Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC022140.2-201ENST00000623500 188 ntBASIC-1.35□□□□□ -2.63
SRP9P49458 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.36□□□□□ -2.63
SRP9P49458 Y_RNA.409-201ENST00000383990 98 ntBASIC-1.36□□□□□ -2.63
SRP9P49458 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.36□□□□□ -2.63
SRP9P49458 MIR9-2-201ENST00000384838 87 ntBASIC-1.36□□□□□ -2.63
SRP9P49458 SNORD83B-201ENST00000386745 93 ntBASIC-1.36□□□□□ -2.63
SRP9P49458 RNU6-1068P-201ENST00000410958 103 ntBASIC-1.36□□□□□ -2.63
SRP9P49458 RNU6-881P-201ENST00000516813 102 ntBASIC-1.36□□□□□ -2.63
SRP9P49458 MIR4528-201ENST00000577763 90 ntBASIC-1.36□□□□□ -2.63
SRP9P49458 RNU6-626P-201ENST00000363354 107 ntBASIC-1.37□□□□□ -2.63
SRP9P49458 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.37□□□□□ -2.63
SRP9P49458 MIR181B2-201ENST00000385004 89 ntBASIC-1.37□□□□□ -2.63
SRP9P49458 RNU6-693P-201ENST00000516134 107 ntBASIC-1.37□□□□□ -2.63
SRP9P49458 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.37□□□□□ -2.63
SRP9P49458 AC073648.5-201ENST00000603502 305 ntBASIC-1.37□□□□□ -2.63
SRP9P49458 MIR302B-201ENST00000362188 73 ntBASIC-1.38□□□□□ -2.63
SRP9P49458 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.38□□□□□ -2.63
SRP9P49458 RNA5SP133-201ENST00000363368 119 ntBASIC-1.38□□□□□ -2.63
SRP9P49458 Y_RNA.296-201ENST00000364930 108 ntBASIC-1.38□□□□□ -2.63
SRP9P49458 RNY1P13-201ENST00000365030 105 ntBASIC-1.38□□□□□ -2.63
SRP9P49458 SPINT5P-201ENST00000448174 155 ntBASIC-1.38□□□□□ -2.63
SRP9P49458 AC091951.2-201ENST00000500762 203 ntBASIC-1.38□□□□□ -2.63
SRP9P49458 AC022441.3-201ENST00000605737 136 ntBASIC-1.38□□□□□ -2.63
SRP9P49458 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.39□□□□□ -2.63
SRP9P49458 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.39□□□□□ -2.63
SRP9P49458 RNU6-901P-201ENST00000384593 106 ntBASIC-1.39□□□□□ -2.63
SRP9P49458 SNORD56B-201ENST00000384713 71 ntBASIC-1.39□□□□□ -2.63
SRP9P49458 RNA5SP261-201ENST00000410536 106 ntBASIC-1.39□□□□□ -2.63
SRP9P49458 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-1.39□□□□□ -2.63
SRP9P49458 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.39□□□□□ -2.63
SRP9P49458 SNORD38.3-201ENST00000516599 73 ntBASIC-1.39□□□□□ -2.63
SRP9P49458 RNU6-175P-201ENST00000516896 107 ntBASIC-1.39□□□□□ -2.63
SRP9P49458 RNU2-31P-201ENST00000516954 155 ntBASIC-1.39□□□□□ -2.63
SRP9P49458 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.39□□□□□ -2.63
SRP9P49458 AC087752.4-201ENST00000605911 462 ntBASIC-1.39□□□□□ -2.63
SRP9P49458 RNU6-86P-201ENST00000606534 107 ntBASIC-1.39□□□□□ -2.63
SRP9P49458 uc_338.10-201ENST00000621872 182 ntBASIC-1.39□□□□□ -2.63
SRP9P49458 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.4□□□□□ -2.63
SRP9P49458 AC023449.1-201ENST00000454464 154 ntBASIC-1.4□□□□□ -2.63
SRP9P49458 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-1.4□□□□□ -2.63
SRP9P49458 RNU6-273P-201ENST00000516937 96 ntBASIC-1.4□□□□□ -2.63
SRP9P49458 RNU1-54P-201ENST00000517181 120 ntBASIC-1.4□□□□□ -2.63
SRP9P49458 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.4□□□□□ -2.63
SRP9P49458 AC005357.1-201ENST00000588399 301 ntBASIC-1.4□□□□□ -2.63
SRP9P49458 SNORD114-25-201ENST00000363742 72 ntBASIC-1.41□□□□□ -2.64
SRP9P49458 Y_RNA.530-201ENST00000384587 101 ntBASIC-1.41□□□□□ -2.64
SRP9P49458 MIR548A2-201ENST00000384956 97 ntBASIC-1.41□□□□□ -2.64
SRP9P49458 RNU7-141P-201ENST00000459304 62 ntBASIC-1.41□□□□□ -2.64
SRP9P49458 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.41□□□□□ -2.64
SRP9P49458 SNORA27.4-201ENST00000516650 95 ntBASIC-1.41□□□□□ -2.64
SRP9P49458 MIR4280-201ENST00000582178 76 ntBASIC-1.41□□□□□ -2.64
SRP9P49458 DEFB117-201ENST00000602356 141 ntBASIC-1.41□□□□□ -2.64
SRP9P49458 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.41□□□□□ -2.64
SRP9P49458 MIR6128-201ENST00000615528 109 ntBASIC-1.41□□□□□ -2.64
SRP9P49458 U6.109-201ENST00000636749 87 ntBASIC-1.41□□□□□ -2.64
SRP9P49458 Y_RNA.473-201ENST00000384333 102 ntBASIC-1.42□□□□□ -2.64
SRP9P49458 SNORA18-201ENST00000384416 132 ntBASIC-1.42□□□□□ -2.64
SRP9P49458 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.42□□□□□ -2.64
SRP9P49458 MIR1244-1-201ENST00000612829 85 ntBASIC-1.42□□□□□ -2.64
SRP9P49458 MIR1244-3-201ENST00000635744 85 ntBASIC-1.42□□□□□ -2.64
SRP9P49458 MIR1244-2-201ENST00000636449 85 ntBASIC-1.42□□□□□ -2.64
SRP9P49458 MIR1244-4-202ENST00000636813 85 ntBASIC-1.42□□□□□ -2.64
SRP9P49458 MIR409-201ENST00000362237 79 ntBASIC-1.43□□□□□ -2.64
SRP9P49458 RNU4-36P-201ENST00000364294 144 ntBASIC-1.43□□□□□ -2.64
SRP9P49458 SNORD114-29-201ENST00000364819 70 ntBASIC-1.43□□□□□ -2.64
SRP9P49458 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.43□□□□□ -2.64
SRP9P49458 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.43□□□□□ -2.64
SRP9P49458 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.43□□□□□ -2.64
SRP9P49458 SNORD5.1-201ENST00000458800 75 ntBASIC-1.43□□□□□ -2.64
SRP9P49458 SNORD11.1-201ENST00000459482 85 ntBASIC-1.43□□□□□ -2.64
SRP9P49458 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.43□□□□□ -2.64
SRP9P49458 MIR3942-201ENST00000585264 109 ntBASIC-1.43□□□□□ -2.64
SRP9P49458 AC068137.3-201ENST00000639191 341 ntBASIC-1.43□□□□□ -2.64
SRP9P49458 RNU1-141P-201ENST00000364623 158 ntBASIC-1.44□□□□□ -2.64
SRP9P49458 MIR539-201ENST00000365690 78 ntBASIC-1.44□□□□□ -2.64
SRP9P49458 Y_RNA.414-201ENST00000384011 101 ntBASIC-1.44□□□□□ -2.64
SRP9P49458 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.44□□□□□ -2.64
SRP9P49458 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.44□□□□□ -2.64
SRP9P49458 RNU2-14P-201ENST00000411053 191 ntBASIC-1.44□□□□□ -2.64
SRP9P49458 MIR2355-201ENST00000517199 87 ntBASIC-1.44□□□□□ -2.64
SRP9P49458 RNY1P9-201ENST00000532431 109 ntBASIC-1.44□□□□□ -2.64
SRP9P49458 AP000676.1-201ENST00000533307 52 ntBASIC-1.44□□□□□ -2.64
SRP9P49458 AL049861.1-201ENST00000603130 150 ntBASIC-1.44□□□□□ -2.64
SRP9P49458 AC011476.5-201ENST00000615594 130 ntBASIC-1.44□□□□□ -2.64
SRP9P49458 SNORD61-201ENST00000384252 73 ntBASIC-1.45□□□□□ -2.64
SRP9P49458 MIR587-201ENST00000384845 96 ntBASIC-1.45□□□□□ -2.64
SRP9P49458 AF228730.3-201ENST00000436691 102 ntBASIC-1.45□□□□□ -2.64
SRP9P49458 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-1.45□□□□□ -2.64
SRP9P49458 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.45□□□□□ -2.64
SRP9P49458 SCARNA17-201ENST00000516183 144 ntBASIC-1.45□□□□□ -2.64
SRP9P49458 MIR6851-201ENST00000617060 67 ntBASIC-1.45□□□□□ -2.64
SRP9P49458 AC022960.3-201ENST00000619794 441 ntBASIC-1.45□□□□□ -2.64
SRP9P49458 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.46□□□□□ -2.64
SRP9P49458 MTND2P22-201ENST00000444325 1033 ntBASIC-1.46□□□□□ -2.64
SRP9P49458 MIR6738-201ENST00000619620 64 ntBASIC-1.46□□□□□ -2.64
SRP9P49458 Y_RNA.2-201ENST00000362330 96 ntBASIC-1.47□□□□□ -2.64
SRP9P49458 RNU6-900P-201ENST00000384498 102 ntBASIC-1.47□□□□□ -2.64
SRP9P49458 MIR599-201ENST00000385069 95 ntBASIC-1.47□□□□□ -2.64
SRP9P49458 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.47□□□□□ -2.64
SRP9P49458 SNORD115-47-201ENST00000391226 86 ntBASIC-1.47□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 198.2 ms