Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 MIR526A2-201ENST00000390198 65 ntBASIC0.26□□□□□ -2.37
HLA-DQA1P01909 SNORA53-201ENST00000391141 249 ntBASIC0.26□□□□□ -2.37
HLA-DQA1P01909 MIR938-201ENST00000401216 83 ntBASIC0.26□□□□□ -2.37
HLA-DQA1P01909 AF228730.3-201ENST00000436691 102 ntBASIC0.26□□□□□ -2.37
HLA-DQA1P01909 snoU13.2-201ENST00000459201 104 ntBASIC0.26□□□□□ -2.37
HLA-DQA1P01909 Y_RNA.631-201ENST00000459607 101 ntBASIC0.26□□□□□ -2.37
HLA-DQA1P01909 RPS29P24-201ENST00000486345 171 ntBASIC0.26□□□□□ -2.37
HLA-DQA1P01909 RNU6-365P-201ENST00000517113 106 ntBASIC0.26□□□□□ -2.37
HLA-DQA1P01909 RNU6-988P-201ENST00000519081 107 ntBASIC0.26□□□□□ -2.37
HLA-DQA1P01909 AC131281.1-201ENST00000522984 164 ntBASIC0.26□□□□□ -2.37
HLA-DQA1P01909 MIR4662B-201ENST00000579498 81 ntBASIC0.26□□□□□ -2.37
HLA-DQA1P01909 Y_RNA.802-201ENST00000614892 130 ntBASIC0.26□□□□□ -2.37
HLA-DQA1P01909 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.25□□□□□ -2.37
HLA-DQA1P01909 MIRLET7D-201ENST00000362263 87 ntBASIC0.25□□□□□ -2.37
HLA-DQA1P01909 Y_RNA.216-201ENST00000364205 93 ntBASIC0.25□□□□□ -2.37
HLA-DQA1P01909 Y_RNA.269-201ENST00000364685 89 ntBASIC0.25□□□□□ -2.37
HLA-DQA1P01909 SNORD24-201ENST00000383884 75 ntBASIC0.25□□□□□ -2.37
HLA-DQA1P01909 RNU6-514P-201ENST00000384208 107 ntBASIC0.25□□□□□ -2.37
HLA-DQA1P01909 MIR125B2-201ENST00000385128 89 ntBASIC0.25□□□□□ -2.37
HLA-DQA1P01909 RNU6-1165P-201ENST00000410119 107 ntBASIC0.25□□□□□ -2.37
HLA-DQA1P01909 AC022028.1-201ENST00000412054 408 ntBASIC0.25□□□□□ -2.37
HLA-DQA1P01909 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.25□□□□□ -2.37
HLA-DQA1P01909 MIR18B-201ENST00000454574 71 ntBASIC0.25□□□□□ -2.37
HLA-DQA1P01909 MTND5P22-201ENST00000458380 195 ntBASIC0.25□□□□□ -2.37
HLA-DQA1P01909 RNU7-185P-201ENST00000459215 60 ntBASIC0.25□□□□□ -2.37
HLA-DQA1P01909 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.25□□□□□ -2.37
HLA-DQA1P01909 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.25□□□□□ -2.37
HLA-DQA1P01909 AC006006.1-201ENST00000603082 144 ntBASIC0.25□□□□□ -2.37
HLA-DQA1P01909 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.25□□□□□ -2.37
HLA-DQA1P01909 AC243829.6-201ENST00000612652 106 ntBASIC0.25□□□□□ -2.37
HLA-DQA1P01909 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.25□□□□□ -2.37
HLA-DQA1P01909 Y_RNA.7-201ENST00000362352 102 ntBASIC0.24□□□□□ -2.37
HLA-DQA1P01909 RNU6-888P-201ENST00000363010 101 ntBASIC0.24□□□□□ -2.37
HLA-DQA1P01909 Y_RNA.138-201ENST00000363462 102 ntBASIC0.24□□□□□ -2.37
HLA-DQA1P01909 Y_RNA.229-201ENST00000364347 113 ntBASIC0.24□□□□□ -2.37
HLA-DQA1P01909 SNORA63C-201ENST00000364578 129 ntBASIC0.24□□□□□ -2.37
HLA-DQA1P01909 SNORA1.1-201ENST00000364671 133 ntBASIC0.24□□□□□ -2.37
HLA-DQA1P01909 RNU6-211P-201ENST00000384047 107 ntBASIC0.24□□□□□ -2.37
HLA-DQA1P01909 RNU6-364P-201ENST00000384387 107 ntBASIC0.24□□□□□ -2.37
HLA-DQA1P01909 MIR518E-201ENST00000385252 88 ntBASIC0.24□□□□□ -2.37
HLA-DQA1P01909 MTND4LP30-201ENST00000454092 297 ntBASIC0.24□□□□□ -2.37
HLA-DQA1P01909 RNU7-102P-201ENST00000458948 62 ntBASIC0.24□□□□□ -2.37
HLA-DQA1P01909 RNU2-11P-201ENST00000459191 187 ntBASIC0.24□□□□□ -2.37
HLA-DQA1P01909 AC002350.1-201ENST00000490759 375 ntBASIC0.24□□□□□ -2.37
HLA-DQA1P01909 RNU6-504P-201ENST00000516568 104 ntBASIC0.24□□□□□ -2.37
HLA-DQA1P01909 RNU7-53P-201ENST00000516705 60 ntBASIC0.24□□□□□ -2.37
HLA-DQA1P01909 SCARNA24.2-201ENST00000516968 130 ntBASIC0.24□□□□□ -2.37
HLA-DQA1P01909 RNU7-156P-201ENST00000517214 74 ntBASIC0.24□□□□□ -2.37
HLA-DQA1P01909 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.24□□□□□ -2.37
HLA-DQA1P01909 AP003733.2-201ENST00000529409 171 ntBASIC0.24□□□□□ -2.37
HLA-DQA1P01909 AC113195.1-201ENST00000579952 141 ntBASIC0.24□□□□□ -2.37
HLA-DQA1P01909 AC090897.1-201ENST00000580909 226 ntBASIC0.24□□□□□ -2.37
HLA-DQA1P01909 SNORA4-201ENST00000584302 138 ntBASIC0.24□□□□□ -2.37
HLA-DQA1P01909 AC037487.3-201ENST00000606668 112 ntBASIC0.24□□□□□ -2.37
HLA-DQA1P01909 MIR6515-201ENST00000619843 57 ntBASIC0.24□□□□□ -2.37
HLA-DQA1P01909 AC092634.7-201ENST00000621022 103 ntBASIC0.24□□□□□ -2.37
HLA-DQA1P01909 AL160413.1-201ENST00000622780 310 ntBASIC0.24□□□□□ -2.37
HLA-DQA1P01909 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
HLA-DQA1P01909 MIR103A1-201ENST00000362165 78 ntBASIC0.23□□□□□ -2.37
HLA-DQA1P01909 MIR342-201ENST00000362212 99 ntBASIC0.23□□□□□ -2.37
HLA-DQA1P01909 Y_RNA.66-201ENST00000362862 102 ntBASIC0.23□□□□□ -2.37
HLA-DQA1P01909 Y_RNA.84-201ENST00000363011 104 ntBASIC0.23□□□□□ -2.37
HLA-DQA1P01909 Y_RNA.91-201ENST00000363042 107 ntBASIC0.23□□□□□ -2.37
HLA-DQA1P01909 Y_RNA.128-201ENST00000363391 112 ntBASIC0.23□□□□□ -2.37
HLA-DQA1P01909 RNA5SP517-201ENST00000364724 117 ntBASIC0.23□□□□□ -2.37
HLA-DQA1P01909 Y_RNA.455-201ENST00000384230 98 ntBASIC0.23□□□□□ -2.37
HLA-DQA1P01909 MIR626-201ENST00000385032 94 ntBASIC0.23□□□□□ -2.37
HLA-DQA1P01909 MT-TT-201ENST00000387460 66 ntBASIC0.23□□□□□ -2.37
HLA-DQA1P01909 RNU6-1319P-201ENST00000390855 104 ntBASIC0.23□□□□□ -2.37
HLA-DQA1P01909 RNU6-747P-201ENST00000390928 104 ntBASIC0.23□□□□□ -2.37
HLA-DQA1P01909 RNU6-241P-201ENST00000391148 104 ntBASIC0.23□□□□□ -2.37
HLA-DQA1P01909 SNORD100-201ENST00000408573 76 ntBASIC0.23□□□□□ -2.37
HLA-DQA1P01909 RNU6-447P-201ENST00000410293 104 ntBASIC0.23□□□□□ -2.37
HLA-DQA1P01909 RNU6-1118P-201ENST00000410382 104 ntBASIC0.23□□□□□ -2.37
HLA-DQA1P01909 RNU6-1076P-201ENST00000410397 104 ntBASIC0.23□□□□□ -2.37
HLA-DQA1P01909 RNU6-355P-201ENST00000410427 104 ntBASIC0.23□□□□□ -2.37
HLA-DQA1P01909 RNU6-791P-201ENST00000410467 104 ntBASIC0.23□□□□□ -2.37
HLA-DQA1P01909 RNU6-705P-201ENST00000410601 104 ntBASIC0.23□□□□□ -2.37
HLA-DQA1P01909 RNU6-1100P-201ENST00000410691 104 ntBASIC0.23□□□□□ -2.37
HLA-DQA1P01909 RNU6-860P-201ENST00000410860 104 ntBASIC0.23□□□□□ -2.37
HLA-DQA1P01909 RNU6-1217P-201ENST00000411276 104 ntBASIC0.23□□□□□ -2.37
HLA-DQA1P01909 RNU6-785P-201ENST00000411324 104 ntBASIC0.23□□□□□ -2.37
HLA-DQA1P01909 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.23□□□□□ -2.37
HLA-DQA1P01909 AL731563.1-201ENST00000442202 214 ntBASIC0.23□□□□□ -2.37
HLA-DQA1P01909 SNRPGP8-201ENST00000454064 226 ntBASIC0.23□□□□□ -2.37
HLA-DQA1P01909 U6.90-201ENST00000614007 104 ntBASIC0.23□□□□□ -2.37
HLA-DQA1P01909 U6.70-201ENST00000620287 104 ntBASIC0.23□□□□□ -2.37
HLA-DQA1P01909 UBE2WP1-201ENST00000362030 340 ntBASIC0.22□□□□□ -2.37
HLA-DQA1P01909 MIR30D-201ENST00000362283 70 ntBASIC0.22□□□□□ -2.37
HLA-DQA1P01909 SNORD44.1-201ENST00000363202 61 ntBASIC0.22□□□□□ -2.37
HLA-DQA1P01909 Y_RNA.117-201ENST00000363294 101 ntBASIC0.22□□□□□ -2.37
HLA-DQA1P01909 Y_RNA.158-201ENST00000363651 101 ntBASIC0.22□□□□□ -2.37
HLA-DQA1P01909 RNU4-45P-201ENST00000365469 141 ntBASIC0.22□□□□□ -2.37
HLA-DQA1P01909 RNU6-342P-201ENST00000384521 104 ntBASIC0.22□□□□□ -2.37
HLA-DQA1P01909 SNORA8.3-201ENST00000384679 139 ntBASIC0.22□□□□□ -2.37
HLA-DQA1P01909 MIR563-201ENST00000385080 79 ntBASIC0.22□□□□□ -2.37
HLA-DQA1P01909 SNORD77.3-201ENST00000391113 65 ntBASIC0.22□□□□□ -2.37
HLA-DQA1P01909 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.22□□□□□ -2.37
HLA-DQA1P01909 AL117351.2-201ENST00000513571 157 ntBASIC0.22□□□□□ -2.37
HLA-DQA1P01909 SERF1AP1-201ENST00000514575 187 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms