Protein–RNA interactions for Protein: P35625

TIMP3, Metalloproteinase inhibitor 3, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3P35625 SNORA19-201ENST00000384737 128 ntBASIC1.34□□□□□ -2.19
TIMP3P35625 MIR526A1-201ENST00000384897 85 ntBASIC1.34□□□□□ -2.19
TIMP3P35625 U8.17-201ENST00000391292 132 ntBASIC1.34□□□□□ -2.19
TIMP3P35625 RNU6-938P-201ENST00000411285 103 ntBASIC1.34□□□□□ -2.19
TIMP3P35625 AL161935.2-201ENST00000414627 60 ntBASIC1.34□□□□□ -2.19
TIMP3P35625 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.34□□□□□ -2.19
TIMP3P35625 Y_RNA.686-201ENST00000516548 134 ntBASIC1.34□□□□□ -2.19
TIMP3P35625 SNORD36C-201ENST00000516733 66 ntBASIC1.34□□□□□ -2.19
TIMP3P35625 AP003484.1-201ENST00000530974 250 ntBASIC1.34□□□□□ -2.19
TIMP3P35625 MIR4781-201ENST00000585250 76 ntBASIC1.34□□□□□ -2.19
TIMP3P35625 FAM106DP-201ENST00000586416 501 ntBASIC1.34□□□□□ -2.19
TIMP3P35625 AC011603.4-201ENST00000611325 277 ntBASIC1.34□□□□□ -2.19
TIMP3P35625 MIR8074-201ENST00000615081 81 ntBASIC1.34□□□□□ -2.19
TIMP3P35625 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
TIMP3P35625 AP000648.3-201ENST00000623539 4507 ntBASIC1.33□□□□□ -2.2
TIMP3P35625 Y_RNA.164-201ENST00000363709 102 ntBASIC1.33□□□□□ -2.2
TIMP3P35625 RNA5SP259-201ENST00000365541 109 ntBASIC1.33□□□□□ -2.2
TIMP3P35625 MIR30A-201ENST00000385092 71 ntBASIC1.33□□□□□ -2.2
TIMP3P35625 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.33□□□□□ -2.2
TIMP3P35625 AL606753.1-201ENST00000427435 87 ntBASIC1.33□□□□□ -2.2
TIMP3P35625 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.33□□□□□ -2.2
TIMP3P35625 TRMT112P2-201ENST00000512910 132 ntBASIC1.33□□□□□ -2.2
TIMP3P35625 RNU6-1149P-201ENST00000516810 97 ntBASIC1.33□□□□□ -2.2
TIMP3P35625 RNU7-181P-201ENST00000517234 74 ntBASIC1.33□□□□□ -2.2
TIMP3P35625 MIR5197-201ENST00000583721 112 ntBASIC1.33□□□□□ -2.2
TIMP3P35625 U2.22-201ENST00000636441 106 ntBASIC1.33□□□□□ -2.2
TIMP3P35625 MIR376A2-201ENST00000636782 80 ntBASIC1.33□□□□□ -2.2
TIMP3P35625 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.33□□□□□ -2.2
TIMP3P35625 Y_RNA.241-201ENST00000364470 117 ntBASIC1.32□□□□□ -2.2
TIMP3P35625 MIR539-201ENST00000365690 78 ntBASIC1.32□□□□□ -2.2
TIMP3P35625 MIR513A1-201ENST00000385138 129 ntBASIC1.32□□□□□ -2.2
TIMP3P35625 AL603914.1-201ENST00000401964 204 ntBASIC1.32□□□□□ -2.2
TIMP3P35625 MIR1323-201ENST00000408090 73 ntBASIC1.32□□□□□ -2.2
TIMP3P35625 MTATP6P21-201ENST00000440681 189 ntBASIC1.32□□□□□ -2.2
TIMP3P35625 RNU6-1211P-201ENST00000459179 105 ntBASIC1.32□□□□□ -2.2
TIMP3P35625 Y_RNA.690-201ENST00000516603 95 ntBASIC1.32□□□□□ -2.2
TIMP3P35625 Y_RNA.692-201ENST00000516627 105 ntBASIC1.32□□□□□ -2.2
TIMP3P35625 SNORA18.7-201ENST00000516910 131 ntBASIC1.32□□□□□ -2.2
TIMP3P35625 SNORA77B-201ENST00000578179 125 ntBASIC1.32□□□□□ -2.2
TIMP3P35625 Y_RNA.757-201ENST00000578934 114 ntBASIC1.32□□□□□ -2.2
TIMP3P35625 U7.2-201ENST00000607576 63 ntBASIC1.32□□□□□ -2.2
TIMP3P35625 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
TIMP3P35625 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
TIMP3P35625 SNORA7.1-201ENST00000363750 139 ntBASIC1.31□□□□□ -2.2
TIMP3P35625 SNORA1.2-201ENST00000365189 134 ntBASIC1.31□□□□□ -2.2
TIMP3P35625 Y_RNA.440-201ENST00000384120 114 ntBASIC1.31□□□□□ -2.2
TIMP3P35625 RNU6-959P-201ENST00000384671 107 ntBASIC1.31□□□□□ -2.2
TIMP3P35625 SNORA40.5-201ENST00000391061 128 ntBASIC1.31□□□□□ -2.2
TIMP3P35625 HSPE1P24-201ENST00000450782 238 ntBASIC1.31□□□□□ -2.2
TIMP3P35625 RPS29P23-201ENST00000458635 123 ntBASIC1.31□□□□□ -2.2
TIMP3P35625 SNORD123-201ENST00000459473 70 ntBASIC1.31□□□□□ -2.2
TIMP3P35625 AC107297.1-201ENST00000459991 176 ntBASIC1.31□□□□□ -2.2
TIMP3P35625 SCARNA15-202ENST00000516881 127 ntBASIC1.31□□□□□ -2.2
TIMP3P35625 RNU6-971P-201ENST00000516920 106 ntBASIC1.31□□□□□ -2.2
TIMP3P35625 RNU7-70P-201ENST00000516941 66 ntBASIC1.31□□□□□ -2.2
TIMP3P35625 RNU1-92P-201ENST00000517017 135 ntBASIC1.31□□□□□ -2.2
TIMP3P35625 RNU2-60P-201ENST00000517290 128 ntBASIC1.31□□□□□ -2.2
TIMP3P35625 MIR4421-201ENST00000578133 69 ntBASIC1.31□□□□□ -2.2
TIMP3P35625 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.31□□□□□ -2.2
TIMP3P35625 AL442644.1-201ENST00000454390 3105 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.3□□□□□ -2.2
TIMP3P35625 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.3□□□□□ -2.2
TIMP3P35625 SNORD115-34-201ENST00000362441 82 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 SNORD115-12-201ENST00000362583 82 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 SNORD115-29-201ENST00000362834 82 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 SNORD115-9-201ENST00000362912 82 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 SNORD115-21-201ENST00000362963 81 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 SNORD115-14-201ENST00000363090 81 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 SNORD115-13-201ENST00000363358 82 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 SNORD115-41-201ENST00000363608 82 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 SNORD115-11-201ENST00000363616 82 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 SNORD115-5-201ENST00000363633 82 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 SNORD115-39-201ENST00000363694 82 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 SNORD115-4-201ENST00000363810 82 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 SNORD115-16-201ENST00000363887 82 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 SNORD115-6-201ENST00000363942 82 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 SNORD115-42-201ENST00000364273 82 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 RNU6-309P-201ENST00000364573 106 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 SNORD115-15-201ENST00000364809 81 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 SNORD115-1-201ENST00000364961 82 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 SNORD115-26-201ENST00000365067 82 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 SNORD115-10-201ENST00000365073 81 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 Y_RNA.351-201ENST00000365436 96 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 SNORD115-43-201ENST00000365503 82 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 Y_RNA.370-201ENST00000365589 108 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 SNORD115-36-201ENST00000365629 82 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 SNORA27-201ENST00000384323 126 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.3□□□□□ -2.2
TIMP3P35625 MIR1304-201ENST00000408243 91 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 AL354695.1-201ENST00000427935 228 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 RPS26P48-201ENST00000491713 339 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 RNU5E-3P-201ENST00000515913 68 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 RNU6-322P-201ENST00000516010 103 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 RNU6-917P-201ENST00000516294 104 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 SNORA74.3-201ENST00000517108 154 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.3□□□□□ -2.2
TIMP3P35625 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.3□□□□□ -2.2
TIMP3P35625 SNORD115-40-201ENST00000606510 82 ntBASIC1.3□□□□□ -2.2
TIMP3P35625 Y_RNA.294-201ENST00000364916 102 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 183.4 ms