Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 RNU6-913P-201ENST00000390913 95 ntBASIC0.78□□□□□ -2.28
RPA1P27694 RNU6-1190P-201ENST00000410811 104 ntBASIC0.78□□□□□ -2.28
RPA1P27694 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.78□□□□□ -2.28
RPA1P27694 HMGN1P33-201ENST00000432945 451 ntBASIC0.78□□□□□ -2.28
RPA1P27694 RNU6-693P-201ENST00000516134 107 ntBASIC0.78□□□□□ -2.28
RPA1P27694 Y_RNA.679-201ENST00000516416 91 ntBASIC0.78□□□□□ -2.28
RPA1P27694 SNORA18.4-201ENST00000516440 124 ntBASIC0.78□□□□□ -2.28
RPA1P27694 RNU7-43P-201ENST00000516554 64 ntBASIC0.78□□□□□ -2.28
RPA1P27694 RNU6-1007P-201ENST00000516586 107 ntBASIC0.78□□□□□ -2.28
RPA1P27694 RNU6-111P-201ENST00000517179 105 ntBASIC0.78□□□□□ -2.28
RPA1P27694 AC025627.3-201ENST00000582078 182 ntBASIC0.78□□□□□ -2.28
RPA1P27694 AC087685.1-201ENST00000587507 141 ntBASIC0.78□□□□□ -2.28
RPA1P27694 MIR6788-201ENST00000618842 66 ntBASIC0.78□□□□□ -2.28
RPA1P27694 Y_RNA.634-201ENST00000364811 113 ntBASIC0.77□□□□□ -2.29
RPA1P27694 Y_RNA.370-201ENST00000365589 108 ntBASIC0.77□□□□□ -2.29
RPA1P27694 RNU6-125P-201ENST00000384505 107 ntBASIC0.77□□□□□ -2.29
RPA1P27694 MIR605-201ENST00000385078 83 ntBASIC0.77□□□□□ -2.29
RPA1P27694 MIR100-201ENST00000385259 80 ntBASIC0.77□□□□□ -2.29
RPA1P27694 MIR802-201ENST00000390235 94 ntBASIC0.77□□□□□ -2.29
RPA1P27694 MIR548J-201ENST00000408833 112 ntBASIC0.77□□□□□ -2.29
RPA1P27694 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.77□□□□□ -2.29
RPA1P27694 AC015818.7-201ENST00000428754 109 ntBASIC0.77□□□□□ -2.29
RPA1P27694 AC087499.7-201ENST00000441958 109 ntBASIC0.77□□□□□ -2.29
RPA1P27694 U7.7-201ENST00000459276 60 ntBASIC0.77□□□□□ -2.29
RPA1P27694 RNU11-2P-201ENST00000516898 142 ntBASIC0.77□□□□□ -2.29
RPA1P27694 AC109810.1-201ENST00000534066 224 ntBASIC0.77□□□□□ -2.29
RPA1P27694 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.77□□□□□ -2.29
RPA1P27694 RNU6-94P-201ENST00000607728 107 ntBASIC0.77□□□□□ -2.29
RPA1P27694 SEPT14P17-201ENST00000617978 177 ntBASIC0.77□□□□□ -2.29
RPA1P27694 Y_RNA.37-201ENST00000362606 108 ntBASIC0.76□□□□□ -2.29
RPA1P27694 Y_RNA.288-201ENST00000364854 92 ntBASIC0.76□□□□□ -2.29
RPA1P27694 RNU6-1336P-201ENST00000383886 109 ntBASIC0.76□□□□□ -2.29
RPA1P27694 Y_RNA.447-201ENST00000384184 113 ntBASIC0.76□□□□□ -2.29
RPA1P27694 SNORD58.1-201ENST00000391313 66 ntBASIC0.76□□□□□ -2.29
RPA1P27694 AC244023.1-201ENST00000426884 112 ntBASIC0.76□□□□□ -2.29
RPA1P27694 AL138752.1-201ENST00000452964 351 ntBASIC0.76□□□□□ -2.29
RPA1P27694 AC036111.3-201ENST00000526389 112 ntBASIC0.76□□□□□ -2.29
RPA1P27694 AC131055.1-201ENST00000584626 316 ntBASIC0.76□□□□□ -2.29
RPA1P27694 AC242498.1-201ENST00000604134 111 ntBASIC0.76□□□□□ -2.29
RPA1P27694 AC062037.2-201ENST00000610137 73 ntBASIC0.76□□□□□ -2.29
RPA1P27694 AC243994.1-201ENST00000618627 109 ntBASIC0.76□□□□□ -2.29
RPA1P27694 7SK.10-201ENST00000621414 298 ntBASIC0.76□□□□□ -2.29
RPA1P27694 SNORD115-28-201ENST00000363931 81 ntBASIC0.75□□□□□ -2.29
RPA1P27694 RNA5SP48-201ENST00000363969 126 ntBASIC0.75□□□□□ -2.29
RPA1P27694 RNU6-47P-201ENST00000383866 107 ntBASIC0.75□□□□□ -2.29
RPA1P27694 MIR616-201ENST00000385293 97 ntBASIC0.75□□□□□ -2.29
RPA1P27694 MIR1287-201ENST00000408492 90 ntBASIC0.75□□□□□ -2.29
RPA1P27694 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.75□□□□□ -2.29
RPA1P27694 Y_RNA.626-201ENST00000411288 95 ntBASIC0.75□□□□□ -2.29
RPA1P27694 RNU7-45P-201ENST00000459460 63 ntBASIC0.75□□□□□ -2.29
RPA1P27694 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.75□□□□□ -2.29
RPA1P27694 RNU2-4P-201ENST00000606190 192 ntBASIC0.75□□□□□ -2.29
RPA1P27694 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.75□□□□□ -2.29
RPA1P27694 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.75□□□□□ -2.29
RPA1P27694 Y_RNA.20-201ENST00000362479 113 ntBASIC0.74□□□□□ -2.29
RPA1P27694 RNU6-369P-201ENST00000362515 102 ntBASIC0.74□□□□□ -2.29
RPA1P27694 RNU6-888P-201ENST00000363010 101 ntBASIC0.74□□□□□ -2.29
RPA1P27694 Y_RNA.241-201ENST00000364470 117 ntBASIC0.74□□□□□ -2.29
RPA1P27694 Y_RNA.350-201ENST00000365409 98 ntBASIC0.74□□□□□ -2.29
RPA1P27694 SNORD77.3-201ENST00000391113 65 ntBASIC0.74□□□□□ -2.29
RPA1P27694 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.74□□□□□ -2.29
RPA1P27694 AC113410.1-201ENST00000505029 247 ntBASIC0.74□□□□□ -2.29
RPA1P27694 AC022559.1-201ENST00000520905 205 ntBASIC0.74□□□□□ -2.29
RPA1P27694 AL353765.1-201ENST00000605514 183 ntBASIC0.74□□□□□ -2.29
RPA1P27694 AC106800.4-201ENST00000614905 153 ntBASIC0.74□□□□□ -2.29
RPA1P27694 AC023934.1-201ENST00000574529 2389 ntBASIC0.74□□□□□ -2.29
RPA1P27694 Y_RNA.224-201ENST00000364308 111 ntBASIC0.73□□□□□ -2.29
RPA1P27694 RNU6-597P-201ENST00000365620 102 ntBASIC0.73□□□□□ -2.29
RPA1P27694 SNORA24-201ENST00000384096 131 ntBASIC0.73□□□□□ -2.29
RPA1P27694 SNORA51.10-201ENST00000384418 136 ntBASIC0.73□□□□□ -2.29
RPA1P27694 MIR508-201ENST00000384857 115 ntBASIC0.73□□□□□ -2.29
RPA1P27694 RNU6-205P-201ENST00000390858 107 ntBASIC0.73□□□□□ -2.29
RPA1P27694 MTND5P15-201ENST00000434246 349 ntBASIC0.73□□□□□ -2.29
RPA1P27694 RNU6-958P-201ENST00000516995 106 ntBASIC0.73□□□□□ -2.29
RPA1P27694 AC133485.1-201ENST00000567176 124 ntBASIC0.73□□□□□ -2.29
RPA1P27694 AC138907.6-201ENST00000568401 126 ntBASIC0.73□□□□□ -2.29
RPA1P27694 MIR3129-201ENST00000581095 76 ntBASIC0.73□□□□□ -2.29
RPA1P27694 MIR151B-201ENST00000584249 96 ntBASIC0.73□□□□□ -2.29
RPA1P27694 MIR3149-201ENST00000584629 83 ntBASIC0.73□□□□□ -2.29
RPA1P27694 AL590095.2-201ENST00000604136 117 ntBASIC0.73□□□□□ -2.29
RPA1P27694 AC104465.1-201ENST00000611365 139 ntBASIC0.73□□□□□ -2.29
RPA1P27694 AL136317.1-201ENST00000612653 226 ntBASIC0.73□□□□□ -2.29
RPA1P27694 U4.1-201ENST00000620349 87 ntBASIC0.73□□□□□ -2.29
RPA1P27694 RNY1P11-201ENST00000363759 113 ntBASIC0.72□□□□□ -2.29
RPA1P27694 Y_RNA.199-201ENST00000364014 102 ntBASIC0.72□□□□□ -2.29
RPA1P27694 Y_RNA.452-201ENST00000384202 108 ntBASIC0.72□□□□□ -2.29
RPA1P27694 RNU6-196P-201ENST00000384315 107 ntBASIC0.72□□□□□ -2.29
RPA1P27694 Y_RNA.537-201ENST00000384626 109 ntBASIC0.72□□□□□ -2.29
RPA1P27694 AL606490.4-201ENST00000423117 127 ntBASIC0.72□□□□□ -2.29
RPA1P27694 AL035398.1-201ENST00000430869 322 ntBASIC0.72□□□□□ -2.29
RPA1P27694 RNU6-1299P-201ENST00000516316 100 ntBASIC0.72□□□□□ -2.29
RPA1P27694 AP003484.1-201ENST00000530974 250 ntBASIC0.72□□□□□ -2.29
RPA1P27694 AC004812.1-201ENST00000540773 146 ntBASIC0.72□□□□□ -2.29
RPA1P27694 AC097639.2-201ENST00000603159 172 ntBASIC0.72□□□□□ -2.29
RPA1P27694 AP000942.4-201ENST00000604811 241 ntBASIC0.72□□□□□ -2.29
RPA1P27694 Y_RNA.144-201ENST00000363521 113 ntBASIC0.71□□□□□ -2.3
RPA1P27694 Y_RNA.262-201ENST00000364641 102 ntBASIC0.71□□□□□ -2.3
RPA1P27694 RNU4-17P-201ENST00000365598 141 ntBASIC0.71□□□□□ -2.3
RPA1P27694 RNU6-463P-201ENST00000384340 107 ntBASIC0.71□□□□□ -2.3
RPA1P27694 RNU6-1110P-201ENST00000516462 101 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms