Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 SNORD113-7-201ENST00000363762 77 ntBASIC-3.78□□□□□ -3.01
TOP2AP11388 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.78□□□□□ -3.01
TOP2AP11388 SNORA40.5-201ENST00000391061 128 ntBASIC-3.78□□□□□ -3.01
TOP2AP11388 SNORA25.14-201ENST00000516481 132 ntBASIC-3.78□□□□□ -3.01
TOP2AP11388 AC091144.1-201ENST00000519573 138 ntBASIC-3.78□□□□□ -3.01
TOP2AP11388 AC005771.1-201ENST00000585581 349 ntBASIC-3.78□□□□□ -3.01
TOP2AP11388 AC103591.3-201ENST00000608684 209 ntBASIC-3.78□□□□□ -3.01
TOP2AP11388 MIR6717-201ENST00000622747 73 ntBASIC-3.78□□□□□ -3.01
TOP2AP11388 RNU6-653P-201ENST00000363074 106 ntBASIC-3.79□□□□□ -3.02
TOP2AP11388 SNORD51.1-201ENST00000365405 77 ntBASIC-3.79□□□□□ -3.02
TOP2AP11388 AF228730.4-201ENST00000421457 183 ntBASIC-3.79□□□□□ -3.02
TOP2AP11388 AC073539.2-201ENST00000597113 165 ntBASIC-3.79□□□□□ -3.02
TOP2AP11388 AC005972.2-201ENST00000604690 348 ntBASIC-3.79□□□□□ -3.02
TOP2AP11388 Y_RNA.54-201ENST00000362766 105 ntBASIC-3.8□□□□□ -3.02
TOP2AP11388 RNU6-522P-201ENST00000364497 107 ntBASIC-3.8□□□□□ -3.02
TOP2AP11388 RNU6-524P-201ENST00000384270 107 ntBASIC-3.8□□□□□ -3.02
TOP2AP11388 SNORD77.3-201ENST00000391113 65 ntBASIC-3.8□□□□□ -3.02
TOP2AP11388 EEF1A1P40-201ENST00000412883 573 ntBASIC-3.8□□□□□ -3.02
TOP2AP11388 MTND2P20-201ENST00000440805 661 ntBASIC-3.8□□□□□ -3.02
TOP2AP11388 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-3.8□□□□□ -3.02
TOP2AP11388 RNU6-583P-201ENST00000516012 92 ntBASIC-3.8□□□□□ -3.02
TOP2AP11388 Y_RNA.75-201ENST00000362927 97 ntBASIC-3.8□□□□□ -3.02
TOP2AP11388 Y_RNA.353-201ENST00000365440 108 ntBASIC-3.8□□□□□ -3.02
TOP2AP11388 Y_RNA.449-201ENST00000384187 102 ntBASIC-3.8□□□□□ -3.02
TOP2AP11388 RNU6-102P-201ENST00000384485 104 ntBASIC-3.8□□□□□ -3.02
TOP2AP11388 Y_RNA.613-201ENST00000410726 97 ntBASIC-3.8□□□□□ -3.02
TOP2AP11388 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-3.8□□□□□ -3.02
TOP2AP11388 AL607023.1-201ENST00000620045 248 ntBASIC-3.8□□□□□ -3.02
TOP2AP11388 RNU6-777P-201ENST00000364265 104 ntBASIC-3.81□□□□□ -3.02
TOP2AP11388 Y_RNA.239-201ENST00000364444 113 ntBASIC-3.81□□□□□ -3.02
TOP2AP11388 RNU6-1317P-201ENST00000364582 104 ntBASIC-3.81□□□□□ -3.02
TOP2AP11388 Y_RNA.342-201ENST00000365352 113 ntBASIC-3.81□□□□□ -3.02
TOP2AP11388 TPTE2P1-204ENST00000435256 593 ntBASIC-3.81□□□□□ -3.02
TOP2AP11388 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-3.81□□□□□ -3.02
TOP2AP11388 AL669831.3-213ENST00000636676 183 ntBASIC-3.81□□□□□ -3.02
TOP2AP11388 SNORD114-4-201ENST00000363962 75 ntBASIC-3.82□□□□□ -3.02
TOP2AP11388 AC104072.1-201ENST00000568817 668 ntBASIC-3.82□□□□□ -3.02
TOP2AP11388 RNU6-827P-201ENST00000365553 106 ntBASIC-3.83□□□□□ -3.02
TOP2AP11388 RNU6-1005P-201ENST00000384519 107 ntBASIC-3.83□□□□□ -3.02
TOP2AP11388 Y_RNA.528-201ENST00000384575 108 ntBASIC-3.83□□□□□ -3.02
TOP2AP11388 Y_RNA.809-201ENST00000516058 95 ntBASIC-3.83□□□□□ -3.02
TOP2AP11388 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-3.83□□□□□ -3.02
TOP2AP11388 AC124312.5-201ENST00000604451 268 ntBASIC-3.83□□□□□ -3.02
TOP2AP11388 Y_RNA.248-201ENST00000364501 109 ntBASIC-3.84□□□□□ -3.02
TOP2AP11388 Y_RNA.396-201ENST00000383949 103 ntBASIC-3.84□□□□□ -3.02
TOP2AP11388 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-3.84□□□□□ -3.02
TOP2AP11388 SNORA27-201ENST00000384323 126 ntBASIC-3.85□□□□□ -3.03
TOP2AP11388 SNORA26.6-201ENST00000391256 115 ntBASIC-3.85□□□□□ -3.03
TOP2AP11388 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-3.85□□□□□ -3.03
TOP2AP11388 AC107905.1-201ENST00000616204 426 ntBASIC-3.85□□□□□ -3.03
TOP2AP11388 FGF7P2-201ENST00000332473 296 ntBASIC-3.85□□□□□ -3.03
TOP2AP11388 Y_RNA.419-201ENST00000384041 102 ntBASIC-3.85□□□□□ -3.03
TOP2AP11388 RNU6-258P-201ENST00000390884 101 ntBASIC-3.85□□□□□ -3.03
TOP2AP11388 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-3.85□□□□□ -3.03
TOP2AP11388 RNU7-195P-201ENST00000458793 62 ntBASIC-3.85□□□□□ -3.03
TOP2AP11388 Y_RNA.698-201ENST00000516798 118 ntBASIC-3.85□□□□□ -3.03
TOP2AP11388 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-3.85□□□□□ -3.03
TOP2AP11388 AC009878.1-201ENST00000621819 340 ntBASIC-3.85□□□□□ -3.03
TOP2AP11388 RNU6-289P-201ENST00000364093 107 ntBASIC-3.86□□□□□ -3.03
TOP2AP11388 Y_RNA.348-201ENST00000365403 103 ntBASIC-3.86□□□□□ -3.03
TOP2AP11388 SNORA20.2-201ENST00000383922 131 ntBASIC-3.86□□□□□ -3.03
TOP2AP11388 Y_RNA.513-201ENST00000384522 100 ntBASIC-3.86□□□□□ -3.03
TOP2AP11388 SNORD19-201ENST00000391191 68 ntBASIC-3.86□□□□□ -3.03
TOP2AP11388 ELOCP17-201ENST00000414751 326 ntBASIC-3.86□□□□□ -3.03
TOP2AP11388 RNU6-227P-201ENST00000362865 103 ntBASIC-3.87□□□□□ -3.03
TOP2AP11388 RNU6-179P-201ENST00000363350 107 ntBASIC-3.87□□□□□ -3.03
TOP2AP11388 RNU4-24P-201ENST00000364565 139 ntBASIC-3.87□□□□□ -3.03
TOP2AP11388 RNU6-1286P-201ENST00000383871 107 ntBASIC-3.87□□□□□ -3.03
TOP2AP11388 RNU6-456P-201ENST00000384493 107 ntBASIC-3.87□□□□□ -3.03
TOP2AP11388 Y_RNA.558-201ENST00000384685 113 ntBASIC-3.87□□□□□ -3.03
TOP2AP11388 RNU6-90P-201ENST00000606352 106 ntBASIC-3.87□□□□□ -3.03
TOP2AP11388 AC012409.4-201ENST00000612923 249 ntBASIC-3.87□□□□□ -3.03
TOP2AP11388 FTX_4.1-201ENST00000616291 147 ntBASIC-3.87□□□□□ -3.03
TOP2AP11388 RNU6-1290P-201ENST00000362957 109 ntBASIC-3.88□□□□□ -3.03
TOP2AP11388 RNU6-1086P-201ENST00000410930 100 ntBASIC-3.88□□□□□ -3.03
TOP2AP11388 RPS3AP52-201ENST00000435639 297 ntBASIC-3.88□□□□□ -3.03
TOP2AP11388 SNRPGP8-201ENST00000454064 226 ntBASIC-3.88□□□□□ -3.03
TOP2AP11388 AC073343.1-201ENST00000328239 651 ntBASIC-3.89□□□□□ -3.03
TOP2AP11388 RNU6-1122P-201ENST00000384449 107 ntBASIC-3.89□□□□□ -3.03
TOP2AP11388 MTND2P18-201ENST00000419962 1030 ntBASIC-3.89□□□□□ -3.03
TOP2AP11388 AC079140.5-201ENST00000507882 310 ntBASIC-3.89□□□□□ -3.03
TOP2AP11388 MIR4666A-201ENST00000580160 79 ntBASIC-3.89□□□□□ -3.03
TOP2AP11388 AC072046.2-201ENST00000618366 268 ntBASIC-3.89□□□□□ -3.03
TOP2AP11388 SNORD114-7-201ENST00000362520 77 ntBASIC-3.9□□□□□ -3.03
TOP2AP11388 RNU6-961P-201ENST00000363893 105 ntBASIC-3.9□□□□□ -3.03
TOP2AP11388 AC104850.1-201ENST00000435940 476 ntBASIC-3.9□□□□□ -3.03
TOP2AP11388 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-3.9□□□□□ -3.03
TOP2AP11388 RMST_3.1-201ENST00000611651 109 ntBASIC-3.9□□□□□ -3.03
TOP2AP11388 MIR519A1-201ENST00000385257 85 ntBASIC-3.9□□□□□ -3.03
TOP2AP11388 AL365203.2-201ENST00000423444 196 ntBASIC-3.9□□□□□ -3.03
TOP2AP11388 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-3.9□□□□□ -3.03
TOP2AP11388 AL133215.3-201ENST00000609801 448 ntBASIC-3.9□□□□□ -3.03
TOP2AP11388 U6.115-201ENST00000636045 103 ntBASIC-3.9□□□□□ -3.03
TOP2AP11388 SNORD65C-201ENST00000390962 71 ntBASIC-3.91□□□□□ -3.04
TOP2AP11388 RNU2-62P-201ENST00000410868 191 ntBASIC-3.91□□□□□ -3.04
TOP2AP11388 RNU6-762P-201ENST00000517107 102 ntBASIC-3.91□□□□□ -3.04
TOP2AP11388 AC090617.9-201ENST00000623751 147 ntBASIC-3.91□□□□□ -3.04
TOP2AP11388 AL589826.1-201ENST00000340697 249 ntBASIC-3.92□□□□□ -3.04
TOP2AP11388 Y_RNA.7-201ENST00000362352 102 ntBASIC-3.92□□□□□ -3.04
TOP2AP11388 RNU6-1034P-201ENST00000365335 101 ntBASIC-3.92□□□□□ -3.04
Retrieved 100 of 98,524 protein–RNA pairs in 207 ms