Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 MTND5P34-201ENST00000568888 325 ntBASIC0.05□□□□□ -2.4
BRCA1P38398 MIR4724-201ENST00000579485 89 ntBASIC0.05□□□□□ -2.4
BRCA1P38398 AC104408.1-201ENST00000605241 170 ntBASIC0.05□□□□□ -2.4
BRCA1P38398 AC078938.1-201ENST00000620993 318 ntBASIC0.05□□□□□ -2.4
BRCA1P38398 MIRLET7D-201ENST00000362263 87 ntBASIC0.04□□□□□ -2.4
BRCA1P38398 Y_RNA.439-201ENST00000384119 94 ntBASIC0.04□□□□□ -2.4
BRCA1P38398 SNORD63-201ENST00000384262 68 ntBASIC0.04□□□□□ -2.4
BRCA1P38398 MIR802-201ENST00000390235 94 ntBASIC0.04□□□□□ -2.4
BRCA1P38398 AC015818.7-201ENST00000428754 109 ntBASIC0.04□□□□□ -2.4
BRCA1P38398 MTCO1P5-201ENST00000433573 344 ntBASIC0.04□□□□□ -2.4
BRCA1P38398 AC087499.7-201ENST00000441958 109 ntBASIC0.04□□□□□ -2.4
BRCA1P38398 Y_RNA.631-201ENST00000459607 101 ntBASIC0.04□□□□□ -2.4
BRCA1P38398 RPS29P24-201ENST00000486345 171 ntBASIC0.04□□□□□ -2.4
BRCA1P38398 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.04□□□□□ -2.4
BRCA1P38398 MTND4LP32-201ENST00000636111 270 ntBASIC0.04□□□□□ -2.4
BRCA1P38398 Y_RNA.37-201ENST00000362606 108 ntBASIC0.03□□□□□ -2.4
BRCA1P38398 RNU4-90P-201ENST00000362773 141 ntBASIC0.03□□□□□ -2.4
BRCA1P38398 SNORD114-16-201ENST00000363044 70 ntBASIC0.03□□□□□ -2.4
BRCA1P38398 Y_RNA.376-201ENST00000365638 108 ntBASIC0.03□□□□□ -2.4
BRCA1P38398 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.03□□□□□ -2.4
BRCA1P38398 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.03□□□□□ -2.4
BRCA1P38398 AC091959.1-201ENST00000495857 238 ntBASIC0.03□□□□□ -2.4
BRCA1P38398 RNU6-365P-201ENST00000517113 106 ntBASIC0.03□□□□□ -2.4
BRCA1P38398 AC141557.1-201ENST00000540982 400 ntBASIC0.03□□□□□ -2.4
BRCA1P38398 AC020891.4-201ENST00000605745 93 ntBASIC0.03□□□□□ -2.4
BRCA1P38398 U6atac.1-201ENST00000616025 117 ntBASIC0.03□□□□□ -2.4
BRCA1P38398 Z97988.1-201ENST00000637697 135 ntBASIC0.03□□□□□ -2.4
BRCA1P38398 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.03□□□□□ -2.41
BRCA1P38398 MIR342-201ENST00000362212 99 ntBASIC0.03□□□□□ -2.41
BRCA1P38398 Y_RNA.42-201ENST00000362660 108 ntBASIC0.03□□□□□ -2.41
BRCA1P38398 Y_RNA.66-201ENST00000362862 102 ntBASIC0.03□□□□□ -2.41
BRCA1P38398 SNORA63C-201ENST00000364578 129 ntBASIC0.03□□□□□ -2.41
BRCA1P38398 RNA5SP517-201ENST00000364724 117 ntBASIC0.03□□□□□ -2.41
BRCA1P38398 MIR559-201ENST00000385188 96 ntBASIC0.03□□□□□ -2.41
BRCA1P38398 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.03□□□□□ -2.41
BRCA1P38398 HSPE1P25-201ENST00000455484 251 ntBASIC0.03□□□□□ -2.41
BRCA1P38398 MIR4768-201ENST00000585270 74 ntBASIC0.03□□□□□ -2.41
BRCA1P38398 AL049861.1-201ENST00000603130 150 ntBASIC0.03□□□□□ -2.41
BRCA1P38398 AC092447.9-201ENST00000603395 144 ntBASIC0.03□□□□□ -2.41
BRCA1P38398 RNU6-1115P-201ENST00000362490 106 ntBASIC0.02□□□□□ -2.41
BRCA1P38398 Y_RNA.39-201ENST00000362620 98 ntBASIC0.02□□□□□ -2.41
BRCA1P38398 Y_RNA.142-201ENST00000363491 102 ntBASIC0.02□□□□□ -2.41
BRCA1P38398 SNORA8.2-201ENST00000384372 139 ntBASIC0.02□□□□□ -2.41
BRCA1P38398 Y_RNA.547-201ENST00000384654 119 ntBASIC0.02□□□□□ -2.41
BRCA1P38398 SEPT7P4-201ENST00000437076 306 ntBASIC0.02□□□□□ -2.41
BRCA1P38398 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.02□□□□□ -2.41
BRCA1P38398 AC040926.1-201ENST00000530195 238 ntBASIC0.02□□□□□ -2.41
BRCA1P38398 AP001180.6-201ENST00000584918 159 ntBASIC0.02□□□□□ -2.41
BRCA1P38398 Y_RNA.160-201ENST00000363677 92 ntBASIC0.01□□□□□ -2.41
BRCA1P38398 SNORD95.1-201ENST00000364099 68 ntBASIC0.01□□□□□ -2.41
BRCA1P38398 RNU6-937P-201ENST00000384325 106 ntBASIC0.01□□□□□ -2.41
BRCA1P38398 RNU6-308P-201ENST00000390957 107 ntBASIC0.01□□□□□ -2.41
BRCA1P38398 SNORA53-201ENST00000391141 249 ntBASIC0.01□□□□□ -2.41
BRCA1P38398 RNU6-130P-201ENST00000411112 103 ntBASIC0.01□□□□□ -2.41
BRCA1P38398 AL160004.2-201ENST00000432935 350 ntBASIC0.01□□□□□ -2.41
BRCA1P38398 AC010655.3-201ENST00000478818 450 ntBASIC0.01□□□□□ -2.41
BRCA1P38398 RNU6-998P-201ENST00000515894 101 ntBASIC0.01□□□□□ -2.41
BRCA1P38398 Y_RNA.660-201ENST00000516002 120 ntBASIC0.01□□□□□ -2.41
BRCA1P38398 RNA5SP94-201ENST00000516917 108 ntBASIC0.01□□□□□ -2.41
BRCA1P38398 RNU4-80P-201ENST00000363200 141 ntBASIC0.01□□□□□ -2.41
BRCA1P38398 RNU6-1309P-201ENST00000363305 108 ntBASIC0.01□□□□□ -2.41
BRCA1P38398 RNU6-876P-201ENST00000391295 104 ntBASIC0.01□□□□□ -2.41
BRCA1P38398 RN7SKP12-201ENST00000516275 143 ntBASIC0.01□□□□□ -2.41
BRCA1P38398 AC112693.2-201ENST00000556538 232 ntBASIC0.01□□□□□ -2.41
BRCA1P38398 MIR3678-201ENST00000578455 94 ntBASIC0.01□□□□□ -2.41
BRCA1P38398 MIR4491-201ENST00000581087 68 ntBASIC0.01□□□□□ -2.41
BRCA1P38398 Y_RNA.197-201ENST00000364004 102 ntBASIC0□□□□□ -2.41
BRCA1P38398 Y_RNA.203-201ENST00000364106 102 ntBASIC0□□□□□ -2.41
BRCA1P38398 RNU4-50P-201ENST00000364361 141 ntBASIC0□□□□□ -2.41
BRCA1P38398 Y_RNA.252-201ENST00000364556 101 ntBASIC0□□□□□ -2.41
BRCA1P38398 Y_RNA.351-201ENST00000365436 96 ntBASIC0□□□□□ -2.41
BRCA1P38398 RNU6-484P-201ENST00000384016 107 ntBASIC0□□□□□ -2.41
BRCA1P38398 Y_RNA.424-201ENST00000384063 103 ntBASIC0□□□□□ -2.41
BRCA1P38398 Y_RNA.567-201ENST00000384736 106 ntBASIC0□□□□□ -2.41
BRCA1P38398 SNORD93-201ENST00000408813 74 ntBASIC0□□□□□ -2.41
BRCA1P38398 RNU2-55P-201ENST00000411146 174 ntBASIC0□□□□□ -2.41
BRCA1P38398 AP003733.2-201ENST00000529409 171 ntBASIC0□□□□□ -2.41
BRCA1P38398 MIR3152-201ENST00000579801 74 ntBASIC0□□□□□ -2.41
BRCA1P38398 MIR4676-201ENST00000583078 72 ntBASIC0□□□□□ -2.41
BRCA1P38398 AL021707.8-201ENST00000609428 183 ntBASIC0□□□□□ -2.41
BRCA1P38398 AL662814.1-201ENST00000617364 121 ntBASIC0□□□□□ -2.41
BRCA1P38398 MIR302B-201ENST00000362188 73 ntBASIC-0.01□□□□□ -2.41
BRCA1P38398 RNU6-535P-201ENST00000384722 107 ntBASIC-0.01□□□□□ -2.41
BRCA1P38398 MIR563-201ENST00000385080 79 ntBASIC-0.01□□□□□ -2.41
BRCA1P38398 RNU6-763P-201ENST00000390865 106 ntBASIC-0.01□□□□□ -2.41
BRCA1P38398 RNA5SP496-201ENST00000391240 109 ntBASIC-0.01□□□□□ -2.41
BRCA1P38398 SNORA26.6-201ENST00000391256 115 ntBASIC-0.01□□□□□ -2.41
BRCA1P38398 MIR1257-201ENST00000408490 117 ntBASIC-0.01□□□□□ -2.41
BRCA1P38398 RNU6-101P-201ENST00000410323 104 ntBASIC-0.01□□□□□ -2.41
BRCA1P38398 MTND4LP30-201ENST00000454092 297 ntBASIC-0.01□□□□□ -2.41
BRCA1P38398 RNU6-469P-201ENST00000516253 101 ntBASIC-0.01□□□□□ -2.41
BRCA1P38398 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.01□□□□□ -2.41
BRCA1P38398 SNORA31.14-201ENST00000516728 116 ntBASIC-0.01□□□□□ -2.41
BRCA1P38398 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.01□□□□□ -2.41
BRCA1P38398 MIR1295B-201ENST00000636144 60 ntBASIC-0.01□□□□□ -2.41
BRCA1P38398 AC099654.14-201ENST00000638599 341 ntBASIC-0.01□□□□□ -2.41
BRCA1P38398 AC010332.2-201ENST00000613083 1904 ntBASIC-0.01□□□□□ -2.41
BRCA1P38398 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.01□□□□□ -2.41
BRCA1P38398 RNY4P3-201ENST00000365254 95 ntBASIC-0.01□□□□□ -2.41
BRCA1P38398 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms