Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 MIR18B-201ENST00000454574 71 ntBASIC0.31□□□□□ -2.36
IGHV3-43DP0DP04 RNU7-56P-201ENST00000458744 62 ntBASIC0.31□□□□□ -2.36
IGHV3-43DP0DP04 SNORA68.3-201ENST00000515906 83 ntBASIC0.31□□□□□ -2.36
IGHV3-43DP0DP04 RNU6-1223P-201ENST00000517124 104 ntBASIC0.31□□□□□ -2.36
IGHV3-43DP0DP04 MIR5688-201ENST00000580619 83 ntBASIC0.31□□□□□ -2.36
IGHV3-43DP0DP04 MIR8055-201ENST00000610739 97 ntBASIC0.31□□□□□ -2.36
IGHV3-43DP0DP04 Y_RNA.26-201ENST00000362539 101 ntBASIC0.3□□□□□ -2.36
IGHV3-43DP0DP04 RNU6-888P-201ENST00000363010 101 ntBASIC0.3□□□□□ -2.36
IGHV3-43DP0DP04 RNU6-1309P-201ENST00000363305 108 ntBASIC0.3□□□□□ -2.36
IGHV3-43DP0DP04 Y_RNA.158-201ENST00000363651 101 ntBASIC0.3□□□□□ -2.36
IGHV3-43DP0DP04 SNORA8.3-201ENST00000384679 139 ntBASIC0.3□□□□□ -2.36
IGHV3-43DP0DP04 RNU6-1165P-201ENST00000410119 107 ntBASIC0.3□□□□□ -2.36
IGHV3-43DP0DP04 MTCO2P12-201ENST00000427426 682 ntBASIC0.3□□□□□ -2.36
IGHV3-43DP0DP04 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.3□□□□□ -2.36
IGHV3-43DP0DP04 AL138752.1-201ENST00000452964 351 ntBASIC0.3□□□□□ -2.36
IGHV3-43DP0DP04 RNU6-1132P-201ENST00000459214 107 ntBASIC0.3□□□□□ -2.36
IGHV3-43DP0DP04 RNU6-1143P-201ENST00000516125 104 ntBASIC0.3□□□□□ -2.36
IGHV3-43DP0DP04 RNU6-504P-201ENST00000516568 104 ntBASIC0.3□□□□□ -2.36
IGHV3-43DP0DP04 AP003733.2-201ENST00000529409 171 ntBASIC0.3□□□□□ -2.36
IGHV3-43DP0DP04 AC113195.1-201ENST00000579952 141 ntBASIC0.3□□□□□ -2.36
IGHV3-43DP0DP04 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
IGHV3-43DP0DP04 Y_RNA.64-201ENST00000362845 102 ntBASIC0.29□□□□□ -2.36
IGHV3-43DP0DP04 Y_RNA.152-201ENST00000363578 100 ntBASIC0.29□□□□□ -2.36
IGHV3-43DP0DP04 Y_RNA.229-201ENST00000364347 113 ntBASIC0.29□□□□□ -2.36
IGHV3-43DP0DP04 RNU1-133P-201ENST00000364867 167 ntBASIC0.29□□□□□ -2.36
IGHV3-43DP0DP04 RNU6-211P-201ENST00000384047 107 ntBASIC0.29□□□□□ -2.36
IGHV3-43DP0DP04 RNU6-364P-201ENST00000384387 107 ntBASIC0.29□□□□□ -2.36
IGHV3-43DP0DP04 SNORA26-201ENST00000391286 122 ntBASIC0.29□□□□□ -2.36
IGHV3-43DP0DP04 MIR548I3-201ENST00000408378 149 ntBASIC0.29□□□□□ -2.36
IGHV3-43DP0DP04 MIR1257-201ENST00000408490 117 ntBASIC0.29□□□□□ -2.36
IGHV3-43DP0DP04 RNU6-602P-201ENST00000411155 105 ntBASIC0.29□□□□□ -2.36
IGHV3-43DP0DP04 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.29□□□□□ -2.36
IGHV3-43DP0DP04 Y_RNA.711-201ENST00000516993 102 ntBASIC0.29□□□□□ -2.36
IGHV3-43DP0DP04 AC092634.7-201ENST00000621022 103 ntBASIC0.29□□□□□ -2.36
IGHV3-43DP0DP04 MIR6513-201ENST00000621188 64 ntBASIC0.29□□□□□ -2.36
IGHV3-43DP0DP04 AC134503.1-201ENST00000633048 54 ntBASIC0.29□□□□□ -2.36
IGHV3-43DP0DP04 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
IGHV3-43DP0DP04 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
IGHV3-43DP0DP04 UBE2WP1-201ENST00000362030 340 ntBASIC0.28□□□□□ -2.36
IGHV3-43DP0DP04 Y_RNA.7-201ENST00000362352 102 ntBASIC0.28□□□□□ -2.36
IGHV3-43DP0DP04 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
IGHV3-43DP0DP04 RNU6-342P-201ENST00000384521 104 ntBASIC0.28□□□□□ -2.36
IGHV3-43DP0DP04 Y_RNA.572-201ENST00000384757 98 ntBASIC0.28□□□□□ -2.36
IGHV3-43DP0DP04 MIR125B2-201ENST00000385128 89 ntBASIC0.28□□□□□ -2.36
IGHV3-43DP0DP04 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.28□□□□□ -2.36
IGHV3-43DP0DP04 MIR548P-201ENST00000408336 84 ntBASIC0.28□□□□□ -2.36
IGHV3-43DP0DP04 RNU2-70P-201ENST00000410718 179 ntBASIC0.28□□□□□ -2.36
IGHV3-43DP0DP04 snoU13.2-201ENST00000459201 104 ntBASIC0.28□□□□□ -2.36
IGHV3-43DP0DP04 RNU7-96P-201ENST00000459535 64 ntBASIC0.28□□□□□ -2.36
IGHV3-43DP0DP04 SERF1AP1-201ENST00000514575 187 ntBASIC0.28□□□□□ -2.36
IGHV3-43DP0DP04 RNU6-1299P-201ENST00000516316 100 ntBASIC0.28□□□□□ -2.36
IGHV3-43DP0DP04 SCARNA24.2-201ENST00000516968 130 ntBASIC0.28□□□□□ -2.36
IGHV3-43DP0DP04 AP001094.1-201ENST00000579805 193 ntBASIC0.28□□□□□ -2.36
IGHV3-43DP0DP04 MIR6734-201ENST00000621166 68 ntBASIC0.28□□□□□ -2.36
IGHV3-43DP0DP04 MIRLET7D-201ENST00000362263 87 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 Y_RNA.84-201ENST00000363011 104 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 Y_RNA.138-201ENST00000363462 102 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 RNU6-1289P-201ENST00000384431 106 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 MIR626-201ENST00000385032 94 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 RNU6-1319P-201ENST00000390855 104 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 RNU6-747P-201ENST00000390928 104 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 RNU6-679P-201ENST00000391003 106 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 SNORD77.3-201ENST00000391113 65 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 RNU6-241P-201ENST00000391148 104 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 RNU6-447P-201ENST00000410293 104 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 RNU6-1118P-201ENST00000410382 104 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 RNU6-1076P-201ENST00000410397 104 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 RNU6-355P-201ENST00000410427 104 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 RNU6-791P-201ENST00000410467 104 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 RNU6-705P-201ENST00000410601 104 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 RNU6-1100P-201ENST00000410691 104 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 RNU6-1190P-201ENST00000410811 104 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 RNU6-860P-201ENST00000410860 104 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 RNU6-1217P-201ENST00000411276 104 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 RNU6-785P-201ENST00000411324 104 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 AF228730.3-201ENST00000436691 102 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 MTND5P22-201ENST00000458380 195 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 RNU7-102P-201ENST00000458948 62 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 RNU2-11P-201ENST00000459191 187 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 RNU7-185P-201ENST00000459215 60 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 RNU6-998P-201ENST00000515894 101 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 RNA5SP436-201ENST00000516020 115 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 Y_RNA.676-201ENST00000516393 96 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 MIR4680-201ENST00000580906 66 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 AC008608.1-201ENST00000603910 127 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 U6.90-201ENST00000614007 104 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 U6.70-201ENST00000620287 104 ntBASIC0.27□□□□□ -2.37
IGHV3-43DP0DP04 MIR342-201ENST00000362212 99 ntBASIC0.26□□□□□ -2.37
IGHV3-43DP0DP04 Y_RNA.66-201ENST00000362862 102 ntBASIC0.26□□□□□ -2.37
IGHV3-43DP0DP04 Y_RNA.91-201ENST00000363042 107 ntBASIC0.26□□□□□ -2.37
IGHV3-43DP0DP04 SNORD100-201ENST00000408573 76 ntBASIC0.26□□□□□ -2.37
IGHV3-43DP0DP04 AC113618.1-201ENST00000416747 285 ntBASIC0.26□□□□□ -2.37
IGHV3-43DP0DP04 RNA5SP220-201ENST00000516298 104 ntBASIC0.26□□□□□ -2.37
IGHV3-43DP0DP04 RNU6-1338P-201ENST00000516328 91 ntBASIC0.26□□□□□ -2.37
IGHV3-43DP0DP04 RNU7-156P-201ENST00000517214 74 ntBASIC0.26□□□□□ -2.37
IGHV3-43DP0DP04 AC090897.1-201ENST00000580909 226 ntBASIC0.26□□□□□ -2.37
IGHV3-43DP0DP04 AC243829.6-201ENST00000612652 106 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms