Protein–RNA interactions for Protein: P19388

POLR2E, DNA-directed RNA polymerases I, II, and III subunit RPABC1, humanhuman

Known RBP Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2EP19388 Y_RNA.641-201ENST00000459414 105 ntBASIC0.32□□□□□ -2.36
POLR2EP19388 RNU6-693P-201ENST00000516134 107 ntBASIC0.32□□□□□ -2.36
POLR2EP19388 RNU7-53P-201ENST00000516705 60 ntBASIC0.32□□□□□ -2.36
POLR2EP19388 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.32□□□□□ -2.36
POLR2EP19388 Y_RNA.804-201ENST00000615262 101 ntBASIC0.32□□□□□ -2.36
POLR2EP19388 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.32□□□□□ -2.36
POLR2EP19388 RNU6-888P-201ENST00000363010 101 ntBASIC0.31□□□□□ -2.36
POLR2EP19388 snoU2_19.2-201ENST00000363024 80 ntBASIC0.31□□□□□ -2.36
POLR2EP19388 Y_RNA.214-201ENST00000364201 112 ntBASIC0.31□□□□□ -2.36
POLR2EP19388 Y_RNA.293-201ENST00000364908 93 ntBASIC0.31□□□□□ -2.36
POLR2EP19388 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
POLR2EP19388 Y_RNA.389-201ENST00000383924 113 ntBASIC0.31□□□□□ -2.36
POLR2EP19388 Y_RNA.419-201ENST00000384041 102 ntBASIC0.31□□□□□ -2.36
POLR2EP19388 SNORD61-201ENST00000384252 73 ntBASIC0.31□□□□□ -2.36
POLR2EP19388 MIR548A2-201ENST00000384956 97 ntBASIC0.31□□□□□ -2.36
POLR2EP19388 SNORA53-201ENST00000391141 249 ntBASIC0.31□□□□□ -2.36
POLR2EP19388 SNORD100-201ENST00000408573 76 ntBASIC0.31□□□□□ -2.36
POLR2EP19388 AC022028.1-201ENST00000412054 408 ntBASIC0.31□□□□□ -2.36
POLR2EP19388 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.31□□□□□ -2.36
POLR2EP19388 RPS29P24-201ENST00000486345 171 ntBASIC0.31□□□□□ -2.36
POLR2EP19388 RNU6-365P-201ENST00000517113 106 ntBASIC0.31□□□□□ -2.36
POLR2EP19388 AC100767.1-201ENST00000528178 123 ntBASIC0.31□□□□□ -2.36
POLR2EP19388 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.31□□□□□ -2.36
POLR2EP19388 uc_338.6-201ENST00000613544 171 ntBASIC0.31□□□□□ -2.36
POLR2EP19388 Y_RNA.802-201ENST00000614892 130 ntBASIC0.31□□□□□ -2.36
POLR2EP19388 MIR6740-201ENST00000618268 113 ntBASIC0.31□□□□□ -2.36
POLR2EP19388 snoU18.1-201ENST00000629629 71 ntBASIC0.31□□□□□ -2.36
POLR2EP19388 MIRLET7D-201ENST00000362263 87 ntBASIC0.3□□□□□ -2.36
POLR2EP19388 RNU6-450P-201ENST00000364654 107 ntBASIC0.3□□□□□ -2.36
POLR2EP19388 Y_RNA.276-201ENST00000364732 109 ntBASIC0.3□□□□□ -2.36
POLR2EP19388 Y_RNA.541-201ENST00000384640 113 ntBASIC0.3□□□□□ -2.36
POLR2EP19388 AC015818.7-201ENST00000428754 109 ntBASIC0.3□□□□□ -2.36
POLR2EP19388 AC087499.7-201ENST00000441958 109 ntBASIC0.3□□□□□ -2.36
POLR2EP19388 snoU13.2-201ENST00000459201 104 ntBASIC0.3□□□□□ -2.36
POLR2EP19388 AC002350.1-201ENST00000490759 375 ntBASIC0.3□□□□□ -2.36
POLR2EP19388 SNORA68.3-201ENST00000515906 83 ntBASIC0.3□□□□□ -2.36
POLR2EP19388 RNU6-504P-201ENST00000516568 104 ntBASIC0.3□□□□□ -2.36
POLR2EP19388 AC090897.1-201ENST00000580909 226 ntBASIC0.3□□□□□ -2.36
POLR2EP19388 AL162730.1-201ENST00000605734 292 ntBASIC0.3□□□□□ -2.36
POLR2EP19388 AC037487.3-201ENST00000606668 112 ntBASIC0.3□□□□□ -2.36
POLR2EP19388 UBE2WP1-201ENST00000362030 340 ntBASIC0.29□□□□□ -2.36
POLR2EP19388 SNORA25.1-201ENST00000362326 128 ntBASIC0.29□□□□□ -2.36
POLR2EP19388 Y_RNA.394-201ENST00000383942 103 ntBASIC0.29□□□□□ -2.36
POLR2EP19388 RNU6-474P-201ENST00000384243 107 ntBASIC0.29□□□□□ -2.36
POLR2EP19388 RNU6-662P-201ENST00000384253 104 ntBASIC0.29□□□□□ -2.36
POLR2EP19388 MIR588-201ENST00000384900 83 ntBASIC0.29□□□□□ -2.36
POLR2EP19388 MIR563-201ENST00000385080 79 ntBASIC0.29□□□□□ -2.36
POLR2EP19388 MIR125B2-201ENST00000385128 89 ntBASIC0.29□□□□□ -2.36
POLR2EP19388 RNU2-70P-201ENST00000410718 179 ntBASIC0.29□□□□□ -2.36
POLR2EP19388 RNU2-55P-201ENST00000411146 174 ntBASIC0.29□□□□□ -2.36
POLR2EP19388 RNU6-602P-201ENST00000411155 105 ntBASIC0.29□□□□□ -2.36
POLR2EP19388 ELOCP20-201ENST00000422460 345 ntBASIC0.29□□□□□ -2.36
POLR2EP19388 Y_RNA.631-201ENST00000459607 101 ntBASIC0.29□□□□□ -2.36
POLR2EP19388 RNU6-988P-201ENST00000519081 107 ntBASIC0.29□□□□□ -2.36
POLR2EP19388 MIR924-201ENST00000638017 53 ntBASIC0.29□□□□□ -2.36
POLR2EP19388 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.28□□□□□ -2.36
POLR2EP19388 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.28□□□□□ -2.36
POLR2EP19388 RNU6-514P-201ENST00000384208 107 ntBASIC0.28□□□□□ -2.36
POLR2EP19388 Y_RNA.509-201ENST00000384506 99 ntBASIC0.28□□□□□ -2.36
POLR2EP19388 MIR215-201ENST00000384858 110 ntBASIC0.28□□□□□ -2.36
POLR2EP19388 RNU6-1319P-201ENST00000390855 104 ntBASIC0.28□□□□□ -2.36
POLR2EP19388 RNU6-747P-201ENST00000390928 104 ntBASIC0.28□□□□□ -2.36
POLR2EP19388 RNU6-241P-201ENST00000391148 104 ntBASIC0.28□□□□□ -2.36
POLR2EP19388 RNU6-1165P-201ENST00000410119 107 ntBASIC0.28□□□□□ -2.36
POLR2EP19388 RNU6-447P-201ENST00000410293 104 ntBASIC0.28□□□□□ -2.36
POLR2EP19388 RNU6-1118P-201ENST00000410382 104 ntBASIC0.28□□□□□ -2.36
POLR2EP19388 RNU6-1076P-201ENST00000410397 104 ntBASIC0.28□□□□□ -2.36
POLR2EP19388 RNU6-355P-201ENST00000410427 104 ntBASIC0.28□□□□□ -2.36
POLR2EP19388 RNU6-791P-201ENST00000410467 104 ntBASIC0.28□□□□□ -2.36
POLR2EP19388 RNU6-705P-201ENST00000410601 104 ntBASIC0.28□□□□□ -2.36
POLR2EP19388 RNU6-1100P-201ENST00000410691 104 ntBASIC0.28□□□□□ -2.36
POLR2EP19388 RNU6-860P-201ENST00000410860 104 ntBASIC0.28□□□□□ -2.36
POLR2EP19388 RNU6-1217P-201ENST00000411276 104 ntBASIC0.28□□□□□ -2.36
POLR2EP19388 RNU6-785P-201ENST00000411324 104 ntBASIC0.28□□□□□ -2.36
POLR2EP19388 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
POLR2EP19388 SNORD36C-201ENST00000516733 66 ntBASIC0.28□□□□□ -2.36
POLR2EP19388 SNORA40.15-201ENST00000516884 107 ntBASIC0.28□□□□□ -2.36
POLR2EP19388 AP003733.2-201ENST00000529409 171 ntBASIC0.28□□□□□ -2.36
POLR2EP19388 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.28□□□□□ -2.36
POLR2EP19388 SNORD92-201ENST00000585078 85 ntBASIC0.28□□□□□ -2.36
POLR2EP19388 AL008718.3-201ENST00000610217 321 ntBASIC0.28□□□□□ -2.36
POLR2EP19388 U6.90-201ENST00000614007 104 ntBASIC0.28□□□□□ -2.36
POLR2EP19388 U6.70-201ENST00000620287 104 ntBASIC0.28□□□□□ -2.36
POLR2EP19388 Y_RNA.128-201ENST00000363391 112 ntBASIC0.27□□□□□ -2.37
POLR2EP19388 SNORA1.1-201ENST00000364671 133 ntBASIC0.27□□□□□ -2.37
POLR2EP19388 Y_RNA.410-201ENST00000383992 113 ntBASIC0.27□□□□□ -2.37
POLR2EP19388 MIR626-201ENST00000385032 94 ntBASIC0.27□□□□□ -2.37
POLR2EP19388 SNORD77.3-201ENST00000391113 65 ntBASIC0.27□□□□□ -2.37
POLR2EP19388 SNORA26-201ENST00000391286 122 ntBASIC0.27□□□□□ -2.37
POLR2EP19388 AL731563.1-201ENST00000442202 214 ntBASIC0.27□□□□□ -2.37
POLR2EP19388 RNU7-185P-201ENST00000459215 60 ntBASIC0.27□□□□□ -2.37
POLR2EP19388 RNU7-96P-201ENST00000459535 64 ntBASIC0.27□□□□□ -2.37
POLR2EP19388 RNU6-1143P-201ENST00000516125 104 ntBASIC0.27□□□□□ -2.37
POLR2EP19388 AC092634.7-201ENST00000621022 103 ntBASIC0.27□□□□□ -2.37
POLR2EP19388 AC010332.2-201ENST00000613083 1904 ntBASIC0.26□□□□□ -2.37
POLR2EP19388 Y_RNA.19-201ENST00000362462 99 ntBASIC0.26□□□□□ -2.37
POLR2EP19388 Y_RNA.66-201ENST00000362862 102 ntBASIC0.26□□□□□ -2.37
POLR2EP19388 SNORA8.3-201ENST00000384679 139 ntBASIC0.26□□□□□ -2.37
POLR2EP19388 AL358176.2-201ENST00000425769 204 ntBASIC0.26□□□□□ -2.37
POLR2EP19388 AF228730.3-201ENST00000436691 102 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms