Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 RNU6-934P-201ENST00000365154 107 ntBASIC0.36□□□□□ -2.35
TNFSF9P41273 RNU6-396P-201ENST00000365369 105 ntBASIC0.36□□□□□ -2.35
TNFSF9P41273 RNU6-211P-201ENST00000384047 107 ntBASIC0.36□□□□□ -2.35
TNFSF9P41273 SNORA24-201ENST00000384096 131 ntBASIC0.36□□□□□ -2.35
TNFSF9P41273 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
TNFSF9P41273 MIR520H-201ENST00000385126 88 ntBASIC0.36□□□□□ -2.35
TNFSF9P41273 MIR548P-201ENST00000408336 84 ntBASIC0.36□□□□□ -2.35
TNFSF9P41273 RNU6-101P-201ENST00000410323 104 ntBASIC0.36□□□□□ -2.35
TNFSF9P41273 MTCO2P12-201ENST00000427426 682 ntBASIC0.36□□□□□ -2.35
TNFSF9P41273 AF228730.3-201ENST00000436691 102 ntBASIC0.36□□□□□ -2.35
TNFSF9P41273 SNORD77.4-201ENST00000516158 81 ntBASIC0.36□□□□□ -2.35
TNFSF9P41273 RNU6-561P-201ENST00000516222 102 ntBASIC0.36□□□□□ -2.35
TNFSF9P41273 RNU2-31P-201ENST00000516954 155 ntBASIC0.36□□□□□ -2.35
TNFSF9P41273 MIR2681-201ENST00000581814 105 ntBASIC0.36□□□□□ -2.35
TNFSF9P41273 AC087685.1-201ENST00000587507 141 ntBASIC0.36□□□□□ -2.35
TNFSF9P41273 MIR8055-201ENST00000610739 97 ntBASIC0.36□□□□□ -2.35
TNFSF9P41273 AC010332.2-201ENST00000613083 1904 ntBASIC0.36□□□□□ -2.35
TNFSF9P41273 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
TNFSF9P41273 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.35□□□□□ -2.35
TNFSF9P41273 MIR1-1-201ENST00000362147 71 ntBASIC0.35□□□□□ -2.35
TNFSF9P41273 Y_RNA.37-201ENST00000362606 108 ntBASIC0.35□□□□□ -2.35
TNFSF9P41273 Y_RNA.66-201ENST00000362862 102 ntBASIC0.35□□□□□ -2.35
TNFSF9P41273 Y_RNA.229-201ENST00000364347 113 ntBASIC0.35□□□□□ -2.35
TNFSF9P41273 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
TNFSF9P41273 Y_RNA.455-201ENST00000384230 98 ntBASIC0.35□□□□□ -2.35
TNFSF9P41273 Y_RNA.526-201ENST00000384572 110 ntBASIC0.35□□□□□ -2.35
TNFSF9P41273 SNORD12C-201ENST00000386307 89 ntBASIC0.35□□□□□ -2.35
TNFSF9P41273 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.35□□□□□ -2.35
TNFSF9P41273 RNU6-847P-201ENST00000411115 108 ntBASIC0.35□□□□□ -2.35
TNFSF9P41273 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.35□□□□□ -2.35
TNFSF9P41273 MTATP8P1-201ENST00000467115 207 ntBASIC0.35□□□□□ -2.35
TNFSF9P41273 SNORA68.3-201ENST00000515906 83 ntBASIC0.35□□□□□ -2.35
TNFSF9P41273 RNU6-693P-201ENST00000516134 107 ntBASIC0.35□□□□□ -2.35
TNFSF9P41273 SNORA27.4-201ENST00000516650 95 ntBASIC0.35□□□□□ -2.35
TNFSF9P41273 MIR2115-201ENST00000516657 100 ntBASIC0.35□□□□□ -2.35
TNFSF9P41273 MIR4804-201ENST00000581683 73 ntBASIC0.35□□□□□ -2.35
TNFSF9P41273 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.35□□□□□ -2.35
TNFSF9P41273 AC134503.1-201ENST00000633048 54 ntBASIC0.35□□□□□ -2.35
TNFSF9P41273 RNU6-1309P-201ENST00000363305 108 ntBASIC0.34□□□□□ -2.36
TNFSF9P41273 Y_RNA.128-201ENST00000363391 112 ntBASIC0.34□□□□□ -2.36
TNFSF9P41273 Y_RNA.158-201ENST00000363651 101 ntBASIC0.34□□□□□ -2.36
TNFSF9P41273 RNU6-740P-201ENST00000364734 105 ntBASIC0.34□□□□□ -2.36
TNFSF9P41273 RNU6-1138P-201ENST00000365359 106 ntBASIC0.34□□□□□ -2.36
TNFSF9P41273 SNORA1-201ENST00000384107 130 ntBASIC0.34□□□□□ -2.36
TNFSF9P41273 RNU6-1289P-201ENST00000384431 106 ntBASIC0.34□□□□□ -2.36
TNFSF9P41273 MIR520F-201ENST00000384824 87 ntBASIC0.34□□□□□ -2.36
TNFSF9P41273 Y_RNA.622-201ENST00000411091 108 ntBASIC0.34□□□□□ -2.36
TNFSF9P41273 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.34□□□□□ -2.36
TNFSF9P41273 RNU7-56P-201ENST00000458744 62 ntBASIC0.34□□□□□ -2.36
TNFSF9P41273 RNU7-67P-201ENST00000459003 62 ntBASIC0.34□□□□□ -2.36
TNFSF9P41273 RNU6-1338P-201ENST00000516328 91 ntBASIC0.34□□□□□ -2.36
TNFSF9P41273 SNORA40.15-201ENST00000516884 107 ntBASIC0.34□□□□□ -2.36
TNFSF9P41273 MIR4643-201ENST00000577473 78 ntBASIC0.34□□□□□ -2.36
TNFSF9P41273 MIR4676-201ENST00000583078 72 ntBASIC0.34□□□□□ -2.36
TNFSF9P41273 AP001282.2-201ENST00000616149 309 ntBASIC0.34□□□□□ -2.36
TNFSF9P41273 AC134878.1-201ENST00000619901 243 ntBASIC0.34□□□□□ -2.36
TNFSF9P41273 SNORD115-28-201ENST00000363931 81 ntBASIC0.33□□□□□ -2.36
TNFSF9P41273 SNORA63.7-201ENST00000365579 123 ntBASIC0.33□□□□□ -2.36
TNFSF9P41273 RNU6-144P-201ENST00000383951 107 ntBASIC0.33□□□□□ -2.36
TNFSF9P41273 RNU6-484P-201ENST00000384016 107 ntBASIC0.33□□□□□ -2.36
TNFSF9P41273 MIR573-201ENST00000384964 99 ntBASIC0.33□□□□□ -2.36
TNFSF9P41273 RNU6-1203P-201ENST00000410703 110 ntBASIC0.33□□□□□ -2.36
TNFSF9P41273 RNU6-602P-201ENST00000411155 105 ntBASIC0.33□□□□□ -2.36
TNFSF9P41273 MTCYBP6-201ENST00000441810 138 ntBASIC0.33□□□□□ -2.36
TNFSF9P41273 SNRPGP8-201ENST00000454064 226 ntBASIC0.33□□□□□ -2.36
TNFSF9P41273 RNU7-62P-201ENST00000458856 62 ntBASIC0.33□□□□□ -2.36
TNFSF9P41273 MIR4724-201ENST00000579485 89 ntBASIC0.33□□□□□ -2.36
TNFSF9P41273 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.33□□□□□ -2.36
TNFSF9P41273 AP000942.4-201ENST00000604811 241 ntBASIC0.33□□□□□ -2.36
TNFSF9P41273 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.33□□□□□ -2.36
TNFSF9P41273 MIR367-201ENST00000362299 68 ntBASIC0.32□□□□□ -2.36
TNFSF9P41273 MIR18A-201ENST00000362310 71 ntBASIC0.32□□□□□ -2.36
TNFSF9P41273 SNORA25.1-201ENST00000362326 128 ntBASIC0.32□□□□□ -2.36
TNFSF9P41273 Y_RNA.23-201ENST00000362496 106 ntBASIC0.32□□□□□ -2.36
TNFSF9P41273 Y_RNA.237-201ENST00000364439 102 ntBASIC0.32□□□□□ -2.36
TNFSF9P41273 RNU6-326P-201ENST00000365480 107 ntBASIC0.32□□□□□ -2.36
TNFSF9P41273 MT-TW-201ENST00000387382 68 ntBASIC0.32□□□□□ -2.36
TNFSF9P41273 RNU6-177P-201ENST00000411257 104 ntBASIC0.32□□□□□ -2.36
TNFSF9P41273 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.32□□□□□ -2.36
TNFSF9P41273 SERF1AP1-201ENST00000514575 187 ntBASIC0.32□□□□□ -2.36
TNFSF9P41273 RN7SKP12-201ENST00000516275 143 ntBASIC0.32□□□□□ -2.36
TNFSF9P41273 RNU6-977P-201ENST00000516411 103 ntBASIC0.32□□□□□ -2.36
TNFSF9P41273 RNU6-988P-201ENST00000519081 107 ntBASIC0.32□□□□□ -2.36
TNFSF9P41273 MIR3612-201ENST00000579753 87 ntBASIC0.32□□□□□ -2.36
TNFSF9P41273 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.32□□□□□ -2.36
TNFSF9P41273 MIR342-201ENST00000362212 99 ntBASIC0.31□□□□□ -2.36
TNFSF9P41273 Y_RNA.7-201ENST00000362352 102 ntBASIC0.31□□□□□ -2.36
TNFSF9P41273 SNORD115-34-201ENST00000362441 82 ntBASIC0.31□□□□□ -2.36
TNFSF9P41273 SNORD115-12-201ENST00000362583 82 ntBASIC0.31□□□□□ -2.36
TNFSF9P41273 SNORD115-29-201ENST00000362834 82 ntBASIC0.31□□□□□ -2.36
TNFSF9P41273 SNORD115-9-201ENST00000362912 82 ntBASIC0.31□□□□□ -2.36
TNFSF9P41273 SNORD115-21-201ENST00000362963 81 ntBASIC0.31□□□□□ -2.36
TNFSF9P41273 Y_RNA.85-201ENST00000363014 111 ntBASIC0.31□□□□□ -2.36
TNFSF9P41273 SNORD115-14-201ENST00000363090 81 ntBASIC0.31□□□□□ -2.36
TNFSF9P41273 SNORD115-13-201ENST00000363358 82 ntBASIC0.31□□□□□ -2.36
TNFSF9P41273 SNORD115-41-201ENST00000363608 82 ntBASIC0.31□□□□□ -2.36
TNFSF9P41273 SNORD115-11-201ENST00000363616 82 ntBASIC0.31□□□□□ -2.36
TNFSF9P41273 SNORD115-5-201ENST00000363633 82 ntBASIC0.31□□□□□ -2.36
TNFSF9P41273 SNORD115-39-201ENST00000363694 82 ntBASIC0.31□□□□□ -2.36
TNFSF9P41273 SNORD115-4-201ENST00000363810 82 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms