Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 MIR1295B-201ENST00000636144 60 ntBASIC-0.11□□□□□ -2.43
COL18A1P39060 U6.92-201ENST00000636464 89 ntBASIC-0.11□□□□□ -2.43
COL18A1P39060 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.11□□□□□ -2.43
COL18A1P39060 RNA5SP205-201ENST00000364653 136 ntBASIC-0.11□□□□□ -2.43
COL18A1P39060 SNORA1.1-201ENST00000364671 133 ntBASIC-0.11□□□□□ -2.43
COL18A1P39060 MIR644A-201ENST00000385262 94 ntBASIC-0.11□□□□□ -2.43
COL18A1P39060 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.11□□□□□ -2.43
COL18A1P39060 AL512326.2-201ENST00000426359 151 ntBASIC-0.11□□□□□ -2.43
COL18A1P39060 DEFB117-201ENST00000602356 141 ntBASIC-0.11□□□□□ -2.43
COL18A1P39060 AP000942.4-201ENST00000604811 241 ntBASIC-0.11□□□□□ -2.43
COL18A1P39060 SNORA36.1-201ENST00000363424 132 ntBASIC-0.12□□□□□ -2.43
COL18A1P39060 SNORA32.1-201ENST00000364514 115 ntBASIC-0.12□□□□□ -2.43
COL18A1P39060 SNORD114-3-201ENST00000364969 75 ntBASIC-0.12□□□□□ -2.43
COL18A1P39060 RNU6-708P-201ENST00000384217 107 ntBASIC-0.12□□□□□ -2.43
COL18A1P39060 SNORA27-201ENST00000384323 126 ntBASIC-0.12□□□□□ -2.43
COL18A1P39060 RNU6-1215P-201ENST00000384441 102 ntBASIC-0.12□□□□□ -2.43
COL18A1P39060 RNU4-14P-201ENST00000410858 122 ntBASIC-0.12□□□□□ -2.43
COL18A1P39060 RNU6-718P-201ENST00000516166 105 ntBASIC-0.12□□□□□ -2.43
COL18A1P39060 RNU7-149P-201ENST00000516739 59 ntBASIC-0.12□□□□□ -2.43
COL18A1P39060 MIR4423-201ENST00000580922 80 ntBASIC-0.12□□□□□ -2.43
COL18A1P39060 AC080013.6-201ENST00000606185 215 ntBASIC-0.12□□□□□ -2.43
COL18A1P39060 RNU6-899P-201ENST00000363947 107 ntBASIC-0.13□□□□□ -2.43
COL18A1P39060 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.13□□□□□ -2.43
COL18A1P39060 Y_RNA.516-201ENST00000384541 124 ntBASIC-0.13□□□□□ -2.43
COL18A1P39060 RNA5SP496-201ENST00000391240 109 ntBASIC-0.13□□□□□ -2.43
COL18A1P39060 SNORD93-201ENST00000408813 74 ntBASIC-0.13□□□□□ -2.43
COL18A1P39060 AC069271.1-201ENST00000445577 156 ntBASIC-0.13□□□□□ -2.43
COL18A1P39060 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.13□□□□□ -2.43
COL18A1P39060 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.13□□□□□ -2.43
COL18A1P39060 AC133485.4-201ENST00000561835 220 ntBASIC-0.13□□□□□ -2.43
COL18A1P39060 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.13□□□□□ -2.43
COL18A1P39060 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-0.13□□□□□ -2.43
COL18A1P39060 AC138305.3-201ENST00000624988 240 ntBASIC-0.13□□□□□ -2.43
COL18A1P39060 MTND5P32-201ENST00000560711 1802 ntBASIC-0.14□□□□□ -2.43
COL18A1P39060 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.14□□□□□ -2.43
COL18A1P39060 SNORD63-201ENST00000384262 68 ntBASIC-0.14□□□□□ -2.43
COL18A1P39060 RNU6-21P-201ENST00000384710 107 ntBASIC-0.14□□□□□ -2.43
COL18A1P39060 MIR563-201ENST00000385080 79 ntBASIC-0.14□□□□□ -2.43
COL18A1P39060 MIR892B-201ENST00000401279 77 ntBASIC-0.14□□□□□ -2.43
COL18A1P39060 RNU6-370P-201ENST00000411008 104 ntBASIC-0.14□□□□□ -2.43
COL18A1P39060 AC096644.2-201ENST00000429278 159 ntBASIC-0.14□□□□□ -2.43
COL18A1P39060 SEPT14P8-201ENST00000508026 178 ntBASIC-0.14□□□□□ -2.43
COL18A1P39060 RNU6-693P-201ENST00000516134 107 ntBASIC-0.14□□□□□ -2.43
COL18A1P39060 AC007751.1-201ENST00000529260 376 ntBASIC-0.14□□□□□ -2.43
COL18A1P39060 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.14□□□□□ -2.43
COL18A1P39060 AC006600.1-201ENST00000572529 153 ntBASIC-0.14□□□□□ -2.43
COL18A1P39060 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-0.14□□□□□ -2.43
COL18A1P39060 MIR4743-201ENST00000584576 69 ntBASIC-0.14□□□□□ -2.43
COL18A1P39060 MIR8064-201ENST00000612863 90 ntBASIC-0.14□□□□□ -2.43
COL18A1P39060 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.14□□□□□ -2.43
COL18A1P39060 RNU4-32P-201ENST00000363404 141 ntBASIC-0.14□□□□□ -2.43
COL18A1P39060 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.14□□□□□ -2.43
COL18A1P39060 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.14□□□□□ -2.43
COL18A1P39060 SNORA72.4-201ENST00000384174 132 ntBASIC-0.14□□□□□ -2.43
COL18A1P39060 RNU6-913P-201ENST00000390913 95 ntBASIC-0.14□□□□□ -2.43
COL18A1P39060 SNORD77.3-201ENST00000391113 65 ntBASIC-0.14□□□□□ -2.43
COL18A1P39060 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-0.14□□□□□ -2.43
COL18A1P39060 MIR548F1-201ENST00000408667 84 ntBASIC-0.14□□□□□ -2.43
COL18A1P39060 RPL39P25-201ENST00000449384 154 ntBASIC-0.14□□□□□ -2.43
COL18A1P39060 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.14□□□□□ -2.43
COL18A1P39060 Y_RNA.691-201ENST00000516611 103 ntBASIC-0.14□□□□□ -2.43
COL18A1P39060 RPS29P30-201ENST00000600975 111 ntBASIC-0.14□□□□□ -2.43
COL18A1P39060 AC124312.5-201ENST00000604451 268 ntBASIC-0.14□□□□□ -2.43
COL18A1P39060 DLEU2_2.2-201ENST00000615474 90 ntBASIC-0.14□□□□□ -2.43
COL18A1P39060 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.15□□□□□ -2.43
COL18A1P39060 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.15□□□□□ -2.43
COL18A1P39060 RNU6-740P-201ENST00000364734 105 ntBASIC-0.15□□□□□ -2.43
COL18A1P39060 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.15□□□□□ -2.43
COL18A1P39060 RNU6-890P-201ENST00000384121 107 ntBASIC-0.15□□□□□ -2.43
COL18A1P39060 RNU2-14P-201ENST00000411053 191 ntBASIC-0.15□□□□□ -2.43
COL18A1P39060 RPS29P24-201ENST00000486345 171 ntBASIC-0.15□□□□□ -2.43
COL18A1P39060 RNU6-126P-201ENST00000516685 103 ntBASIC-0.15□□□□□ -2.43
COL18A1P39060 RNU6-135P-201ENST00000516769 101 ntBASIC-0.15□□□□□ -2.43
COL18A1P39060 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.15□□□□□ -2.43
COL18A1P39060 U4.2-201ENST00000618561 85 ntBASIC-0.15□□□□□ -2.43
COL18A1P39060 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.15□□□□□ -2.43
COL18A1P39060 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.16□□□□□ -2.43
COL18A1P39060 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.16□□□□□ -2.43
COL18A1P39060 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.16□□□□□ -2.43
COL18A1P39060 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.16□□□□□ -2.43
COL18A1P39060 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.16□□□□□ -2.43
COL18A1P39060 Y_RNA.599-201ENST00000410489 109 ntBASIC-0.16□□□□□ -2.43
COL18A1P39060 AC016907.1-201ENST00000419483 435 ntBASIC-0.16□□□□□ -2.43
COL18A1P39060 POLR2KP2-201ENST00000438155 177 ntBASIC-0.16□□□□□ -2.43
COL18A1P39060 U8.20-201ENST00000459445 131 ntBASIC-0.16□□□□□ -2.43
COL18A1P39060 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.16□□□□□ -2.43
COL18A1P39060 RNU6-138P-201ENST00000515952 107 ntBASIC-0.16□□□□□ -2.43
COL18A1P39060 RNU6-699P-201ENST00000517081 110 ntBASIC-0.16□□□□□ -2.43
COL18A1P39060 AC100767.1-201ENST00000528178 123 ntBASIC-0.16□□□□□ -2.43
COL18A1P39060 MIR4662B-201ENST00000579498 81 ntBASIC-0.16□□□□□ -2.43
COL18A1P39060 MIR3145-201ENST00000580727 82 ntBASIC-0.16□□□□□ -2.43
COL18A1P39060 AL121655.1-201ENST00000605811 308 ntBASIC-0.16□□□□□ -2.43
COL18A1P39060 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.16□□□□□ -2.43
COL18A1P39060 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.16□□□□□ -2.43
COL18A1P39060 MIR6755-201ENST00000619993 66 ntBASIC-0.16□□□□□ -2.43
COL18A1P39060 AC112487.2-201ENST00000637950 304 ntBASIC-0.16□□□□□ -2.43
COL18A1P39060 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.17□□□□□ -2.44
COL18A1P39060 MIR30D-201ENST00000362283 70 ntBASIC-0.17□□□□□ -2.44
COL18A1P39060 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.17□□□□□ -2.44
COL18A1P39060 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms