Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AL162376.1-201ENST00000624117 175 ntBASIC-0.58□□□□□ -2.5
HLA-DMBP28068 TPTEP1-208ENST00000636884 213 ntBASIC-0.58□□□□□ -2.5
HLA-DMBP28068 MIR148A-201ENST00000362215 68 ntBASIC-0.59□□□□□ -2.5
HLA-DMBP28068 RNU6-726P-201ENST00000364680 107 ntBASIC-0.59□□□□□ -2.5
HLA-DMBP28068 SNORA72.4-201ENST00000384174 132 ntBASIC-0.59□□□□□ -2.5
HLA-DMBP28068 SNORA75.1-201ENST00000391130 148 ntBASIC-0.59□□□□□ -2.5
HLA-DMBP28068 SNORA26.6-201ENST00000391256 115 ntBASIC-0.59□□□□□ -2.5
HLA-DMBP28068 RNU6-998P-201ENST00000515894 101 ntBASIC-0.59□□□□□ -2.5
HLA-DMBP28068 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.59□□□□□ -2.5
HLA-DMBP28068 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.59□□□□□ -2.5
HLA-DMBP28068 RNU2-31P-201ENST00000516954 155 ntBASIC-0.59□□□□□ -2.5
HLA-DMBP28068 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.59□□□□□ -2.5
HLA-DMBP28068 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.59□□□□□ -2.5
HLA-DMBP28068 AC138749.4-201ENST00000563970 127 ntBASIC-0.59□□□□□ -2.5
HLA-DMBP28068 MIR4677-201ENST00000584153 80 ntBASIC-0.59□□□□□ -2.5
HLA-DMBP28068 AL021707.8-201ENST00000609428 183 ntBASIC-0.59□□□□□ -2.5
HLA-DMBP28068 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.59□□□□□ -2.5
HLA-DMBP28068 FTX_2.1-201ENST00000618816 94 ntBASIC-0.59□□□□□ -2.5
HLA-DMBP28068 MIR3974-201ENST00000637126 96 ntBASIC-0.59□□□□□ -2.5
HLA-DMBP28068 Y_RNA.339-201ENST00000365325 102 ntBASIC-0.6□□□□□ -2.51
HLA-DMBP28068 RNU6-708P-201ENST00000384217 107 ntBASIC-0.6□□□□□ -2.51
HLA-DMBP28068 MIR196A2-201ENST00000385189 110 ntBASIC-0.6□□□□□ -2.51
HLA-DMBP28068 MIR548F5-201ENST00000408421 86 ntBASIC-0.6□□□□□ -2.51
HLA-DMBP28068 RNU2-14P-201ENST00000411053 191 ntBASIC-0.6□□□□□ -2.51
HLA-DMBP28068 AC109327.2-201ENST00000448339 378 ntBASIC-0.6□□□□□ -2.51
HLA-DMBP28068 AC023449.1-201ENST00000454464 154 ntBASIC-0.6□□□□□ -2.51
HLA-DMBP28068 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.6□□□□□ -2.51
HLA-DMBP28068 SNORD36C-201ENST00000516733 66 ntBASIC-0.6□□□□□ -2.51
HLA-DMBP28068 RNU6-897P-201ENST00000517135 105 ntBASIC-0.6□□□□□ -2.51
HLA-DMBP28068 MIR378D2-201ENST00000580636 98 ntBASIC-0.6□□□□□ -2.51
HLA-DMBP28068 AC122108.2-201ENST00000611946 526 ntBASIC-0.6□□□□□ -2.51
HLA-DMBP28068 MIR6514-201ENST00000622549 70 ntBASIC-0.6□□□□□ -2.51
HLA-DMBP28068 MIR6717-201ENST00000622747 73 ntBASIC-0.6□□□□□ -2.51
HLA-DMBP28068 RNU6-653P-201ENST00000363074 106 ntBASIC-0.61□□□□□ -2.51
HLA-DMBP28068 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.61□□□□□ -2.51
HLA-DMBP28068 Y_RNA.402-201ENST00000383972 102 ntBASIC-0.61□□□□□ -2.51
HLA-DMBP28068 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.61□□□□□ -2.51
HLA-DMBP28068 MIR548A2-201ENST00000384956 97 ntBASIC-0.61□□□□□ -2.51
HLA-DMBP28068 RNA5SP237-201ENST00000410414 113 ntBASIC-0.61□□□□□ -2.51
HLA-DMBP28068 MTND4P19-201ENST00000446659 478 ntBASIC-0.61□□□□□ -2.51
HLA-DMBP28068 RNU7-4P-201ENST00000516961 62 ntBASIC-0.61□□□□□ -2.51
HLA-DMBP28068 AL133255.1-201ENST00000606374 441 ntBASIC-0.61□□□□□ -2.51
HLA-DMBP28068 AC063944.3-201ENST00000609969 533 ntBASIC-0.61□□□□□ -2.51
HLA-DMBP28068 AC015540.1-201ENST00000615828 501 ntBASIC-0.61□□□□□ -2.51
HLA-DMBP28068 PISRT1.1-201ENST00000616930 107 ntBASIC-0.61□□□□□ -2.51
HLA-DMBP28068 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.61□□□□□ -2.51
HLA-DMBP28068 uc_338.36-201ENST00000622331 158 ntBASIC-0.61□□□□□ -2.51
HLA-DMBP28068 AC078883.4-201ENST00000623218 367 ntBASIC-0.61□□□□□ -2.51
HLA-DMBP28068 RNU6-801P-201ENST00000364087 105 ntBASIC-0.62□□□□□ -2.51
HLA-DMBP28068 SNORD114-15-201ENST00000364687 72 ntBASIC-0.62□□□□□ -2.51
HLA-DMBP28068 SNORA22B-201ENST00000383876 138 ntBASIC-0.62□□□□□ -2.51
HLA-DMBP28068 RNU4-30P-201ENST00000410245 143 ntBASIC-0.62□□□□□ -2.51
HLA-DMBP28068 RNU6-284P-201ENST00000411105 106 ntBASIC-0.62□□□□□ -2.51
HLA-DMBP28068 RPL21P38-201ENST00000418090 167 ntBASIC-0.62□□□□□ -2.51
HLA-DMBP28068 snoU13.19-201ENST00000459148 104 ntBASIC-0.62□□□□□ -2.51
HLA-DMBP28068 AC144568.1-201ENST00000520139 137 ntBASIC-0.62□□□□□ -2.51
HLA-DMBP28068 AC141846.1-201ENST00000568348 142 ntBASIC-0.62□□□□□ -2.51
HLA-DMBP28068 uc_338.28-201ENST00000612082 187 ntBASIC-0.62□□□□□ -2.51
HLA-DMBP28068 RN7SL660P-201ENST00000614852 299 ntBASIC-0.62□□□□□ -2.51
HLA-DMBP28068 U6.92-201ENST00000636464 89 ntBASIC-0.62□□□□□ -2.51
HLA-DMBP28068 RNY4P14-201ENST00000363656 96 ntBASIC-0.63□□□□□ -2.51
HLA-DMBP28068 SNORD24-201ENST00000383884 75 ntBASIC-0.63□□□□□ -2.51
HLA-DMBP28068 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.63□□□□□ -2.51
HLA-DMBP28068 SNORA72.6-201ENST00000384520 129 ntBASIC-0.63□□□□□ -2.51
HLA-DMBP28068 RNU2-16P-201ENST00000410712 136 ntBASIC-0.63□□□□□ -2.51
HLA-DMBP28068 AL160004.2-201ENST00000432935 350 ntBASIC-0.63□□□□□ -2.51
HLA-DMBP28068 RNU6-911P-201ENST00000516523 104 ntBASIC-0.63□□□□□ -2.51
HLA-DMBP28068 MIR4662B-201ENST00000579498 81 ntBASIC-0.63□□□□□ -2.51
HLA-DMBP28068 MIR4788-201ENST00000639104 80 ntBASIC-0.63□□□□□ -2.51
HLA-DMBP28068 Y_RNA.27-201ENST00000362540 103 ntBASIC-0.64□□□□□ -2.51
HLA-DMBP28068 Y_RNA.88-201ENST00000363029 99 ntBASIC-0.64□□□□□ -2.51
HLA-DMBP28068 RNA5SP245-201ENST00000364239 121 ntBASIC-0.64□□□□□ -2.51
HLA-DMBP28068 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.64□□□□□ -2.51
HLA-DMBP28068 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.64□□□□□ -2.51
HLA-DMBP28068 MIR876-201ENST00000401147 81 ntBASIC-0.64□□□□□ -2.51
HLA-DMBP28068 RNA5SP261-201ENST00000410536 106 ntBASIC-0.64□□□□□ -2.51
HLA-DMBP28068 AC107399.1-201ENST00000451226 265 ntBASIC-0.64□□□□□ -2.51
HLA-DMBP28068 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.64□□□□□ -2.51
HLA-DMBP28068 RNU6-693P-201ENST00000516134 107 ntBASIC-0.64□□□□□ -2.51
HLA-DMBP28068 RNU6-506P-201ENST00000516553 94 ntBASIC-0.64□□□□□ -2.51
HLA-DMBP28068 MIR3145-201ENST00000580727 82 ntBASIC-0.64□□□□□ -2.51
HLA-DMBP28068 Y_RNA.89-201ENST00000363031 102 ntBASIC-0.65□□□□□ -2.51
HLA-DMBP28068 RNU6-597P-201ENST00000365620 102 ntBASIC-0.65□□□□□ -2.51
HLA-DMBP28068 RNU6-144P-201ENST00000383951 107 ntBASIC-0.65□□□□□ -2.51
HLA-DMBP28068 RNU6-949P-201ENST00000384040 107 ntBASIC-0.65□□□□□ -2.51
HLA-DMBP28068 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.65□□□□□ -2.51
HLA-DMBP28068 RNU6-30P-201ENST00000384561 107 ntBASIC-0.65□□□□□ -2.51
HLA-DMBP28068 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.65□□□□□ -2.51
HLA-DMBP28068 SNORD77.4-201ENST00000516158 81 ntBASIC-0.65□□□□□ -2.51
HLA-DMBP28068 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.65□□□□□ -2.51
HLA-DMBP28068 AL360085.1-201ENST00000604713 532 ntBASIC-0.65□□□□□ -2.51
HLA-DMBP28068 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.65□□□□□ -2.51
HLA-DMBP28068 AL162726.3-218ENST00000636401 95 ntBASIC-0.65□□□□□ -2.51
HLA-DMBP28068 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-0.65□□□□□ -2.51
HLA-DMBP28068 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.66□□□□□ -2.52
HLA-DMBP28068 RNU6-888P-201ENST00000363010 101 ntBASIC-0.66□□□□□ -2.52
HLA-DMBP28068 RNU6-510P-201ENST00000391239 108 ntBASIC-0.66□□□□□ -2.52
HLA-DMBP28068 Y_RNA.599-201ENST00000410489 109 ntBASIC-0.66□□□□□ -2.52
HLA-DMBP28068 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.66□□□□□ -2.52
HLA-DMBP28068 RNU6-120P-201ENST00000516077 103 ntBASIC-0.66□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 157.7 ms