Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.43□□□□□ -2.48
COL4A5P29400 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.43□□□□□ -2.48
COL4A5P29400 Y_RNA.704-201ENST00000516851 102 ntBASIC-0.43□□□□□ -2.48
COL4A5P29400 MIR4790-201ENST00000577799 79 ntBASIC-0.43□□□□□ -2.48
COL4A5P29400 AC060780.3-201ENST00000589464 80 ntBASIC-0.43□□□□□ -2.48
COL4A5P29400 MIR30D-201ENST00000362283 70 ntBASIC-0.43□□□□□ -2.48
COL4A5P29400 Y_RNA.157-201ENST00000363638 102 ntBASIC-0.43□□□□□ -2.48
COL4A5P29400 RNU6-926P-201ENST00000384075 107 ntBASIC-0.43□□□□□ -2.48
COL4A5P29400 SNORD12C-201ENST00000386307 89 ntBASIC-0.43□□□□□ -2.48
COL4A5P29400 SNORD78.2-201ENST00000391076 69 ntBASIC-0.43□□□□□ -2.48
COL4A5P29400 RPS29P24-201ENST00000486345 171 ntBASIC-0.43□□□□□ -2.48
COL4A5P29400 RNU6-126P-201ENST00000516685 103 ntBASIC-0.43□□□□□ -2.48
COL4A5P29400 CR383656.4-201ENST00000546909 122 ntBASIC-0.43□□□□□ -2.48
COL4A5P29400 AC127455.1-201ENST00000565496 145 ntBASIC-0.43□□□□□ -2.48
COL4A5P29400 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.43□□□□□ -2.48
COL4A5P29400 MIR6082-201ENST00000613604 109 ntBASIC-0.43□□□□□ -2.48
COL4A5P29400 RNU6-801P-201ENST00000364087 105 ntBASIC-0.44□□□□□ -2.48
COL4A5P29400 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.44□□□□□ -2.48
COL4A5P29400 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.44□□□□□ -2.48
COL4A5P29400 AC091951.2-201ENST00000500762 203 ntBASIC-0.44□□□□□ -2.48
COL4A5P29400 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.44□□□□□ -2.48
COL4A5P29400 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.44□□□□□ -2.48
COL4A5P29400 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.44□□□□□ -2.48
COL4A5P29400 MIR548AD-201ENST00000584780 82 ntBASIC-0.44□□□□□ -2.48
COL4A5P29400 MIR4436A-201ENST00000585278 85 ntBASIC-0.44□□□□□ -2.48
COL4A5P29400 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.44□□□□□ -2.48
COL4A5P29400 RNU6-451P-201ENST00000362921 107 ntBASIC-0.45□□□□□ -2.48
COL4A5P29400 Y_RNA.559-201ENST00000384686 107 ntBASIC-0.45□□□□□ -2.48
COL4A5P29400 MIR548L-201ENST00000408303 86 ntBASIC-0.45□□□□□ -2.48
COL4A5P29400 MIR1278-201ENST00000408753 81 ntBASIC-0.45□□□□□ -2.48
COL4A5P29400 Y_RNA.605-201ENST00000410577 105 ntBASIC-0.45□□□□□ -2.48
COL4A5P29400 RPL21P38-201ENST00000418090 167 ntBASIC-0.45□□□□□ -2.48
COL4A5P29400 AF228730.4-201ENST00000421457 183 ntBASIC-0.45□□□□□ -2.48
COL4A5P29400 MTND1P2-201ENST00000430604 821 ntBASIC-0.45□□□□□ -2.48
COL4A5P29400 SNORD11-201ENST00000459124 84 ntBASIC-0.45□□□□□ -2.48
COL4A5P29400 RPS29P25-201ENST00000481709 171 ntBASIC-0.45□□□□□ -2.48
COL4A5P29400 RNU6-765P-201ENST00000516916 99 ntBASIC-0.45□□□□□ -2.48
COL4A5P29400 MTND5P34-201ENST00000568888 325 ntBASIC-0.45□□□□□ -2.48
COL4A5P29400 MIR3611-201ENST00000584484 83 ntBASIC-0.45□□□□□ -2.48
COL4A5P29400 AC124312.5-201ENST00000604451 268 ntBASIC-0.45□□□□□ -2.48
COL4A5P29400 AC063944.3-201ENST00000609969 533 ntBASIC-0.45□□□□□ -2.48
COL4A5P29400 uc_338.28-201ENST00000612082 187 ntBASIC-0.45□□□□□ -2.48
COL4A5P29400 U4.2-201ENST00000618561 85 ntBASIC-0.45□□□□□ -2.48
COL4A5P29400 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.46□□□□□ -2.48
COL4A5P29400 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.46□□□□□ -2.48
COL4A5P29400 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.46□□□□□ -2.48
COL4A5P29400 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.46□□□□□ -2.48
COL4A5P29400 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.46□□□□□ -2.48
COL4A5P29400 Y_RNA.482-201ENST00000384377 111 ntBASIC-0.46□□□□□ -2.48
COL4A5P29400 RNU4-30P-201ENST00000410245 143 ntBASIC-0.46□□□□□ -2.48
COL4A5P29400 RNU6-284P-201ENST00000411105 106 ntBASIC-0.46□□□□□ -2.48
COL4A5P29400 RNU7-25P-201ENST00000516544 62 ntBASIC-0.46□□□□□ -2.48
COL4A5P29400 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.46□□□□□ -2.48
COL4A5P29400 AC138749.4-201ENST00000563970 127 ntBASIC-0.46□□□□□ -2.48
COL4A5P29400 AL442067.1-201ENST00000613261 223 ntBASIC-0.46□□□□□ -2.48
COL4A5P29400 MIR342-201ENST00000362212 99 ntBASIC-0.46□□□□□ -2.48
COL4A5P29400 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.46□□□□□ -2.48
COL4A5P29400 Y_RNA.473-201ENST00000384333 102 ntBASIC-0.46□□□□□ -2.48
COL4A5P29400 MIR181A1-201ENST00000385026 110 ntBASIC-0.46□□□□□ -2.48
COL4A5P29400 RNU6-913P-201ENST00000390913 95 ntBASIC-0.46□□□□□ -2.48
COL4A5P29400 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.46□□□□□ -2.48
COL4A5P29400 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-0.46□□□□□ -2.48
COL4A5P29400 SUMO1P3-201ENST00000439961 304 ntBASIC-0.46□□□□□ -2.48
COL4A5P29400 RNU7-169P-201ENST00000459456 61 ntBASIC-0.46□□□□□ -2.48
COL4A5P29400 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.46□□□□□ -2.48
COL4A5P29400 RNU6-506P-201ENST00000516553 94 ntBASIC-0.46□□□□□ -2.48
COL4A5P29400 RNU6-1314P-201ENST00000517139 104 ntBASIC-0.46□□□□□ -2.48
COL4A5P29400 AC055872.1-201ENST00000570978 278 ntBASIC-0.46□□□□□ -2.48
COL4A5P29400 MIR4659A-201ENST00000580269 81 ntBASIC-0.46□□□□□ -2.48
COL4A5P29400 MIR4788-201ENST00000639104 80 ntBASIC-0.46□□□□□ -2.48
COL4A5P29400 AC073869.9-201ENST00000641610 120 ntBASIC-0.46□□□□□ -2.48
COL4A5P29400 MIR101-2-201ENST00000362195 79 ntBASIC-0.47□□□□□ -2.48
COL4A5P29400 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.47□□□□□ -2.48
COL4A5P29400 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.47□□□□□ -2.48
COL4A5P29400 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-0.47□□□□□ -2.48
COL4A5P29400 AC107399.1-201ENST00000451226 265 ntBASIC-0.47□□□□□ -2.48
COL4A5P29400 RNU7-141P-201ENST00000459304 62 ntBASIC-0.47□□□□□ -2.48
COL4A5P29400 RPL7P42-201ENST00000481005 679 ntBASIC-0.47□□□□□ -2.48
COL4A5P29400 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.47□□□□□ -2.48
COL4A5P29400 RNU6-1016P-201ENST00000516689 94 ntBASIC-0.47□□□□□ -2.48
COL4A5P29400 RNU6-365P-201ENST00000517113 106 ntBASIC-0.47□□□□□ -2.48
COL4A5P29400 RN7SKP295-201ENST00000517264 153 ntBASIC-0.47□□□□□ -2.48
COL4A5P29400 MIR3681-201ENST00000580089 72 ntBASIC-0.47□□□□□ -2.48
COL4A5P29400 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.47□□□□□ -2.48
COL4A5P29400 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.47□□□□□ -2.48
COL4A5P29400 RNU6-726P-201ENST00000364680 107 ntBASIC-0.48□□□□□ -2.49
COL4A5P29400 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.48□□□□□ -2.49
COL4A5P29400 Y_RNA.404-201ENST00000383978 102 ntBASIC-0.48□□□□□ -2.49
COL4A5P29400 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.48□□□□□ -2.49
COL4A5P29400 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.48□□□□□ -2.49
COL4A5P29400 MIR196A1-201ENST00000388006 70 ntBASIC-0.48□□□□□ -2.49
COL4A5P29400 SNORA75.1-201ENST00000391130 148 ntBASIC-0.48□□□□□ -2.49
COL4A5P29400 RPS3AP52-201ENST00000435639 297 ntBASIC-0.48□□□□□ -2.49
COL4A5P29400 AC131281.1-201ENST00000522984 164 ntBASIC-0.48□□□□□ -2.49
COL4A5P29400 AL133255.1-201ENST00000606374 441 ntBASIC-0.48□□□□□ -2.49
COL4A5P29400 AC011373.1-201ENST00000607270 237 ntBASIC-0.48□□□□□ -2.49
COL4A5P29400 AP001282.2-201ENST00000616149 309 ntBASIC-0.48□□□□□ -2.49
COL4A5P29400 AL662814.1-201ENST00000617364 121 ntBASIC-0.48□□□□□ -2.49
COL4A5P29400 AL162376.1-201ENST00000624117 175 ntBASIC-0.48□□□□□ -2.49
COL4A5P29400 MIR3974-201ENST00000637126 96 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms