Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SNORA25.7-201ENST00000364375 127 ntBASIC1.64□□□□□ -2.15
COL15A1P39059 AC019176.1-201ENST00000518519 225 ntBASIC1.64□□□□□ -2.15
COL15A1P39059 AC090049.2-201ENST00000550377 109 ntBASIC1.64□□□□□ -2.15
COL15A1P39059 MIR3937-201ENST00000580135 106 ntBASIC1.64□□□□□ -2.15
COL15A1P39059 MIR4422-201ENST00000581938 83 ntBASIC1.64□□□□□ -2.15
COL15A1P39059 RN7SL793P-201ENST00000583259 296 ntBASIC1.64□□□□□ -2.15
COL15A1P39059 SNORD1A-201ENST00000364968 72 ntBASIC1.63□□□□□ -2.15
COL15A1P39059 RNU6-449P-201ENST00000383914 107 ntBASIC1.63□□□□□ -2.15
COL15A1P39059 RNU6-804P-201ENST00000384286 107 ntBASIC1.63□□□□□ -2.15
COL15A1P39059 MIR548I3-201ENST00000408378 149 ntBASIC1.63□□□□□ -2.15
COL15A1P39059 MIR548I1-201ENST00000408810 149 ntBASIC1.63□□□□□ -2.15
COL15A1P39059 SNX2P2-201ENST00000424553 323 ntBASIC1.63□□□□□ -2.15
COL15A1P39059 RNA5SP436-201ENST00000516020 115 ntBASIC1.63□□□□□ -2.15
COL15A1P39059 RNU6-830P-201ENST00000516353 107 ntBASIC1.63□□□□□ -2.15
COL15A1P39059 RNU6-922P-201ENST00000516753 99 ntBASIC1.63□□□□□ -2.15
COL15A1P39059 MIR3129-201ENST00000581095 76 ntBASIC1.63□□□□□ -2.15
COL15A1P39059 AL365434.2-201ENST00000607979 234 ntBASIC1.63□□□□□ -2.15
COL15A1P39059 AC134878.1-201ENST00000619901 243 ntBASIC1.63□□□□□ -2.15
COL15A1P39059 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.63□□□□□ -2.15
COL15A1P39059 MIR6844-201ENST00000637122 62 ntBASIC1.63□□□□□ -2.15
COL15A1P39059 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
COL15A1P39059 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.63□□□□□ -2.15
COL15A1P39059 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
COL15A1P39059 SNORD116-18-201ENST00000383961 92 ntBASIC1.62□□□□□ -2.15
COL15A1P39059 Y_RNA.464-201ENST00000384282 110 ntBASIC1.62□□□□□ -2.15
COL15A1P39059 RNU6-1065P-201ENST00000384513 106 ntBASIC1.62□□□□□ -2.15
COL15A1P39059 MIR518F-201ENST00000384973 87 ntBASIC1.62□□□□□ -2.15
COL15A1P39059 U8.17-201ENST00000391292 132 ntBASIC1.62□□□□□ -2.15
COL15A1P39059 MIR548J-201ENST00000408833 112 ntBASIC1.62□□□□□ -2.15
COL15A1P39059 SNORA18.4-201ENST00000516440 124 ntBASIC1.62□□□□□ -2.15
COL15A1P39059 RNA5SP395-201ENST00000516567 118 ntBASIC1.62□□□□□ -2.15
COL15A1P39059 AC007751.1-201ENST00000529260 376 ntBASIC1.62□□□□□ -2.15
COL15A1P39059 MIR3144-201ENST00000579460 79 ntBASIC1.62□□□□□ -2.15
COL15A1P39059 DNAJC19P2-201ENST00000593340 302 ntBASIC1.62□□□□□ -2.15
COL15A1P39059 MIR6767-201ENST00000637302 66 ntBASIC1.62□□□□□ -2.15
COL15A1P39059 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
COL15A1P39059 RNU6-978P-201ENST00000364371 103 ntBASIC1.61□□□□□ -2.15
COL15A1P39059 SNORA1-201ENST00000384107 130 ntBASIC1.61□□□□□ -2.15
COL15A1P39059 RNU6-768P-201ENST00000384683 107 ntBASIC1.61□□□□□ -2.15
COL15A1P39059 MIR548A2-201ENST00000384956 97 ntBASIC1.61□□□□□ -2.15
COL15A1P39059 MIR653-201ENST00000385279 96 ntBASIC1.61□□□□□ -2.15
COL15A1P39059 RNU6-394P-201ENST00000410735 107 ntBASIC1.61□□□□□ -2.15
COL15A1P39059 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.61□□□□□ -2.15
COL15A1P39059 HAR1A.1-201ENST00000459583 118 ntBASIC1.61□□□□□ -2.15
COL15A1P39059 RNU7-181P-201ENST00000517234 74 ntBASIC1.61□□□□□ -2.15
COL15A1P39059 AL513534.2-201ENST00000603836 250 ntBASIC1.61□□□□□ -2.15
COL15A1P39059 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
COL15A1P39059 SNORD114-27-201ENST00000363766 70 ntBASIC1.6□□□□□ -2.15
COL15A1P39059 SNORA1.2-201ENST00000365189 134 ntBASIC1.6□□□□□ -2.15
COL15A1P39059 Y_RNA.542-201ENST00000384641 111 ntBASIC1.6□□□□□ -2.15
COL15A1P39059 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.6□□□□□ -2.15
COL15A1P39059 AC087499.4-201ENST00000448505 178 ntBASIC1.6□□□□□ -2.15
COL15A1P39059 SNORD123-201ENST00000459473 70 ntBASIC1.6□□□□□ -2.15
COL15A1P39059 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.6□□□□□ -2.15
COL15A1P39059 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
COL15A1P39059 Y_RNA.37-201ENST00000362606 108 ntBASIC1.59□□□□□ -2.15
COL15A1P39059 RNA5SP457-201ENST00000363657 124 ntBASIC1.59□□□□□ -2.15
COL15A1P39059 RNU6-151P-201ENST00000364158 107 ntBASIC1.59□□□□□ -2.15
COL15A1P39059 Y_RNA.241-201ENST00000364470 117 ntBASIC1.59□□□□□ -2.15
COL15A1P39059 RNU6-597P-201ENST00000365620 102 ntBASIC1.59□□□□□ -2.15
COL15A1P39059 Y_RNA.410-201ENST00000383992 113 ntBASIC1.59□□□□□ -2.15
COL15A1P39059 RNU6-1067P-201ENST00000384752 107 ntBASIC1.59□□□□□ -2.15
COL15A1P39059 RNU1-78P-201ENST00000391248 165 ntBASIC1.59□□□□□ -2.15
COL15A1P39059 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.59□□□□□ -2.15
COL15A1P39059 AF228730.3-201ENST00000436691 102 ntBASIC1.59□□□□□ -2.15
COL15A1P39059 AC107297.1-201ENST00000459991 176 ntBASIC1.59□□□□□ -2.15
COL15A1P39059 RNU4-57P-201ENST00000515980 135 ntBASIC1.59□□□□□ -2.15
COL15A1P39059 RNU7-121P-201ENST00000516604 62 ntBASIC1.59□□□□□ -2.15
COL15A1P39059 AP003484.1-201ENST00000530974 250 ntBASIC1.59□□□□□ -2.15
COL15A1P39059 MTND1P7-201ENST00000632801 297 ntBASIC1.59□□□□□ -2.15
COL15A1P39059 AC021753.1-201ENST00000635724 168 ntBASIC1.59□□□□□ -2.15
COL15A1P39059 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.59□□□□□ -2.15
COL15A1P39059 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
COL15A1P39059 MIR302D-201ENST00000362275 68 ntBASIC1.59□□□□□ -2.16
COL15A1P39059 RNU6-1130P-201ENST00000365434 107 ntBASIC1.59□□□□□ -2.16
COL15A1P39059 Y_RNA.370-201ENST00000365589 108 ntBASIC1.59□□□□□ -2.16
COL15A1P39059 Y_RNA.398-201ENST00000383952 99 ntBASIC1.59□□□□□ -2.16
COL15A1P39059 RNU6-1189P-201ENST00000383958 107 ntBASIC1.59□□□□□ -2.16
COL15A1P39059 RNY1P4-201ENST00000384595 115 ntBASIC1.59□□□□□ -2.16
COL15A1P39059 Y_RNA.580-201ENST00000391004 95 ntBASIC1.59□□□□□ -2.16
COL15A1P39059 SNORA75.5-201ENST00000391291 81 ntBASIC1.59□□□□□ -2.16
COL15A1P39059 RNA5SP127-201ENST00000411051 133 ntBASIC1.59□□□□□ -2.16
COL15A1P39059 RNU1-98P-201ENST00000458992 160 ntBASIC1.59□□□□□ -2.16
COL15A1P39059 SNORA74.3-201ENST00000517108 154 ntBASIC1.59□□□□□ -2.16
COL15A1P39059 MIR3646-201ENST00000578301 84 ntBASIC1.59□□□□□ -2.16
COL15A1P39059 AL365205.2-201ENST00000594586 68 ntBASIC1.59□□□□□ -2.16
COL15A1P39059 MIR3658-201ENST00000636291 56 ntBASIC1.59□□□□□ -2.16
COL15A1P39059 RNU6-1336P-201ENST00000383886 109 ntBASIC1.58□□□□□ -2.16
COL15A1P39059 RNU6-997P-201ENST00000384725 107 ntBASIC1.58□□□□□ -2.16
COL15A1P39059 MIR520C-201ENST00000385005 87 ntBASIC1.58□□□□□ -2.16
COL15A1P39059 RNU6-947P-201ENST00000516264 106 ntBASIC1.58□□□□□ -2.16
COL15A1P39059 AL357312.1-201ENST00000603879 298 ntBASIC1.58□□□□□ -2.16
COL15A1P39059 GHRLOS.1-201ENST00000610995 70 ntBASIC1.58□□□□□ -2.16
COL15A1P39059 Y_RNA.778-201ENST00000620203 90 ntBASIC1.58□□□□□ -2.16
COL15A1P39059 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.58□□□□□ -2.16
COL15A1P39059 AC008133.2-201ENST00000624540 351 ntBASIC1.58□□□□□ -2.16
COL15A1P39059 RNU6-818P-201ENST00000364837 108 ntBASIC1.57□□□□□ -2.16
COL15A1P39059 RNU4-11P-201ENST00000365287 132 ntBASIC1.57□□□□□ -2.16
COL15A1P39059 RNU6-1292P-201ENST00000383856 107 ntBASIC1.57□□□□□ -2.16
COL15A1P39059 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms