Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 RPS29P1-201ENST00000465274 159 ntBASIC0.78□□□□□ -2.28
HOXD13P35453 AC013244.2-201ENST00000603396 103 ntBASIC0.78□□□□□ -2.28
HOXD13P35453 MIR8062-201ENST00000621515 85 ntBASIC0.78□□□□□ -2.28
HOXD13P35453 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
HOXD13P35453 Y_RNA.176-201ENST00000363815 109 ntBASIC0.77□□□□□ -2.29
HOXD13P35453 Y_RNA.494-201ENST00000384432 111 ntBASIC0.77□□□□□ -2.29
HOXD13P35453 RNU6-1160P-201ENST00000384546 104 ntBASIC0.77□□□□□ -2.29
HOXD13P35453 MIR616-201ENST00000385293 97 ntBASIC0.77□□□□□ -2.29
HOXD13P35453 RNU6-205P-201ENST00000390858 107 ntBASIC0.77□□□□□ -2.29
HOXD13P35453 RNU6-1228P-201ENST00000391014 107 ntBASIC0.77□□□□□ -2.29
HOXD13P35453 CYP3A137P-201ENST00000562436 69 ntBASIC0.77□□□□□ -2.29
HOXD13P35453 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.77□□□□□ -2.29
HOXD13P35453 Y_RNA.199-201ENST00000364014 102 ntBASIC0.76□□□□□ -2.29
HOXD13P35453 RNU6-934P-201ENST00000365154 107 ntBASIC0.76□□□□□ -2.29
HOXD13P35453 Y_RNA.461-201ENST00000384263 103 ntBASIC0.76□□□□□ -2.29
HOXD13P35453 RNU6-125P-201ENST00000384505 107 ntBASIC0.76□□□□□ -2.29
HOXD13P35453 Y_RNA.572-201ENST00000384757 98 ntBASIC0.76□□□□□ -2.29
HOXD13P35453 SNORA79-201ENST00000408376 140 ntBASIC0.76□□□□□ -2.29
HOXD13P35453 AL606490.4-201ENST00000423117 127 ntBASIC0.76□□□□□ -2.29
HOXD13P35453 RNU7-96P-201ENST00000459535 64 ntBASIC0.76□□□□□ -2.29
HOXD13P35453 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
HOXD13P35453 Y_RNA.634-201ENST00000364811 113 ntBASIC0.75□□□□□ -2.29
HOXD13P35453 RNU6-1189P-201ENST00000383958 107 ntBASIC0.75□□□□□ -2.29
HOXD13P35453 Y_RNA.574-201ENST00000384766 95 ntBASIC0.75□□□□□ -2.29
HOXD13P35453 RNU1-119P-201ENST00000391122 165 ntBASIC0.75□□□□□ -2.29
HOXD13P35453 RNU6-938P-201ENST00000411285 103 ntBASIC0.75□□□□□ -2.29
HOXD13P35453 COX6CP6-201ENST00000490840 228 ntBASIC0.75□□□□□ -2.29
HOXD13P35453 RNU6-977P-201ENST00000516411 103 ntBASIC0.75□□□□□ -2.29
HOXD13P35453 MIR6835-201ENST00000621552 64 ntBASIC0.75□□□□□ -2.29
HOXD13P35453 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
HOXD13P35453 SNORD45.3-201ENST00000363836 72 ntBASIC0.74□□□□□ -2.29
HOXD13P35453 Y_RNA.224-201ENST00000364308 111 ntBASIC0.74□□□□□ -2.29
HOXD13P35453 SNORA1.1-201ENST00000364671 133 ntBASIC0.74□□□□□ -2.29
HOXD13P35453 Y_RNA.304-201ENST00000365011 112 ntBASIC0.74□□□□□ -2.29
HOXD13P35453 MIR548A2-201ENST00000384956 97 ntBASIC0.74□□□□□ -2.29
HOXD13P35453 SNORD77.3-201ENST00000391113 65 ntBASIC0.74□□□□□ -2.29
HOXD13P35453 AL606845.1-201ENST00000404881 255 ntBASIC0.74□□□□□ -2.29
HOXD13P35453 RNU7-62P-201ENST00000458856 62 ntBASIC0.74□□□□□ -2.29
HOXD13P35453 MTATP8P1-201ENST00000467115 207 ntBASIC0.74□□□□□ -2.29
HOXD13P35453 SNORD36C-201ENST00000516733 66 ntBASIC0.74□□□□□ -2.29
HOXD13P35453 AC011195.1-201ENST00000578177 177 ntBASIC0.74□□□□□ -2.29
HOXD13P35453 Y_RNA.812-201ENST00000610788 101 ntBASIC0.74□□□□□ -2.29
HOXD13P35453 Y_RNA.784-201ENST00000613803 101 ntBASIC0.74□□□□□ -2.29
HOXD13P35453 Y_RNA.787-201ENST00000616522 101 ntBASIC0.74□□□□□ -2.29
HOXD13P35453 Y_RNA.780-201ENST00000617336 101 ntBASIC0.74□□□□□ -2.29
HOXD13P35453 Y_RNA.801-201ENST00000619005 101 ntBASIC0.74□□□□□ -2.29
HOXD13P35453 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
HOXD13P35453 Y_RNA.145-201ENST00000363527 102 ntBASIC0.73□□□□□ -2.29
HOXD13P35453 Y_RNA.326-201ENST00000365176 113 ntBASIC0.73□□□□□ -2.29
HOXD13P35453 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
HOXD13P35453 Y_RNA.622-201ENST00000411091 108 ntBASIC0.73□□□□□ -2.29
HOXD13P35453 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.73□□□□□ -2.29
HOXD13P35453 MIR4282-201ENST00000583613 67 ntBASIC0.73□□□□□ -2.29
HOXD13P35453 MIR8055-201ENST00000610739 97 ntBASIC0.73□□□□□ -2.29
HOXD13P35453 Z97988.1-201ENST00000637697 135 ntBASIC0.73□□□□□ -2.29
HOXD13P35453 AC023934.1-201ENST00000574529 2389 ntBASIC0.72□□□□□ -2.29
HOXD13P35453 MIR302B-201ENST00000362188 73 ntBASIC0.72□□□□□ -2.29
HOXD13P35453 Y_RNA.66-201ENST00000362862 102 ntBASIC0.72□□□□□ -2.29
HOXD13P35453 Y_RNA.352-201ENST00000365439 102 ntBASIC0.72□□□□□ -2.29
HOXD13P35453 RNU6-484P-201ENST00000384016 107 ntBASIC0.72□□□□□ -2.29
HOXD13P35453 Y_RNA.512-201ENST00000384518 102 ntBASIC0.72□□□□□ -2.29
HOXD13P35453 MIR606-201ENST00000384851 96 ntBASIC0.72□□□□□ -2.29
HOXD13P35453 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.72□□□□□ -2.29
HOXD13P35453 MIR548J-201ENST00000408833 112 ntBASIC0.72□□□□□ -2.29
HOXD13P35453 AF228730.3-201ENST00000436691 102 ntBASIC0.72□□□□□ -2.29
HOXD13P35453 SNRPGP8-201ENST00000454064 226 ntBASIC0.72□□□□□ -2.29
HOXD13P35453 AC004812.1-201ENST00000540773 146 ntBASIC0.72□□□□□ -2.29
HOXD13P35453 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.72□□□□□ -2.29
HOXD13P35453 AL365265.1-201ENST00000621045 234 ntBASIC0.72□□□□□ -2.29
HOXD13P35453 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.71□□□□□ -2.3
HOXD13P35453 Y_RNA.91-201ENST00000363042 107 ntBASIC0.71□□□□□ -2.3
HOXD13P35453 Y_RNA.122-201ENST00000363331 96 ntBASIC0.71□□□□□ -2.3
HOXD13P35453 Y_RNA.262-201ENST00000364641 102 ntBASIC0.71□□□□□ -2.3
HOXD13P35453 MT-TT-201ENST00000387460 66 ntBASIC0.71□□□□□ -2.3
HOXD13P35453 RNU6-913P-201ENST00000390913 95 ntBASIC0.71□□□□□ -2.3
HOXD13P35453 RNA5SP261-201ENST00000410536 106 ntBASIC0.71□□□□□ -2.3
HOXD13P35453 AC244023.1-201ENST00000426884 112 ntBASIC0.71□□□□□ -2.3
HOXD13P35453 MIR18B-201ENST00000454574 71 ntBASIC0.71□□□□□ -2.3
HOXD13P35453 Y_RNA.673-201ENST00000516306 88 ntBASIC0.71□□□□□ -2.3
HOXD13P35453 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
HOXD13P35453 MIR4771-2-201ENST00000577758 74 ntBASIC0.71□□□□□ -2.3
HOXD13P35453 MIR4771-1-201ENST00000582617 74 ntBASIC0.71□□□□□ -2.3
HOXD13P35453 AC097639.2-201ENST00000603159 172 ntBASIC0.71□□□□□ -2.3
HOXD13P35453 Z83818.1-201ENST00000603584 150 ntBASIC0.71□□□□□ -2.3
HOXD13P35453 AC242498.1-201ENST00000604134 111 ntBASIC0.71□□□□□ -2.3
HOXD13P35453 Y_RNA.7-201ENST00000362352 102 ntBASIC0.7□□□□□ -2.3
HOXD13P35453 RNU6-103P-201ENST00000363686 107 ntBASIC0.7□□□□□ -2.3
HOXD13P35453 RNU6-728P-201ENST00000365375 104 ntBASIC0.7□□□□□ -2.3
HOXD13P35453 Y_RNA.354-201ENST00000365448 111 ntBASIC0.7□□□□□ -2.3
HOXD13P35453 RNU4-17P-201ENST00000365598 141 ntBASIC0.7□□□□□ -2.3
HOXD13P35453 Y_RNA.483-201ENST00000384380 101 ntBASIC0.7□□□□□ -2.3
HOXD13P35453 RNU6-1011P-201ENST00000384668 107 ntBASIC0.7□□□□□ -2.3
HOXD13P35453 MIR520F-201ENST00000384824 87 ntBASIC0.7□□□□□ -2.3
HOXD13P35453 MIR508-201ENST00000384857 115 ntBASIC0.7□□□□□ -2.3
HOXD13P35453 MIR548I3-201ENST00000408378 149 ntBASIC0.7□□□□□ -2.3
HOXD13P35453 RNA5SP222-201ENST00000411039 105 ntBASIC0.7□□□□□ -2.3
HOXD13P35453 SNORD83.1-201ENST00000411362 77 ntBASIC0.7□□□□□ -2.3
HOXD13P35453 AC090844.1-201ENST00000422019 156 ntBASIC0.7□□□□□ -2.3
HOXD13P35453 AC244098.3-201ENST00000424803 96 ntBASIC0.7□□□□□ -2.3
HOXD13P35453 MTND5P15-201ENST00000434246 349 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 209.9 ms