Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 RNU7-181P-201ENST00000517234 74 ntBASIC1.63□□□□□ -2.15
THBS3P49746 RNU6-537P-201ENST00000517277 103 ntBASIC1.63□□□□□ -2.15
THBS3P49746 MIR4305-201ENST00000583252 102 ntBASIC1.63□□□□□ -2.15
THBS3P49746 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.63□□□□□ -2.15
THBS3P49746 AL096840.1-201ENST00000603287 93 ntBASIC1.63□□□□□ -2.15
THBS3P49746 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
THBS3P49746 AL442644.1-201ENST00000454390 3105 ntBASIC1.63□□□□□ -2.15
THBS3P49746 Y_RNA.328-201ENST00000365208 113 ntBASIC1.62□□□□□ -2.15
THBS3P49746 RNU6-1014P-201ENST00000383940 103 ntBASIC1.62□□□□□ -2.15
THBS3P49746 RNU6-756P-201ENST00000383997 107 ntBASIC1.62□□□□□ -2.15
THBS3P49746 SNORA27-201ENST00000384323 126 ntBASIC1.62□□□□□ -2.15
THBS3P49746 AL627390.1-201ENST00000396055 340 ntBASIC1.62□□□□□ -2.15
THBS3P49746 AL034345.1-201ENST00000407768 123 ntBASIC1.62□□□□□ -2.15
THBS3P49746 AL591806.2-201ENST00000433122 173 ntBASIC1.62□□□□□ -2.15
THBS3P49746 AC069257.2-201ENST00000441819 155 ntBASIC1.62□□□□□ -2.15
THBS3P49746 RNA5SP437-201ENST00000517249 129 ntBASIC1.62□□□□□ -2.15
THBS3P49746 AC090821.2-201ENST00000523552 176 ntBASIC1.62□□□□□ -2.15
THBS3P49746 MIR5582-201ENST00000579697 68 ntBASIC1.62□□□□□ -2.15
THBS3P49746 AC078899.2-201ENST00000595282 212 ntBASIC1.62□□□□□ -2.15
THBS3P49746 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.62□□□□□ -2.15
THBS3P49746 AC106754.2-201ENST00000623006 233 ntBASIC1.62□□□□□ -2.15
THBS3P49746 AL589743.1-201ENST00000551932 2712 ntBASIC1.62□□□□□ -2.15
THBS3P49746 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
THBS3P49746 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
THBS3P49746 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.62□□□□□ -2.15
THBS3P49746 RNU6-766P-201ENST00000362478 107 ntBASIC1.61□□□□□ -2.15
THBS3P49746 RNU6-833P-201ENST00000363486 107 ntBASIC1.61□□□□□ -2.15
THBS3P49746 RNY4P6-201ENST00000363667 96 ntBASIC1.61□□□□□ -2.15
THBS3P49746 Y_RNA.323-201ENST00000365157 109 ntBASIC1.61□□□□□ -2.15
THBS3P49746 Y_RNA.344-201ENST00000365381 112 ntBASIC1.61□□□□□ -2.15
THBS3P49746 SNORA51.5-201ENST00000384126 131 ntBASIC1.61□□□□□ -2.15
THBS3P49746 SNORA51.10-201ENST00000384418 136 ntBASIC1.61□□□□□ -2.15
THBS3P49746 RNU6-1031P-201ENST00000384773 107 ntBASIC1.61□□□□□ -2.15
THBS3P49746 MIR516B2-201ENST00000385190 85 ntBASIC1.61□□□□□ -2.15
THBS3P49746 MIR676-201ENST00000390702 67 ntBASIC1.61□□□□□ -2.15
THBS3P49746 HMGN2P39-201ENST00000398005 273 ntBASIC1.61□□□□□ -2.15
THBS3P49746 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.61□□□□□ -2.15
THBS3P49746 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.61□□□□□ -2.15
THBS3P49746 AC093850.1-201ENST00000454121 251 ntBASIC1.61□□□□□ -2.15
THBS3P49746 RPL23AP42-201ENST00000471152 471 ntBASIC1.61□□□□□ -2.15
THBS3P49746 AC055731.1-201ENST00000474387 401 ntBASIC1.61□□□□□ -2.15
THBS3P49746 RNU7-12P-201ENST00000516030 62 ntBASIC1.61□□□□□ -2.15
THBS3P49746 Y_RNA.694-201ENST00000516677 117 ntBASIC1.61□□□□□ -2.15
THBS3P49746 MIR4769-201ENST00000584126 77 ntBASIC1.61□□□□□ -2.15
THBS3P49746 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.61□□□□□ -2.15
THBS3P49746 Y_RNA.783-201ENST00000613546 102 ntBASIC1.61□□□□□ -2.15
THBS3P49746 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
THBS3P49746 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
THBS3P49746 Y_RNA.49-201ENST00000362714 112 ntBASIC1.6□□□□□ -2.15
THBS3P49746 U8.6-201ENST00000364939 135 ntBASIC1.6□□□□□ -2.15
THBS3P49746 Y_RNA.348-201ENST00000365403 103 ntBASIC1.6□□□□□ -2.15
THBS3P49746 Y_RNA.454-201ENST00000384224 113 ntBASIC1.6□□□□□ -2.15
THBS3P49746 RNU6-905P-201ENST00000384434 107 ntBASIC1.6□□□□□ -2.15
THBS3P49746 SNORA48.1-201ENST00000390879 135 ntBASIC1.6□□□□□ -2.15
THBS3P49746 RNA5SP465-201ENST00000391195 109 ntBASIC1.6□□□□□ -2.15
THBS3P49746 MIR1302-5-201ENST00000408164 150 ntBASIC1.6□□□□□ -2.15
THBS3P49746 RNY4P30-201ENST00000410216 95 ntBASIC1.6□□□□□ -2.15
THBS3P49746 RNA5SP501-201ENST00000410990 112 ntBASIC1.6□□□□□ -2.15
THBS3P49746 RPL23AP63-201ENST00000498752 471 ntBASIC1.6□□□□□ -2.15
THBS3P49746 AC108210.2-201ENST00000503681 201 ntBASIC1.6□□□□□ -2.15
THBS3P49746 RNU6-998P-201ENST00000515894 101 ntBASIC1.6□□□□□ -2.15
THBS3P49746 AC015712.3-201ENST00000559380 164 ntBASIC1.6□□□□□ -2.15
THBS3P49746 AC006254.2-201ENST00000603259 279 ntBASIC1.6□□□□□ -2.15
THBS3P49746 RNU6-94P-201ENST00000607728 107 ntBASIC1.6□□□□□ -2.15
THBS3P49746 SNORD115-34-201ENST00000362441 82 ntBASIC1.59□□□□□ -2.15
THBS3P49746 SNORD115-12-201ENST00000362583 82 ntBASIC1.59□□□□□ -2.15
THBS3P49746 SNORD115-29-201ENST00000362834 82 ntBASIC1.59□□□□□ -2.15
THBS3P49746 SNORD115-9-201ENST00000362912 82 ntBASIC1.59□□□□□ -2.15
THBS3P49746 SNORD115-21-201ENST00000362963 81 ntBASIC1.59□□□□□ -2.15
THBS3P49746 SNORD115-14-201ENST00000363090 81 ntBASIC1.59□□□□□ -2.15
THBS3P49746 SNORD115-13-201ENST00000363358 82 ntBASIC1.59□□□□□ -2.15
THBS3P49746 RNU6-112P-201ENST00000363599 104 ntBASIC1.59□□□□□ -2.15
THBS3P49746 SNORD115-41-201ENST00000363608 82 ntBASIC1.59□□□□□ -2.15
THBS3P49746 SNORD115-11-201ENST00000363616 82 ntBASIC1.59□□□□□ -2.15
THBS3P49746 SNORD115-5-201ENST00000363633 82 ntBASIC1.59□□□□□ -2.15
THBS3P49746 RNU6-640P-201ENST00000363693 105 ntBASIC1.59□□□□□ -2.15
THBS3P49746 SNORD115-39-201ENST00000363694 82 ntBASIC1.59□□□□□ -2.15
THBS3P49746 SNORD115-4-201ENST00000363810 82 ntBASIC1.59□□□□□ -2.15
THBS3P49746 SNORD115-16-201ENST00000363887 82 ntBASIC1.59□□□□□ -2.15
THBS3P49746 SNORD115-6-201ENST00000363942 82 ntBASIC1.59□□□□□ -2.15
THBS3P49746 SNORD115-42-201ENST00000364273 82 ntBASIC1.59□□□□□ -2.15
THBS3P49746 SNORD115-15-201ENST00000364809 81 ntBASIC1.59□□□□□ -2.15
THBS3P49746 SNORD115-1-201ENST00000364961 82 ntBASIC1.59□□□□□ -2.15
THBS3P49746 SNORD115-26-201ENST00000365067 82 ntBASIC1.59□□□□□ -2.15
THBS3P49746 SNORD115-10-201ENST00000365073 81 ntBASIC1.59□□□□□ -2.15
THBS3P49746 SNORD115-43-201ENST00000365503 82 ntBASIC1.59□□□□□ -2.15
THBS3P49746 SNORD115-36-201ENST00000365629 82 ntBASIC1.59□□□□□ -2.15
THBS3P49746 RNU6-296P-201ENST00000384608 107 ntBASIC1.59□□□□□ -2.15
THBS3P49746 RNU6-950P-201ENST00000384651 107 ntBASIC1.59□□□□□ -2.15
THBS3P49746 MIR520A-201ENST00000384862 85 ntBASIC1.59□□□□□ -2.15
THBS3P49746 MIR759-201ENST00000390224 91 ntBASIC1.59□□□□□ -2.15
THBS3P49746 MIR1267-201ENST00000408723 78 ntBASIC1.59□□□□□ -2.15
THBS3P49746 SNORA19.1-201ENST00000410656 129 ntBASIC1.59□□□□□ -2.15
THBS3P49746 RNU2-7P-201ENST00000410794 178 ntBASIC1.59□□□□□ -2.15
THBS3P49746 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.59□□□□□ -2.15
THBS3P49746 RNU7-34P-201ENST00000459394 64 ntBASIC1.59□□□□□ -2.15
THBS3P49746 SNORA31.25-201ENST00000517242 134 ntBASIC1.59□□□□□ -2.15
THBS3P49746 SUB1P4-201ENST00000566062 339 ntBASIC1.59□□□□□ -2.15
THBS3P49746 MIR5089-201ENST00000580047 84 ntBASIC1.59□□□□□ -2.15
THBS3P49746 MIR3683-201ENST00000580847 82 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 188 ms