Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 SNORD115-16-201ENST00000363887 82 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 SNORD115-6-201ENST00000363942 82 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 SNORD115-42-201ENST00000364273 82 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 SNORD115-15-201ENST00000364809 81 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 SNORD115-1-201ENST00000364961 82 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 SNORD115-26-201ENST00000365067 82 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 SNORD115-10-201ENST00000365073 81 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 RNU6-806P-201ENST00000365147 105 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 SNORD115-43-201ENST00000365503 82 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 SNORD115-36-201ENST00000365629 82 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 Y_RNA.509-201ENST00000384506 99 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 RNU6-35P-201ENST00000384530 107 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 MIR140-201ENST00000385282 100 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 RPL21P38-201ENST00000418090 167 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 ELOCP20-201ENST00000422460 345 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 RNU7-62P-201ENST00000458856 62 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 RNA5SP285-201ENST00000516619 119 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 SNORA40.15-201ENST00000516884 107 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.32□□□□□ -2.36
CXCL12P48061 MIR4804-201ENST00000581683 73 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 MIR4676-201ENST00000583078 72 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 Z83818.1-201ENST00000603584 150 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 AL355297.3-201ENST00000604082 446 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 AP000942.4-201ENST00000604811 241 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 SNORD115-40-201ENST00000606510 82 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 MIR18A-201ENST00000362310 71 ntBASIC0.31□□□□□ -2.36
CXCL12P48061 SNORA25.1-201ENST00000362326 128 ntBASIC0.31□□□□□ -2.36
CXCL12P48061 Y_RNA.26-201ENST00000362539 101 ntBASIC0.31□□□□□ -2.36
CXCL12P48061 Y_RNA.37-201ENST00000362606 108 ntBASIC0.31□□□□□ -2.36
CXCL12P48061 Y_RNA.214-201ENST00000364201 112 ntBASIC0.31□□□□□ -2.36
CXCL12P48061 RNU6-514P-201ENST00000384208 107 ntBASIC0.31□□□□□ -2.36
CXCL12P48061 MIR548A2-201ENST00000384956 97 ntBASIC0.31□□□□□ -2.36
CXCL12P48061 MIR518F-201ENST00000384973 87 ntBASIC0.31□□□□□ -2.36
CXCL12P48061 Y_RNA.587-201ENST00000391210 103 ntBASIC0.31□□□□□ -2.36
CXCL12P48061 AC022028.1-201ENST00000412054 408 ntBASIC0.31□□□□□ -2.36
CXCL12P48061 MTATP6P23-201ENST00000440153 476 ntBASIC0.31□□□□□ -2.36
CXCL12P48061 MTCO2P24-201ENST00000515611 426 ntBASIC0.31□□□□□ -2.36
CXCL12P48061 RNU6-693P-201ENST00000516134 107 ntBASIC0.31□□□□□ -2.36
CXCL12P48061 RNY3P15-201ENST00000516297 97 ntBASIC0.31□□□□□ -2.36
CXCL12P48061 Y_RNA.721-201ENST00000517207 102 ntBASIC0.31□□□□□ -2.36
CXCL12P48061 MIR3612-201ENST00000579753 87 ntBASIC0.31□□□□□ -2.36
CXCL12P48061 AL008718.3-201ENST00000610217 321 ntBASIC0.31□□□□□ -2.36
CXCL12P48061 MIR8055-201ENST00000610739 97 ntBASIC0.31□□□□□ -2.36
CXCL12P48061 MIR6740-201ENST00000618268 113 ntBASIC0.31□□□□□ -2.36
CXCL12P48061 snoU18.1-201ENST00000629629 71 ntBASIC0.31□□□□□ -2.36
CXCL12P48061 Y_RNA.19-201ENST00000362462 99 ntBASIC0.3□□□□□ -2.36
CXCL12P48061 RNU6-770P-201ENST00000363929 105 ntBASIC0.3□□□□□ -2.36
CXCL12P48061 Y_RNA.217-201ENST00000364214 105 ntBASIC0.3□□□□□ -2.36
CXCL12P48061 RNU6-326P-201ENST00000365480 107 ntBASIC0.3□□□□□ -2.36
CXCL12P48061 SNORD61-201ENST00000384252 73 ntBASIC0.3□□□□□ -2.36
CXCL12P48061 SNORD38B-201ENST00000384690 67 ntBASIC0.3□□□□□ -2.36
CXCL12P48061 Y_RNA.572-201ENST00000384757 98 ntBASIC0.3□□□□□ -2.36
CXCL12P48061 SNORA40.5-201ENST00000391061 128 ntBASIC0.3□□□□□ -2.36
CXCL12P48061 SNORA53-201ENST00000391141 249 ntBASIC0.3□□□□□ -2.36
CXCL12P48061 MTCO2P12-201ENST00000427426 682 ntBASIC0.3□□□□□ -2.36
CXCL12P48061 AC087499.4-201ENST00000448505 178 ntBASIC0.3□□□□□ -2.36
CXCL12P48061 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.3□□□□□ -2.36
CXCL12P48061 RNU7-56P-201ENST00000458744 62 ntBASIC0.3□□□□□ -2.36
CXCL12P48061 Y_RNA.641-201ENST00000459414 105 ntBASIC0.3□□□□□ -2.36
CXCL12P48061 SNORA68.3-201ENST00000515906 83 ntBASIC0.3□□□□□ -2.36
CXCL12P48061 RN7SKP12-201ENST00000516275 143 ntBASIC0.3□□□□□ -2.36
CXCL12P48061 SNORD36C-201ENST00000516733 66 ntBASIC0.3□□□□□ -2.36
CXCL12P48061 MIR4662B-201ENST00000579498 81 ntBASIC0.3□□□□□ -2.36
CXCL12P48061 AL162730.1-201ENST00000605734 292 ntBASIC0.3□□□□□ -2.36
CXCL12P48061 SNORD38B-202ENST00000625943 69 ntBASIC0.3□□□□□ -2.36
CXCL12P48061 AC010332.2-201ENST00000613083 1904 ntBASIC0.3□□□□□ -2.36
CXCL12P48061 Y_RNA.16-201ENST00000362421 102 ntBASIC0.29□□□□□ -2.36
CXCL12P48061 Y_RNA.380-201ENST00000365663 111 ntBASIC0.29□□□□□ -2.36
CXCL12P48061 SNORA27-201ENST00000384323 126 ntBASIC0.29□□□□□ -2.36
CXCL12P48061 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.29□□□□□ -2.36
CXCL12P48061 RNU7-73P-201ENST00000458743 63 ntBASIC0.29□□□□□ -2.36
CXCL12P48061 Y_RNA.631-201ENST00000459607 101 ntBASIC0.29□□□□□ -2.36
CXCL12P48061 SNORA27.4-201ENST00000516650 95 ntBASIC0.29□□□□□ -2.36
CXCL12P48061 RNU6-1270P-201ENST00000517128 108 ntBASIC0.29□□□□□ -2.36
CXCL12P48061 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.29□□□□□ -2.36
CXCL12P48061 RNU6-988P-201ENST00000519081 107 ntBASIC0.29□□□□□ -2.36
CXCL12P48061 AC131281.1-201ENST00000522984 164 ntBASIC0.29□□□□□ -2.36
CXCL12P48061 AC037487.3-201ENST00000606668 112 ntBASIC0.29□□□□□ -2.36
CXCL12P48061 Y_RNA.802-201ENST00000614892 130 ntBASIC0.29□□□□□ -2.36
CXCL12P48061 Z97988.1-201ENST00000637697 135 ntBASIC0.29□□□□□ -2.36
CXCL12P48061 Y_RNA.24-201ENST00000362508 103 ntBASIC0.28□□□□□ -2.36
CXCL12P48061 Y_RNA.64-201ENST00000362845 102 ntBASIC0.28□□□□□ -2.36
CXCL12P48061 Y_RNA.210-201ENST00000364161 110 ntBASIC0.28□□□□□ -2.36
CXCL12P48061 SNORA22B-201ENST00000383876 138 ntBASIC0.28□□□□□ -2.36
CXCL12P48061 SNORD24-201ENST00000383884 75 ntBASIC0.28□□□□□ -2.36
CXCL12P48061 Y_RNA.527-201ENST00000384573 102 ntBASIC0.28□□□□□ -2.36
CXCL12P48061 MIR588-201ENST00000384900 83 ntBASIC0.28□□□□□ -2.36
CXCL12P48061 MIR526A2-201ENST00000390198 65 ntBASIC0.28□□□□□ -2.36
CXCL12P48061 AL138752.1-201ENST00000452964 351 ntBASIC0.28□□□□□ -2.36
CXCL12P48061 MTND4LP30-201ENST00000454092 297 ntBASIC0.28□□□□□ -2.36
CXCL12P48061 RPS29P24-201ENST00000486345 171 ntBASIC0.28□□□□□ -2.36
CXCL12P48061 RNA5SP476-201ENST00000516613 103 ntBASIC0.28□□□□□ -2.36
CXCL12P48061 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.28□□□□□ -2.36
CXCL12P48061 AC100767.1-201ENST00000528178 123 ntBASIC0.28□□□□□ -2.36
CXCL12P48061 AL160413.1-201ENST00000622780 310 ntBASIC0.28□□□□□ -2.36
CXCL12P48061 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.28□□□□□ -2.37
CXCL12P48061 RNU6-1309P-201ENST00000363305 108 ntBASIC0.27□□□□□ -2.37
CXCL12P48061 MIR938-201ENST00000401216 83 ntBASIC0.27□□□□□ -2.37
CXCL12P48061 RNU6-1190P-201ENST00000410811 104 ntBASIC0.27□□□□□ -2.37
CXCL12P48061 RNU6-602P-201ENST00000411155 105 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms