Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.83□□□□□ -2.28
PDGFBP01127 MIR4643-201ENST00000577473 78 ntBASIC0.83□□□□□ -2.28
PDGFBP01127 MIR4711-201ENST00000578274 70 ntBASIC0.83□□□□□ -2.28
PDGFBP01127 MIR4653-201ENST00000585107 83 ntBASIC0.83□□□□□ -2.28
PDGFBP01127 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.83□□□□□ -2.28
PDGFBP01127 MIR6835-201ENST00000621552 64 ntBASIC0.83□□□□□ -2.28
PDGFBP01127 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.83□□□□□ -2.28
PDGFBP01127 MTND1P7-201ENST00000632801 297 ntBASIC0.83□□□□□ -2.28
PDGFBP01127 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
PDGFBP01127 MIR330-201ENST00000362196 94 ntBASIC0.82□□□□□ -2.28
PDGFBP01127 Y_RNA.162-201ENST00000363683 102 ntBASIC0.82□□□□□ -2.28
PDGFBP01127 RNU6-472P-201ENST00000384299 107 ntBASIC0.82□□□□□ -2.28
PDGFBP01127 MIR526A2-201ENST00000390198 65 ntBASIC0.82□□□□□ -2.28
PDGFBP01127 SNORD89-201ENST00000390981 114 ntBASIC0.82□□□□□ -2.28
PDGFBP01127 MIR548F4-201ENST00000408515 105 ntBASIC0.82□□□□□ -2.28
PDGFBP01127 RNU2-70P-201ENST00000410718 179 ntBASIC0.82□□□□□ -2.28
PDGFBP01127 AL138752.1-201ENST00000452964 351 ntBASIC0.82□□□□□ -2.28
PDGFBP01127 PSMC1P5-201ENST00000512850 177 ntBASIC0.82□□□□□ -2.28
PDGFBP01127 RNU4-57P-201ENST00000515980 135 ntBASIC0.82□□□□□ -2.28
PDGFBP01127 SNORD77.4-201ENST00000516158 81 ntBASIC0.82□□□□□ -2.28
PDGFBP01127 RNU6-197P-201ENST00000516680 100 ntBASIC0.82□□□□□ -2.28
PDGFBP01127 AL117187.1-201ENST00000555482 181 ntBASIC0.82□□□□□ -2.28
PDGFBP01127 AC131055.1-201ENST00000584626 316 ntBASIC0.82□□□□□ -2.28
PDGFBP01127 AL021707.8-201ENST00000609428 183 ntBASIC0.82□□□□□ -2.28
PDGFBP01127 SEPT14P17-201ENST00000617978 177 ntBASIC0.82□□□□□ -2.28
PDGFBP01127 AL365265.1-201ENST00000621045 234 ntBASIC0.82□□□□□ -2.28
PDGFBP01127 AL442644.1-201ENST00000454390 3105 ntBASIC0.81□□□□□ -2.28
PDGFBP01127 Y_RNA.65-201ENST00000362846 100 ntBASIC0.81□□□□□ -2.28
PDGFBP01127 snoU2_19.4-201ENST00000364329 80 ntBASIC0.81□□□□□ -2.28
PDGFBP01127 SNORA1.2-201ENST00000365189 134 ntBASIC0.81□□□□□ -2.28
PDGFBP01127 SNORD61-201ENST00000384252 73 ntBASIC0.81□□□□□ -2.28
PDGFBP01127 RNU6-205P-201ENST00000390858 107 ntBASIC0.81□□□□□ -2.28
PDGFBP01127 AL606845.1-201ENST00000404881 255 ntBASIC0.81□□□□□ -2.28
PDGFBP01127 RNU6-994P-201ENST00000410507 111 ntBASIC0.81□□□□□ -2.28
PDGFBP01127 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.81□□□□□ -2.28
PDGFBP01127 AC107297.1-201ENST00000459991 176 ntBASIC0.81□□□□□ -2.28
PDGFBP01127 SCARNA8-201ENST00000515924 131 ntBASIC0.81□□□□□ -2.28
PDGFBP01127 RNU6-830P-201ENST00000516353 107 ntBASIC0.81□□□□□ -2.28
PDGFBP01127 SCARNA15.1-201ENST00000516384 125 ntBASIC0.81□□□□□ -2.28
PDGFBP01127 RNU6-365P-201ENST00000517113 106 ntBASIC0.81□□□□□ -2.28
PDGFBP01127 AC007751.1-201ENST00000529260 376 ntBASIC0.81□□□□□ -2.28
PDGFBP01127 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.81□□□□□ -2.28
PDGFBP01127 MIR6516-201ENST00000630554 81 ntBASIC0.81□□□□□ -2.28
PDGFBP01127 Y_RNA.7-201ENST00000362352 102 ntBASIC0.8□□□□□ -2.28
PDGFBP01127 Y_RNA.91-201ENST00000363042 107 ntBASIC0.8□□□□□ -2.28
PDGFBP01127 SNORD115-28-201ENST00000363931 81 ntBASIC0.8□□□□□ -2.28
PDGFBP01127 Y_RNA.242-201ENST00000364473 110 ntBASIC0.8□□□□□ -2.28
PDGFBP01127 RNA5SP127-201ENST00000411051 133 ntBASIC0.8□□□□□ -2.28
PDGFBP01127 RNU6-847P-201ENST00000411115 108 ntBASIC0.8□□□□□ -2.28
PDGFBP01127 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.8□□□□□ -2.28
PDGFBP01127 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.8□□□□□ -2.28
PDGFBP01127 RNU6-1299P-201ENST00000516316 100 ntBASIC0.8□□□□□ -2.28
PDGFBP01127 RNA5SP255-201ENST00000516370 107 ntBASIC0.8□□□□□ -2.28
PDGFBP01127 MIR2909-201ENST00000617113 69 ntBASIC0.8□□□□□ -2.28
PDGFBP01127 7SK.10-201ENST00000621414 298 ntBASIC0.8□□□□□ -2.28
PDGFBP01127 Y_RNA.288-201ENST00000364854 92 ntBASIC0.79□□□□□ -2.28
PDGFBP01127 RNU6-1138P-201ENST00000365359 106 ntBASIC0.79□□□□□ -2.28
PDGFBP01127 MIR1302-7-201ENST00000408841 72 ntBASIC0.79□□□□□ -2.28
PDGFBP01127 AL118496.2-201ENST00000448300 230 ntBASIC0.79□□□□□ -2.28
PDGFBP01127 SNRPGP8-201ENST00000454064 226 ntBASIC0.79□□□□□ -2.28
PDGFBP01127 RNU6-561P-201ENST00000516222 102 ntBASIC0.79□□□□□ -2.28
PDGFBP01127 SNORD36C-201ENST00000516733 66 ntBASIC0.79□□□□□ -2.28
PDGFBP01127 AC004812.1-201ENST00000540773 146 ntBASIC0.79□□□□□ -2.28
PDGFBP01127 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
PDGFBP01127 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.78□□□□□ -2.28
PDGFBP01127 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
PDGFBP01127 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.78□□□□□ -2.28
PDGFBP01127 Y_RNA.76-201ENST00000362931 109 ntBASIC0.78□□□□□ -2.28
PDGFBP01127 Y_RNA.82-201ENST00000363000 102 ntBASIC0.78□□□□□ -2.28
PDGFBP01127 Y_RNA.92-201ENST00000363043 102 ntBASIC0.78□□□□□ -2.28
PDGFBP01127 Y_RNA.235-201ENST00000364412 102 ntBASIC0.78□□□□□ -2.28
PDGFBP01127 Y_RNA.306-201ENST00000365015 102 ntBASIC0.78□□□□□ -2.28
PDGFBP01127 Y_RNA.308-201ENST00000365043 101 ntBASIC0.78□□□□□ -2.28
PDGFBP01127 Y_RNA.312-201ENST00000365089 102 ntBASIC0.78□□□□□ -2.28
PDGFBP01127 Y_RNA.322-201ENST00000365151 102 ntBASIC0.78□□□□□ -2.28
PDGFBP01127 AC015818.7-201ENST00000428754 109 ntBASIC0.78□□□□□ -2.28
PDGFBP01127 AC087499.7-201ENST00000441958 109 ntBASIC0.78□□□□□ -2.28
PDGFBP01127 Y_RNA.650-201ENST00000459002 102 ntBASIC0.78□□□□□ -2.28
PDGFBP01127 Y_RNA.777-201ENST00000516982 102 ntBASIC0.78□□□□□ -2.28
PDGFBP01127 AP003716.2-201ENST00000528260 108 ntBASIC0.78□□□□□ -2.28
PDGFBP01127 Y_RNA.771-201ENST00000598668 102 ntBASIC0.78□□□□□ -2.28
PDGFBP01127 Y_RNA.789-201ENST00000622480 102 ntBASIC0.78□□□□□ -2.28
PDGFBP01127 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.78□□□□□ -2.28
PDGFBP01127 MIR335-201ENST00000362173 94 ntBASIC0.77□□□□□ -2.29
PDGFBP01127 Y_RNA.37-201ENST00000362606 108 ntBASIC0.77□□□□□ -2.29
PDGFBP01127 RNU6-923P-201ENST00000364753 107 ntBASIC0.77□□□□□ -2.29
PDGFBP01127 RNU6-396P-201ENST00000365369 105 ntBASIC0.77□□□□□ -2.29
PDGFBP01127 RNU6-1335P-201ENST00000365426 107 ntBASIC0.77□□□□□ -2.29
PDGFBP01127 RNU6-574P-201ENST00000384265 107 ntBASIC0.77□□□□□ -2.29
PDGFBP01127 RNU6-35P-201ENST00000384530 107 ntBASIC0.77□□□□□ -2.29
PDGFBP01127 Y_RNA.537-201ENST00000384626 109 ntBASIC0.77□□□□□ -2.29
PDGFBP01127 MIR518F-201ENST00000384973 87 ntBASIC0.77□□□□□ -2.29
PDGFBP01127 MIR568-201ENST00000385036 95 ntBASIC0.77□□□□□ -2.29
PDGFBP01127 MIR605-201ENST00000385078 83 ntBASIC0.77□□□□□ -2.29
PDGFBP01127 RNU6-493P-201ENST00000391321 108 ntBASIC0.77□□□□□ -2.29
PDGFBP01127 AC090844.1-201ENST00000422019 156 ntBASIC0.77□□□□□ -2.29
PDGFBP01127 AC098934.3-201ENST00000430450 190 ntBASIC0.77□□□□□ -2.29
PDGFBP01127 AF228730.3-201ENST00000436691 102 ntBASIC0.77□□□□□ -2.29
PDGFBP01127 SNORD127-201ENST00000458892 86 ntBASIC0.77□□□□□ -2.29
PDGFBP01127 AP003484.1-201ENST00000530974 250 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 196.6 ms