Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AC243994.1-201ENST00000618627 109 ntBASIC1.3□□□□□ -2.2
CENPAP49450 MIR4251-201ENST00000635819 61 ntBASIC1.3□□□□□ -2.2
CENPAP49450 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
CENPAP49450 MIR342-201ENST00000362212 99 ntBASIC1.29□□□□□ -2.2
CENPAP49450 Y_RNA.4-201ENST00000362333 112 ntBASIC1.29□□□□□ -2.2
CENPAP49450 RNA5SP48-201ENST00000363969 126 ntBASIC1.29□□□□□ -2.2
CENPAP49450 RNU4-84P-201ENST00000364200 139 ntBASIC1.29□□□□□ -2.2
CENPAP49450 Y_RNA.393-201ENST00000383936 102 ntBASIC1.29□□□□□ -2.2
CENPAP49450 SNORA27-201ENST00000384323 126 ntBASIC1.29□□□□□ -2.2
CENPAP49450 Y_RNA.494-201ENST00000384432 111 ntBASIC1.29□□□□□ -2.2
CENPAP49450 RNU6-768P-201ENST00000384683 107 ntBASIC1.29□□□□□ -2.2
CENPAP49450 RNU5E-9P-201ENST00000411164 104 ntBASIC1.29□□□□□ -2.2
CENPAP49450 AC048334.1-201ENST00000477975 159 ntBASIC1.29□□□□□ -2.2
CENPAP49450 RNU6-1053P-201ENST00000515930 101 ntBASIC1.29□□□□□ -2.2
CENPAP49450 SNORA31.2-201ENST00000516019 134 ntBASIC1.29□□□□□ -2.2
CENPAP49450 AC019288.1-201ENST00000557918 224 ntBASIC1.29□□□□□ -2.2
CENPAP49450 AL365205.2-201ENST00000594586 68 ntBASIC1.29□□□□□ -2.2
CENPAP49450 MIR4791-201ENST00000607666 84 ntBASIC1.29□□□□□ -2.2
CENPAP49450 AC098479.1-201ENST00000609225 154 ntBASIC1.29□□□□□ -2.2
CENPAP49450 FTX_2.1-201ENST00000618816 94 ntBASIC1.29□□□□□ -2.2
CENPAP49450 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.28□□□□□ -2.2
CENPAP49450 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CENPAP49450 RNU6-60P-201ENST00000364792 103 ntBASIC1.28□□□□□ -2.2
CENPAP49450 SNORA70.7-201ENST00000384159 133 ntBASIC1.28□□□□□ -2.2
CENPAP49450 Y_RNA.537-201ENST00000384626 109 ntBASIC1.28□□□□□ -2.2
CENPAP49450 SNORD37.2-201ENST00000391075 66 ntBASIC1.28□□□□□ -2.2
CENPAP49450 RNA5SP127-201ENST00000411051 133 ntBASIC1.28□□□□□ -2.2
CENPAP49450 RNA5SP247-201ENST00000411181 105 ntBASIC1.28□□□□□ -2.2
CENPAP49450 AL133373.1-201ENST00000497098 94 ntBASIC1.28□□□□□ -2.2
CENPAP49450 RNU6-958P-201ENST00000516995 106 ntBASIC1.28□□□□□ -2.2
CENPAP49450 RNU1-92P-201ENST00000517017 135 ntBASIC1.28□□□□□ -2.2
CENPAP49450 AC104465.1-201ENST00000611365 139 ntBASIC1.28□□□□□ -2.2
CENPAP49450 MIR6844-201ENST00000637122 62 ntBASIC1.28□□□□□ -2.2
CENPAP49450 SNORA25.3-201ENST00000363205 127 ntBASIC1.27□□□□□ -2.21
CENPAP49450 RNU6-1292P-201ENST00000383856 107 ntBASIC1.27□□□□□ -2.21
CENPAP49450 RNU6-1336P-201ENST00000383886 109 ntBASIC1.27□□□□□ -2.21
CENPAP49450 RNU6-907P-201ENST00000390924 102 ntBASIC1.27□□□□□ -2.21
CENPAP49450 SNORA17.3-201ENST00000391159 129 ntBASIC1.27□□□□□ -2.21
CENPAP49450 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.27□□□□□ -2.21
CENPAP49450 RPS29P29-201ENST00000456396 171 ntBASIC1.27□□□□□ -2.21
CENPAP49450 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.27□□□□□ -2.21
CENPAP49450 MIR378A-201ENST00000362177 66 ntBASIC1.26□□□□□ -2.21
CENPAP49450 Y_RNA.272-201ENST00000364696 102 ntBASIC1.26□□□□□ -2.21
CENPAP49450 RNU6-597P-201ENST00000365620 102 ntBASIC1.26□□□□□ -2.21
CENPAP49450 Y_RNA.440-201ENST00000384120 114 ntBASIC1.26□□□□□ -2.21
CENPAP49450 Y_RNA.441-201ENST00000384123 112 ntBASIC1.26□□□□□ -2.21
CENPAP49450 RNU6-886P-201ENST00000384319 105 ntBASIC1.26□□□□□ -2.21
CENPAP49450 AC245047.7-201ENST00000440265 293 ntBASIC1.26□□□□□ -2.21
CENPAP49450 RPS29P24-201ENST00000486345 171 ntBASIC1.26□□□□□ -2.21
CENPAP49450 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.26□□□□□ -2.21
CENPAP49450 SNORA31.4-201ENST00000516049 129 ntBASIC1.26□□□□□ -2.21
CENPAP49450 RNU7-70P-201ENST00000516941 66 ntBASIC1.26□□□□□ -2.21
CENPAP49450 AL645939.4-201ENST00000604495 135 ntBASIC1.26□□□□□ -2.21
CENPAP49450 MTND1P7-201ENST00000632801 297 ntBASIC1.26□□□□□ -2.21
CENPAP49450 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.26□□□□□ -2.21
CENPAP49450 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CENPAP49450 Y_RNA.351-201ENST00000365436 96 ntBASIC1.25□□□□□ -2.21
CENPAP49450 MIR758-201ENST00000390227 88 ntBASIC1.25□□□□□ -2.21
CENPAP49450 RNU6-1054P-201ENST00000411293 104 ntBASIC1.25□□□□□ -2.21
CENPAP49450 AC009474.2-201ENST00000451383 136 ntBASIC1.25□□□□□ -2.21
CENPAP49450 RNU2-13P-201ENST00000515909 113 ntBASIC1.25□□□□□ -2.21
CENPAP49450 RNA5SP61-201ENST00000516453 100 ntBASIC1.25□□□□□ -2.21
CENPAP49450 RNU7-53P-201ENST00000516705 60 ntBASIC1.25□□□□□ -2.21
CENPAP49450 DNAJC19P9-201ENST00000555084 351 ntBASIC1.25□□□□□ -2.21
CENPAP49450 MIR5197-201ENST00000583721 112 ntBASIC1.25□□□□□ -2.21
CENPAP49450 MIR103A2-201ENST00000362154 78 ntBASIC1.24□□□□□ -2.21
CENPAP49450 MIR302B-201ENST00000362188 73 ntBASIC1.24□□□□□ -2.21
CENPAP49450 Y_RNA.8-201ENST00000362353 102 ntBASIC1.24□□□□□ -2.21
CENPAP49450 MIR222-201ENST00000384992 110 ntBASIC1.24□□□□□ -2.21
CENPAP49450 MIR624-201ENST00000385217 97 ntBASIC1.24□□□□□ -2.21
CENPAP49450 RNU6-1135P-201ENST00000411083 103 ntBASIC1.24□□□□□ -2.21
CENPAP49450 AL035398.1-201ENST00000430869 322 ntBASIC1.24□□□□□ -2.21
CENPAP49450 snoU13.25-201ENST00000458945 104 ntBASIC1.24□□□□□ -2.21
CENPAP49450 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.24□□□□□ -2.21
CENPAP49450 DNAJC19P2-201ENST00000593340 302 ntBASIC1.24□□□□□ -2.21
CENPAP49450 MIR3658-201ENST00000636291 56 ntBASIC1.24□□□□□ -2.21
CENPAP49450 MIR376A2-201ENST00000636782 80 ntBASIC1.24□□□□□ -2.21
CENPAP49450 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CENPAP49450 RNA5SP264-201ENST00000363115 107 ntBASIC1.23□□□□□ -2.21
CENPAP49450 RNY1P10-201ENST00000363268 113 ntBASIC1.23□□□□□ -2.21
CENPAP49450 RNU6-1082P-201ENST00000364574 107 ntBASIC1.23□□□□□ -2.21
CENPAP49450 RNU6-818P-201ENST00000364837 108 ntBASIC1.23□□□□□ -2.21
CENPAP49450 Y_RNA.555-201ENST00000384673 110 ntBASIC1.23□□□□□ -2.21
CENPAP49450 RNU6-910P-201ENST00000390844 107 ntBASIC1.23□□□□□ -2.21
CENPAP49450 SNORA75.5-201ENST00000391291 81 ntBASIC1.23□□□□□ -2.21
CENPAP49450 RNU6-588P-201ENST00000410281 105 ntBASIC1.23□□□□□ -2.21
CENPAP49450 snoU13.16-201ENST00000459350 104 ntBASIC1.23□□□□□ -2.21
CENPAP49450 RNU7-96P-201ENST00000459535 64 ntBASIC1.23□□□□□ -2.21
CENPAP49450 RNU7-80P-201ENST00000459562 61 ntBASIC1.23□□□□□ -2.21
CENPAP49450 RNU7-121P-201ENST00000516604 62 ntBASIC1.23□□□□□ -2.21
CENPAP49450 SNORA70.22-201ENST00000517160 124 ntBASIC1.23□□□□□ -2.21
CENPAP49450 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.23□□□□□ -2.21
CENPAP49450 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.23□□□□□ -2.21
CENPAP49450 MIR337-201ENST00000362281 93 ntBASIC1.22□□□□□ -2.21
CENPAP49450 RNU6-449P-201ENST00000383914 107 ntBASIC1.22□□□□□ -2.21
CENPAP49450 SNORD116-18-201ENST00000383961 92 ntBASIC1.22□□□□□ -2.21
CENPAP49450 RNU6-804P-201ENST00000384286 107 ntBASIC1.22□□□□□ -2.21
CENPAP49450 RNU6-321P-201ENST00000410912 106 ntBASIC1.22□□□□□ -2.21
CENPAP49450 AP1B1P2-201ENST00000416196 106 ntBASIC1.22□□□□□ -2.21
CENPAP49450 BTF3P4-201ENST00000418852 495 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 403 ms