Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RNU6-309P-201ENST00000364573 106 ntBASIC1.59□□□□□ -2.15
HOXC6P09630 RNU6-439P-201ENST00000384188 106 ntBASIC1.59□□□□□ -2.15
HOXC6P09630 RNU6-950P-201ENST00000384651 107 ntBASIC1.59□□□□□ -2.15
HOXC6P09630 MIR516B2-201ENST00000385190 85 ntBASIC1.59□□□□□ -2.15
HOXC6P09630 MIR891A-201ENST00000401237 79 ntBASIC1.59□□□□□ -2.15
HOXC6P09630 RNA5SP127-201ENST00000411051 133 ntBASIC1.59□□□□□ -2.15
HOXC6P09630 AC015922.2-201ENST00000435593 184 ntBASIC1.59□□□□□ -2.15
HOXC6P09630 RNU5E-3P-201ENST00000515913 68 ntBASIC1.59□□□□□ -2.15
HOXC6P09630 SNORD36C-201ENST00000516733 66 ntBASIC1.59□□□□□ -2.15
HOXC6P09630 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.59□□□□□ -2.15
HOXC6P09630 AP001328.1-201ENST00000528550 176 ntBASIC1.59□□□□□ -2.15
HOXC6P09630 AC131055.1-201ENST00000584626 316 ntBASIC1.59□□□□□ -2.15
HOXC6P09630 AC011603.4-201ENST00000611325 277 ntBASIC1.59□□□□□ -2.15
HOXC6P09630 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.58□□□□□ -2.16
HOXC6P09630 SNORD115-28-201ENST00000363931 81 ntBASIC1.58□□□□□ -2.16
HOXC6P09630 Y_RNA.261-201ENST00000364631 102 ntBASIC1.58□□□□□ -2.16
HOXC6P09630 SNORD113-1-201ENST00000365321 69 ntBASIC1.58□□□□□ -2.16
HOXC6P09630 MIR624-201ENST00000385217 97 ntBASIC1.58□□□□□ -2.16
HOXC6P09630 RNU6-938P-201ENST00000411285 103 ntBASIC1.58□□□□□ -2.16
HOXC6P09630 RNA5SP481-201ENST00000516814 122 ntBASIC1.58□□□□□ -2.16
HOXC6P09630 MIR3660-201ENST00000584845 100 ntBASIC1.58□□□□□ -2.16
HOXC6P09630 AL365222.1-201ENST00000614661 98 ntBASIC1.58□□□□□ -2.16
HOXC6P09630 AP001340.1-201ENST00000624405 217 ntBASIC1.58□□□□□ -2.16
HOXC6P09630 AC027279.3-201ENST00000625055 122 ntBASIC1.58□□□□□ -2.16
HOXC6P09630 SNORD3E-202ENST00000627253 216 ntBASIC1.58□□□□□ -2.16
HOXC6P09630 Y_RNA.37-201ENST00000362606 108 ntBASIC1.57□□□□□ -2.16
HOXC6P09630 RNU6-833P-201ENST00000363486 107 ntBASIC1.57□□□□□ -2.16
HOXC6P09630 SNORD114-22-201ENST00000365423 72 ntBASIC1.57□□□□□ -2.16
HOXC6P09630 Y_RNA.494-201ENST00000384432 111 ntBASIC1.57□□□□□ -2.16
HOXC6P09630 Y_RNA.525-201ENST00000384570 113 ntBASIC1.57□□□□□ -2.16
HOXC6P09630 PGBD4P5-201ENST00000445958 426 ntBASIC1.57□□□□□ -2.16
HOXC6P09630 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.57□□□□□ -2.16
HOXC6P09630 SUMO2P16-201ENST00000519475 264 ntBASIC1.57□□□□□ -2.16
HOXC6P09630 MIR6078-201ENST00000611069 100 ntBASIC1.57□□□□□ -2.16
HOXC6P09630 AC106754.2-201ENST00000623006 233 ntBASIC1.57□□□□□ -2.16
HOXC6P09630 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
HOXC6P09630 RNU6-235P-201ENST00000362644 107 ntBASIC1.56□□□□□ -2.16
HOXC6P09630 Y_RNA.71-201ENST00000362892 104 ntBASIC1.56□□□□□ -2.16
HOXC6P09630 Y_RNA.242-201ENST00000364473 110 ntBASIC1.56□□□□□ -2.16
HOXC6P09630 MIR526A1-201ENST00000384897 85 ntBASIC1.56□□□□□ -2.16
HOXC6P09630 RNU6-360P-201ENST00000390944 104 ntBASIC1.56□□□□□ -2.16
HOXC6P09630 MIR548I2-201ENST00000408348 149 ntBASIC1.56□□□□□ -2.16
HOXC6P09630 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.56□□□□□ -2.16
HOXC6P09630 HMGN2P32-201ENST00000444648 269 ntBASIC1.56□□□□□ -2.16
HOXC6P09630 Y_RNA.690-201ENST00000516603 95 ntBASIC1.56□□□□□ -2.16
HOXC6P09630 RNU6-1149P-201ENST00000516810 97 ntBASIC1.56□□□□□ -2.16
HOXC6P09630 RNU7-181P-201ENST00000517234 74 ntBASIC1.56□□□□□ -2.16
HOXC6P09630 AC134878.1-201ENST00000619901 243 ntBASIC1.56□□□□□ -2.16
HOXC6P09630 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.55□□□□□ -2.16
HOXC6P09630 RNU6-1292P-201ENST00000383856 107 ntBASIC1.55□□□□□ -2.16
HOXC6P09630 Y_RNA.466-201ENST00000384294 113 ntBASIC1.55□□□□□ -2.16
HOXC6P09630 RNU6-22P-201ENST00000384355 107 ntBASIC1.55□□□□□ -2.16
HOXC6P09630 RNU6-1117P-201ENST00000384525 104 ntBASIC1.55□□□□□ -2.16
HOXC6P09630 MIR660-201ENST00000385235 97 ntBASIC1.55□□□□□ -2.16
HOXC6P09630 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.55□□□□□ -2.16
HOXC6P09630 RNU4-57P-201ENST00000515980 135 ntBASIC1.55□□□□□ -2.16
HOXC6P09630 SCARNA15-202ENST00000516881 127 ntBASIC1.55□□□□□ -2.16
HOXC6P09630 MIR3121-201ENST00000579680 77 ntBASIC1.55□□□□□ -2.16
HOXC6P09630 AC103810.8-201ENST00000607347 118 ntBASIC1.55□□□□□ -2.16
HOXC6P09630 TUG1_4.1-201ENST00000619464 181 ntBASIC1.55□□□□□ -2.16
HOXC6P09630 Y_RNA.120-201ENST00000363304 110 ntBASIC1.54□□□□□ -2.16
HOXC6P09630 SNORD18B-201ENST00000365659 72 ntBASIC1.54□□□□□ -2.16
HOXC6P09630 SNORD38C-201ENST00000384381 69 ntBASIC1.54□□□□□ -2.16
HOXC6P09630 AC004223.1-201ENST00000479840 271 ntBASIC1.54□□□□□ -2.16
HOXC6P09630 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.54□□□□□ -2.16
HOXC6P09630 AL513423.1-201ENST00000621695 132 ntBASIC1.54□□□□□ -2.16
HOXC6P09630 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
HOXC6P09630 MIR424-201ENST00000362227 98 ntBASIC1.53□□□□□ -2.16
HOXC6P09630 MIR96-201ENST00000362288 78 ntBASIC1.53□□□□□ -2.16
HOXC6P09630 SNORA2.2-201ENST00000365473 135 ntBASIC1.53□□□□□ -2.16
HOXC6P09630 RNU6-1189P-201ENST00000383958 107 ntBASIC1.53□□□□□ -2.16
HOXC6P09630 Y_RNA.540-201ENST00000384638 111 ntBASIC1.53□□□□□ -2.16
HOXC6P09630 MIR194-1-201ENST00000384892 85 ntBASIC1.53□□□□□ -2.16
HOXC6P09630 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
HOXC6P09630 RNU7-107P-201ENST00000459121 61 ntBASIC1.53□□□□□ -2.16
HOXC6P09630 Y_RNA.651-201ENST00000459380 103 ntBASIC1.53□□□□□ -2.16
HOXC6P09630 RNA5SP236-201ENST00000516169 116 ntBASIC1.53□□□□□ -2.16
HOXC6P09630 AP003484.1-201ENST00000530974 250 ntBASIC1.53□□□□□ -2.16
HOXC6P09630 U7.2-201ENST00000607576 63 ntBASIC1.53□□□□□ -2.16
HOXC6P09630 RMST_2.1-201ENST00000617263 136 ntBASIC1.53□□□□□ -2.16
HOXC6P09630 MIR342-201ENST00000362212 99 ntBASIC1.52□□□□□ -2.17
HOXC6P09630 Y_RNA.114-201ENST00000363265 113 ntBASIC1.52□□□□□ -2.17
HOXC6P09630 Y_RNA.291-201ENST00000364886 113 ntBASIC1.52□□□□□ -2.17
HOXC6P09630 Y_RNA.410-201ENST00000383992 113 ntBASIC1.52□□□□□ -2.17
HOXC6P09630 Y_RNA.440-201ENST00000384120 114 ntBASIC1.52□□□□□ -2.17
HOXC6P09630 SNORA22C-201ENST00000384614 134 ntBASIC1.52□□□□□ -2.17
HOXC6P09630 SNORA40.6-201ENST00000391153 128 ntBASIC1.52□□□□□ -2.17
HOXC6P09630 U8.17-201ENST00000391292 132 ntBASIC1.52□□□□□ -2.17
HOXC6P09630 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.52□□□□□ -2.17
HOXC6P09630 RNU6-970P-201ENST00000516312 107 ntBASIC1.52□□□□□ -2.17
HOXC6P09630 Y_RNA.692-201ENST00000516627 105 ntBASIC1.52□□□□□ -2.17
HOXC6P09630 SNORA18.7-201ENST00000516910 131 ntBASIC1.52□□□□□ -2.17
HOXC6P09630 MIR5197-201ENST00000583721 112 ntBASIC1.52□□□□□ -2.17
HOXC6P09630 FAM106DP-201ENST00000586416 501 ntBASIC1.52□□□□□ -2.17
HOXC6P09630 AC108081.1-201ENST00000604358 221 ntBASIC1.52□□□□□ -2.17
HOXC6P09630 AL022345.2-201ENST00000606307 135 ntBASIC1.52□□□□□ -2.17
HOXC6P09630 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.52□□□□□ -2.17
HOXC6P09630 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.51□□□□□ -2.17
HOXC6P09630 Y_RNA.241-201ENST00000364470 117 ntBASIC1.51□□□□□ -2.17
HOXC6P09630 RNU1-93P-201ENST00000364704 169 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 181.4 ms