Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 SNORD3E-202ENST00000627253 216 ntBASIC1.29□□□□□ -2.2
CLK1P49759 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CLK1P49759 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
CLK1P49759 AL157777.2-201ENST00000258070 137 ntBASIC1.28□□□□□ -2.2
CLK1P49759 Y_RNA.52-201ENST00000362760 96 ntBASIC1.28□□□□□ -2.2
CLK1P49759 SNORD113-1-201ENST00000365321 69 ntBASIC1.28□□□□□ -2.2
CLK1P49759 Y_RNA.343-201ENST00000365354 112 ntBASIC1.28□□□□□ -2.2
CLK1P49759 Y_RNA.420-201ENST00000384043 110 ntBASIC1.28□□□□□ -2.2
CLK1P49759 SNORA25-201ENST00000384384 134 ntBASIC1.28□□□□□ -2.2
CLK1P49759 SNORA20-201ENST00000384662 132 ntBASIC1.28□□□□□ -2.2
CLK1P49759 MIR513C-201ENST00000401352 84 ntBASIC1.28□□□□□ -2.2
CLK1P49759 RNA5SP127-201ENST00000411051 133 ntBASIC1.28□□□□□ -2.2
CLK1P49759 MTND4LP9-201ENST00000427694 174 ntBASIC1.28□□□□□ -2.2
CLK1P49759 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.28□□□□□ -2.2
CLK1P49759 RNA5SP404-201ENST00000517118 132 ntBASIC1.28□□□□□ -2.2
CLK1P49759 AL645939.4-201ENST00000604495 135 ntBASIC1.28□□□□□ -2.2
CLK1P49759 AC015726.2-201ENST00000620112 122 ntBASIC1.28□□□□□ -2.2
CLK1P49759 AC010332.2-201ENST00000613083 1904 ntBASIC1.28□□□□□ -2.2
CLK1P49759 ZNF209P-201ENST00000593450 2304 ntBASIC1.28□□□□□ -2.2
CLK1P49759 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
CLK1P49759 Y_RNA.37-201ENST00000362606 108 ntBASIC1.27□□□□□ -2.21
CLK1P49759 SNORD115-28-201ENST00000363931 81 ntBASIC1.27□□□□□ -2.21
CLK1P49759 RNU6-457P-201ENST00000363999 107 ntBASIC1.27□□□□□ -2.21
CLK1P49759 RNU6-81P-201ENST00000365608 104 ntBASIC1.27□□□□□ -2.21
CLK1P49759 MIR222-201ENST00000384992 110 ntBASIC1.27□□□□□ -2.21
CLK1P49759 MIR452-201ENST00000385020 85 ntBASIC1.27□□□□□ -2.21
CLK1P49759 MIR516B2-201ENST00000385190 85 ntBASIC1.27□□□□□ -2.21
CLK1P49759 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.27□□□□□ -2.21
CLK1P49759 RNA5SP236-201ENST00000516169 116 ntBASIC1.27□□□□□ -2.21
CLK1P49759 SNORD36C-201ENST00000516733 66 ntBASIC1.27□□□□□ -2.21
CLK1P49759 SCARNA15-202ENST00000516881 127 ntBASIC1.27□□□□□ -2.21
CLK1P49759 MIR5197-201ENST00000583721 112 ntBASIC1.27□□□□□ -2.21
CLK1P49759 AC131055.1-201ENST00000584626 316 ntBASIC1.27□□□□□ -2.21
CLK1P49759 HSPE1P19-201ENST00000603327 295 ntBASIC1.27□□□□□ -2.21
CLK1P49759 AL512598.1-201ENST00000610158 273 ntBASIC1.27□□□□□ -2.21
CLK1P49759 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.27□□□□□ -2.21
CLK1P49759 SNORD38C-201ENST00000384381 69 ntBASIC1.26□□□□□ -2.21
CLK1P49759 MIR758-201ENST00000390227 88 ntBASIC1.26□□□□□ -2.21
CLK1P49759 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
CLK1P49759 OR2A41P-201ENST00000473586 105 ntBASIC1.26□□□□□ -2.21
CLK1P49759 RNU6-917P-201ENST00000516294 104 ntBASIC1.26□□□□□ -2.21
CLK1P49759 Y_RNA.686-201ENST00000516548 134 ntBASIC1.26□□□□□ -2.21
CLK1P49759 RNU6-789P-201ENST00000517105 102 ntBASIC1.26□□□□□ -2.21
CLK1P49759 AL022345.2-201ENST00000606307 135 ntBASIC1.26□□□□□ -2.21
CLK1P49759 AC134878.1-201ENST00000619901 243 ntBASIC1.26□□□□□ -2.21
CLK1P49759 AP001340.1-201ENST00000624405 217 ntBASIC1.26□□□□□ -2.21
CLK1P49759 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
CLK1P49759 RNU6-508P-201ENST00000363231 103 ntBASIC1.25□□□□□ -2.21
CLK1P49759 Y_RNA.410-201ENST00000383992 113 ntBASIC1.25□□□□□ -2.21
CLK1P49759 Y_RNA.584-201ENST00000391090 114 ntBASIC1.25□□□□□ -2.21
CLK1P49759 SNORA18.4-201ENST00000516440 124 ntBASIC1.25□□□□□ -2.21
CLK1P49759 SUMO2P16-201ENST00000519475 264 ntBASIC1.25□□□□□ -2.21
CLK1P49759 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.25□□□□□ -2.21
CLK1P49759 MIR4303-201ENST00000581299 66 ntBASIC1.25□□□□□ -2.21
CLK1P49759 AC132825.6-201ENST00000638861 357 ntBASIC1.25□□□□□ -2.21
CLK1P49759 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
CLK1P49759 MTND5P32-201ENST00000560711 1802 ntBASIC1.24□□□□□ -2.21
CLK1P49759 Y_RNA.120-201ENST00000363304 110 ntBASIC1.24□□□□□ -2.21
CLK1P49759 Y_RNA.280-201ENST00000364765 112 ntBASIC1.24□□□□□ -2.21
CLK1P49759 RNU6-915P-201ENST00000364943 103 ntBASIC1.24□□□□□ -2.21
CLK1P49759 Y_RNA.440-201ENST00000384120 114 ntBASIC1.24□□□□□ -2.21
CLK1P49759 Y_RNA.494-201ENST00000384432 111 ntBASIC1.24□□□□□ -2.21
CLK1P49759 MIR653-201ENST00000385279 96 ntBASIC1.24□□□□□ -2.21
CLK1P49759 SNORA40-201ENST00000388090 126 ntBASIC1.24□□□□□ -2.21
CLK1P49759 MRPL35P3-201ENST00000421557 364 ntBASIC1.24□□□□□ -2.21
CLK1P49759 AC087499.4-201ENST00000448505 178 ntBASIC1.24□□□□□ -2.21
CLK1P49759 UBL5P1-201ENST00000507979 193 ntBASIC1.24□□□□□ -2.21
CLK1P49759 RNU6-1149P-201ENST00000516810 97 ntBASIC1.24□□□□□ -2.21
CLK1P49759 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.24□□□□□ -2.21
CLK1P49759 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.24□□□□□ -2.21
CLK1P49759 RNU1-124P-201ENST00000363861 145 ntBASIC1.23□□□□□ -2.21
CLK1P49759 RNU6-1189P-201ENST00000383958 107 ntBASIC1.23□□□□□ -2.21
CLK1P49759 MIR136-201ENST00000385207 82 ntBASIC1.23□□□□□ -2.21
CLK1P49759 SNORD28B-201ENST00000390993 75 ntBASIC1.23□□□□□ -2.21
CLK1P49759 U8.17-201ENST00000391292 132 ntBASIC1.23□□□□□ -2.21
CLK1P49759 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.23□□□□□ -2.21
CLK1P49759 Y_RNA.651-201ENST00000459380 103 ntBASIC1.23□□□□□ -2.21
CLK1P49759 RN7SKP179-201ENST00000516126 217 ntBASIC1.23□□□□□ -2.21
CLK1P49759 RNU7-181P-201ENST00000517234 74 ntBASIC1.23□□□□□ -2.21
CLK1P49759 AP003484.1-201ENST00000530974 250 ntBASIC1.23□□□□□ -2.21
CLK1P49759 AC106754.2-201ENST00000623006 233 ntBASIC1.23□□□□□ -2.21
CLK1P49759 AC027335.2-201ENST00000624030 375 ntBASIC1.23□□□□□ -2.21
CLK1P49759 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.23□□□□□ -2.21
CLK1P49759 U2.22-201ENST00000636441 106 ntBASIC1.23□□□□□ -2.21
CLK1P49759 SNORA19-201ENST00000384737 128 ntBASIC1.22□□□□□ -2.21
CLK1P49759 SNORA17.3-201ENST00000391159 129 ntBASIC1.22□□□□□ -2.21
CLK1P49759 AL603914.1-201ENST00000401964 204 ntBASIC1.22□□□□□ -2.21
CLK1P49759 SNORD123-201ENST00000459473 70 ntBASIC1.22□□□□□ -2.21
CLK1P49759 RPS26P48-201ENST00000491713 339 ntBASIC1.22□□□□□ -2.21
CLK1P49759 RNU2-13P-201ENST00000515909 113 ntBASIC1.22□□□□□ -2.21
CLK1P49759 SNORA31.4-201ENST00000516049 129 ntBASIC1.22□□□□□ -2.21
CLK1P49759 AP001328.1-201ENST00000528550 176 ntBASIC1.22□□□□□ -2.21
CLK1P49759 U7.2-201ENST00000607576 63 ntBASIC1.22□□□□□ -2.21
CLK1P49759 AC091895.1-201ENST00000624494 256 ntBASIC1.22□□□□□ -2.21
CLK1P49759 SNORD115-34-201ENST00000362441 82 ntBASIC1.21□□□□□ -2.22
CLK1P49759 SNORD115-12-201ENST00000362583 82 ntBASIC1.21□□□□□ -2.22
CLK1P49759 SNORD115-29-201ENST00000362834 82 ntBASIC1.21□□□□□ -2.22
CLK1P49759 SNORD115-9-201ENST00000362912 82 ntBASIC1.21□□□□□ -2.22
CLK1P49759 SNORD115-21-201ENST00000362963 81 ntBASIC1.21□□□□□ -2.22
CLK1P49759 SNORD115-14-201ENST00000363090 81 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms