Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 snoR1.1-201ENST00000628177 80 ntBASIC-2.45□□□□□ -2.8
HMGA1P17096 SNORD115-32-201ENST00000364079 82 ntBASIC-2.46□□□□□ -2.8
HMGA1P17096 RNU6-454P-201ENST00000364292 107 ntBASIC-2.46□□□□□ -2.8
HMGA1P17096 Y_RNA.328-201ENST00000365208 113 ntBASIC-2.46□□□□□ -2.8
HMGA1P17096 AL603910.2-201ENST00000407268 136 ntBASIC-2.46□□□□□ -2.8
HMGA1P17096 RNU7-45P-201ENST00000459460 63 ntBASIC-2.46□□□□□ -2.8
HMGA1P17096 SNORA72.3-201ENST00000365074 132 ntBASIC-2.47□□□□□ -2.8
HMGA1P17096 RNU6-468P-201ENST00000384003 109 ntBASIC-2.47□□□□□ -2.8
HMGA1P17096 SNORA72-201ENST00000384339 132 ntBASIC-2.47□□□□□ -2.8
HMGA1P17096 MIR652-201ENST00000385278 98 ntBASIC-2.47□□□□□ -2.8
HMGA1P17096 AL078595.1-201ENST00000404458 226 ntBASIC-2.47□□□□□ -2.8
HMGA1P17096 AP003181.2-201ENST00000528941 181 ntBASIC-2.47□□□□□ -2.8
HMGA1P17096 AL137161.1-201ENST00000532231 390 ntBASIC-2.47□□□□□ -2.8
HMGA1P17096 MTND5P40-201ENST00000559945 246 ntBASIC-2.47□□□□□ -2.8
HMGA1P17096 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.47□□□□□ -2.8
HMGA1P17096 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-2.47□□□□□ -2.8
HMGA1P17096 RNU6-831P-201ENST00000384548 107 ntBASIC-2.48□□□□□ -2.81
HMGA1P17096 MIR519E-201ENST00000385075 84 ntBASIC-2.48□□□□□ -2.81
HMGA1P17096 MIR548O-201ENST00000408583 114 ntBASIC-2.48□□□□□ -2.81
HMGA1P17096 SNORD2-201ENST00000459163 69 ntBASIC-2.48□□□□□ -2.81
HMGA1P17096 SCARNA24.1-201ENST00000516465 137 ntBASIC-2.48□□□□□ -2.81
HMGA1P17096 RNY4-201ENST00000516507 96 ntBASIC-2.48□□□□□ -2.81
HMGA1P17096 AC092807.2-201ENST00000609367 243 ntBASIC-2.48□□□□□ -2.81
HMGA1P17096 SNORA27-201ENST00000384323 126 ntBASIC-2.49□□□□□ -2.81
HMGA1P17096 SNORD75.2-201ENST00000408784 58 ntBASIC-2.49□□□□□ -2.81
HMGA1P17096 MTCYBP8-201ENST00000422855 651 ntBASIC-2.49□□□□□ -2.81
HMGA1P17096 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-2.49□□□□□ -2.81
HMGA1P17096 MIR548H5-201ENST00000580314 60 ntBASIC-2.49□□□□□ -2.81
HMGA1P17096 PIGPP4-201ENST00000584447 307 ntBASIC-2.49□□□□□ -2.81
HMGA1P17096 AL163152.1-201ENST00000642001 374 ntBASIC-2.49□□□□□ -2.81
HMGA1P17096 SNORA69-201ENST00000383895 132 ntBASIC-2.5□□□□□ -2.81
HMGA1P17096 SNORA18-201ENST00000384416 132 ntBASIC-2.5□□□□□ -2.81
HMGA1P17096 RNU6-456P-201ENST00000384493 107 ntBASIC-2.5□□□□□ -2.81
HMGA1P17096 RNU6-592P-201ENST00000411333 103 ntBASIC-2.5□□□□□ -2.81
HMGA1P17096 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-2.5□□□□□ -2.81
HMGA1P17096 CLPTM1LP1-201ENST00000604519 484 ntBASIC-2.5□□□□□ -2.81
HMGA1P17096 AC087752.4-201ENST00000605911 462 ntBASIC-2.5□□□□□ -2.81
HMGA1P17096 RNU7-10P-201ENST00000607194 63 ntBASIC-2.5□□□□□ -2.81
HMGA1P17096 AL357078.3-201ENST00000607528 618 ntBASIC-2.5□□□□□ -2.81
HMGA1P17096 RNU6-653P-201ENST00000363074 106 ntBASIC-2.51□□□□□ -2.81
HMGA1P17096 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.51□□□□□ -2.81
HMGA1P17096 Y_RNA.785-201ENST00000384290 109 ntBASIC-2.51□□□□□ -2.81
HMGA1P17096 AC097510.1-201ENST00000510945 133 ntBASIC-2.51□□□□□ -2.81
HMGA1P17096 AL121655.1-201ENST00000605811 308 ntBASIC-2.51□□□□□ -2.81
HMGA1P17096 MIR6717-201ENST00000622747 73 ntBASIC-2.51□□□□□ -2.81
HMGA1P17096 MIR342-201ENST00000362212 99 ntBASIC-2.52□□□□□ -2.81
HMGA1P17096 RNU6-1209P-201ENST00000363655 107 ntBASIC-2.52□□□□□ -2.81
HMGA1P17096 Y_RNA.182-201ENST00000363880 111 ntBASIC-2.52□□□□□ -2.81
HMGA1P17096 RNY1P2-201ENST00000364820 117 ntBASIC-2.52□□□□□ -2.81
HMGA1P17096 RNY1P13-201ENST00000365030 105 ntBASIC-2.52□□□□□ -2.81
HMGA1P17096 RNU6-606P-201ENST00000384721 111 ntBASIC-2.52□□□□□ -2.81
HMGA1P17096 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-2.52□□□□□ -2.81
HMGA1P17096 RPS27AP14-201ENST00000422868 454 ntBASIC-2.52□□□□□ -2.81
HMGA1P17096 AC093423.1-201ENST00000440817 142 ntBASIC-2.52□□□□□ -2.81
HMGA1P17096 RNU7-138P-201ENST00000459479 64 ntBASIC-2.52□□□□□ -2.81
HMGA1P17096 MIR548AG2-201ENST00000581228 64 ntBASIC-2.52□□□□□ -2.81
HMGA1P17096 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.53□□□□□ -2.81
HMGA1P17096 Y_RNA.119-201ENST00000363301 96 ntBASIC-2.53□□□□□ -2.81
HMGA1P17096 RNU4-10P-201ENST00000364383 140 ntBASIC-2.53□□□□□ -2.81
HMGA1P17096 RNU6-400P-201ENST00000391173 106 ntBASIC-2.53□□□□□ -2.81
HMGA1P17096 MTCO2P16-201ENST00000436962 677 ntBASIC-2.53□□□□□ -2.81
HMGA1P17096 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.53□□□□□ -2.81
HMGA1P17096 MTCO3P23-201ENST00000561363 289 ntBASIC-2.53□□□□□ -2.81
HMGA1P17096 DISC2.1-201ENST00000612827 205 ntBASIC-2.53□□□□□ -2.81
HMGA1P17096 RNU6-560P-201ENST00000364007 108 ntBASIC-2.54□□□□□ -2.82
HMGA1P17096 Y_RNA.367-201ENST00000365544 101 ntBASIC-2.54□□□□□ -2.82
HMGA1P17096 RNY3P14-201ENST00000384309 102 ntBASIC-2.54□□□□□ -2.82
HMGA1P17096 Y_RNA.525-201ENST00000384570 113 ntBASIC-2.54□□□□□ -2.82
HMGA1P17096 SNORA40.5-201ENST00000391061 128 ntBASIC-2.54□□□□□ -2.82
HMGA1P17096 SNORD77.3-201ENST00000391113 65 ntBASIC-2.54□□□□□ -2.82
HMGA1P17096 AC124312.5-201ENST00000604451 268 ntBASIC-2.54□□□□□ -2.82
HMGA1P17096 RNY3P11-201ENST00000364153 102 ntBASIC-2.55□□□□□ -2.82
HMGA1P17096 Y_RNA.229-201ENST00000364347 113 ntBASIC-2.55□□□□□ -2.82
HMGA1P17096 Y_RNA.482-201ENST00000384377 111 ntBASIC-2.55□□□□□ -2.82
HMGA1P17096 MIR548A2-201ENST00000384956 97 ntBASIC-2.55□□□□□ -2.82
HMGA1P17096 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-2.55□□□□□ -2.82
HMGA1P17096 TRAJ51-201ENST00000504127 63 ntBASIC-2.55□□□□□ -2.82
HMGA1P17096 SNORD63.1-201ENST00000516178 80 ntBASIC-2.55□□□□□ -2.82
HMGA1P17096 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-2.55□□□□□ -2.82
HMGA1P17096 RNU6-1012P-201ENST00000516606 109 ntBASIC-2.55□□□□□ -2.82
HMGA1P17096 Y_RNA.14-201ENST00000362415 103 ntBASIC-2.56□□□□□ -2.82
HMGA1P17096 Y_RNA.243-201ENST00000364481 109 ntBASIC-2.56□□□□□ -2.82
HMGA1P17096 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.56□□□□□ -2.82
HMGA1P17096 RNU6-449P-201ENST00000383914 107 ntBASIC-2.56□□□□□ -2.82
HMGA1P17096 RNY3P4-201ENST00000384428 101 ntBASIC-2.56□□□□□ -2.82
HMGA1P17096 SNORA26.6-201ENST00000391256 115 ntBASIC-2.56□□□□□ -2.82
HMGA1P17096 SCOCP1-201ENST00000554676 349 ntBASIC-2.56□□□□□ -2.82
HMGA1P17096 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-2.56□□□□□ -2.82
HMGA1P17096 AL138960.2-201ENST00000625145 535 ntBASIC-2.56□□□□□ -2.82
HMGA1P17096 RNU5B-4P-201ENST00000363508 111 ntBASIC-2.57□□□□□ -2.82
HMGA1P17096 Y_RNA.634-201ENST00000364811 113 ntBASIC-2.57□□□□□ -2.82
HMGA1P17096 MRPL42P2-201ENST00000403169 426 ntBASIC-2.57□□□□□ -2.82
HMGA1P17096 Y_RNA.630-201ENST00000411370 108 ntBASIC-2.57□□□□□ -2.82
HMGA1P17096 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-2.57□□□□□ -2.82
HMGA1P17096 AL049861.1-201ENST00000603130 150 ntBASIC-2.57□□□□□ -2.82
HMGA1P17096 Y_RNA.302-201ENST00000364997 102 ntBASIC-2.58□□□□□ -2.82
HMGA1P17096 RNU6-571P-201ENST00000384128 107 ntBASIC-2.58□□□□□ -2.82
HMGA1P17096 MIR1278-201ENST00000408753 81 ntBASIC-2.58□□□□□ -2.82
HMGA1P17096 AC097635.1-201ENST00000450678 155 ntBASIC-2.58□□□□□ -2.82
HMGA1P17096 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-2.58□□□□□ -2.82
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms