC0.57□□□□□ -2.32
GPC3P51654 RNU6-1228P-201ENST00000391014 107 ntBASIC0.57□□□□□ -2.32
GPC3P51654 RNU2-70P-201ENST00000410718 179 ntBASIC0.57□□□□□ -2.32
GPC3P51654 SNORD2.1-201ENST00000458762 69 ntBASIC0.57□□□□□ -2.32
GPC3P51654 RPS29P24-201ENST00000486345 171 ntBASIC0.57□□□□□ -2.32
GPC3P51654 RNU6-229P-201ENST00000516614 102 ntBASIC0.57□□□□□ -2.32
GPC3P51654 AC012433.1-201ENST00000588916 398 ntBASIC0.57□□□□□ -2.32
GPC3P51654 AC243829.3-201ENST00000622177 108 ntBASIC0.57□□□□□ -2.32
GPC3P51654 SNORD38B-202ENST00000625943 69 ntBASIC0.57□□□□□ -2.32
GPC3P51654 MIR518F-201ENST00000384973 87 ntBASIC0.56□□□□□ -2.32
GPC3P51654 SNORD105-201ENST00000386910 85 ntBASIC0.56□□□□□ -2.32
GPC3P51654 Y_RNA.590-201ENST00000410140 107 ntBASIC0.56□□□□□ -2.32
GPC3P51654 MTND5P22-201ENST00000458380 195 ntBASIC0.56□□□□□ -2.32
GPC3P51654 RNU7-96P-201ENST00000459535 64 ntBASIC0.56□□□□□ -2.32
GPC3P51654 Y_RNA.679-201ENST00000516416 91 ntBASIC0.56□□□□□ -2.32
GPC3P51654 RNU6-635P-201ENST00000516651 102 ntBASIC0.56□□□□□ -2.32
GPC3P51654 RNU6-958P-201ENST00000516995 106 ntBASIC0.56□□□□□ -2.32
GPC3P51654 Y_RNA.720-201ENST00000517166 92 ntBASIC0.56□□□□□ -2.32
GPC3P51654 AP001282.2-201ENST00000616149 309 ntBASIC0.56□□□□□ -2.32
GPC3P51654 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
GPC3P51654 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.56□□□□□ -2.32
GPC3P51654 Y_RNA.237-201ENST00000364439 102 ntBASIC0.55□□□□□ -2.32
GPC3P51654 SNORD61-201ENST00000384252 73 ntBASIC0.55□□□□□ -2.32
GPC3P51654 RNY1P4-201ENST00000384595 115 ntBASIC0.55□□□□□ -2.32
GPC3P51654 MIR7-2-201ENST00000384970 110 ntBASIC0.55□□□□□ -2.32
GPC3P51654 MIR616-201ENST00000385293 97 ntBASIC0.55□□□□□ -2.32
GPC3P51654 RNU1-119P-201ENST00000391122 165 ntBASIC0.55□□□□□ -2.32
GPC3P51654 SNORA79-201ENST00000408376 140 ntBASIC0.55□□□□□ -2.32
GPC3P51654 RNA5SP261-201ENST00000410536 106 ntBASIC0.55□□□□□ -2.32
GPC3P51654 SNORA18.4-201ENST00000516440 124 ntBASIC0.55□□□□□ -2.32
GPC3P51654 AC007751.1-201ENST00000529260 376 ntBASIC0.55□□□□□ -2.32
GPC3P51654 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.55□□□□□ -2.32
GPC3P51654 AC011195.1-201ENST00000578177 177 ntBASIC0.55□□□□□ -2.32
GPC3P51654 AC097639.2-201ENST00000603159 172 ntBASIC0.55□□□□□ -2.32
GPC3P51654 MIR8062-201ENST00000621515 85 ntBASIC0.55□□□□□ -2.32
GPC3P51654 Y_RNA.176-201ENST00000363815 109 ntBASIC0.54□□□□□ -2.32
GPC3P51654 RNU4-10P-201ENST00000364383 140 ntBASIC0.54□□□□□ -2.32
GPC3P51654 RNU6-740P-201ENST00000364734 105 ntBASIC0.54□□□□□ -2.32
GPC3P51654 RNU6-934P-201ENST00000365154 107 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 179.8 ms